Factsheet for GSMUA_Achr2P01130_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, golgi

Predictor Summary:

plastid 2
extracellular 4
golgi 4
plasma membrane 3
endoplasmic reticulum 3
vacuole 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
MultiLoc:	extracellular
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr7P19560_001	plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G06970.1	GSMUA_Achr7P19560_001	AT2G18960.1	24163289

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH13324	Soybean	cytosol	30.84	75.57
VIT_13s0084g00630.t01	Wine grape	cytosol	71.65	20.43
Bra009303.1-P	Field mustard	cytosol, peroxisome, plastid	67.29	20.06
CDX69997	Canola	cytosol, peroxisome, plastid	67.29	20.02
CDX99020	Canola	cytosol, peroxisome, plastid	67.29	19.87
AT5G06970.1	Thale cress	cytosol	66.67	19.44
Solyc01g096540.2.1	Tomato	cytosol, plastid	66.67	19.28
KRH20669	Soybean	endoplasmic reticulum	65.73	19.15
KRH13315	Soybean	cytosol, endoplasmic reticulum, nucleus	65.42	19.02
GSMUA_Achr11P...	Banana	cytosol	38.01	10.5
GSMUA_Achr4P08290_001	Banana	cytosol	25.86	10.41
GSMUA_Achr1P10950_001	Banana	cytosol	27.73	9.55
GSMUA_Achr6P26320_001	Banana	cytosol	24.3	8.91
GSMUA_AchrUn_...	Banana	cytosol	24.3	8.91
GSMUA_Achr3P16260_001	Banana	cytosol, mitochondrion	24.3	8.82
GSMUA_Achr4P29190_001	Banana	cytosol	22.43	8.28
GSMUA_Achr4P15490_001	Banana	golgi, plasma membrane	23.05	7.84
GSMUA_Achr1P16870_001	Banana	cytosol	21.18	7.52
GSMUA_Achr1P03530_001	Banana	cytosol	20.56	7.46
PGSC0003DMT400004282	Potato	extracellular	4.67	5.77
GSMUA_Achr2P01140_001	Banana	cytosol	4.67	1.84
GSMUA_Achr9P06130_001	Banana	nucleus	0.93	1.65
Solyc02g071830.1.1	Tomato	endoplasmic reticulum, extracellular	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr2P01130_001	EnsemblPlants:GSMUA_Achr2T01130_001	EnsemblPlantsGene:GSMUA_Achr2G01130_001	InterPro:DUF810	InterPro:IPR014772	InterPro:Munc13_dom-2
PANTHER:PTHR31280	PANTHER:PTHR31280:SF2	PFAM:PF05664	PFscan:PS51259	SEG:seg	SignalP:SignalP-noTM
UniParc:UPI0002967F9A	UniProt:M0S454	MapMan:35.1	:	:	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr2G01130_001]

Coordinates

chr2:-:6383610..6393351

Molecular Weight (calculated)

36718.8 Da

IEP (calculated)

9.672

GRAVY (calculated)

-0.190

Length

321 amino acids

Sequence
(BLAST)

001: MVGHMWKLSL LVSLKLISIN KEDLIPPEPV LTRYRKETGI KAFVKKEVTE IRLIDEKKSY QINSLTTIKL CVRLNTLHYA ITQLNKLEDS IQERWTRKKP
101: ENFIIRRSMN EKSISFKVNQ KNAFDGSRKD INAAIDRICE FSGTKIIFWD LREPFIENLY KHNVPQARLE VLIDAFDVVL NQLCDVIVEP LRDRIVTGLL
201: QASLDGLLRV ILDGGPSRIF LSSDAKFIED DLEILKEFFI SGGDGLPRGT VENLVARVRP VITLLSYETR VLIDDLKDVS QGGRSKFGAD SKTLLRILCH
301: RSDSEASQFL KKQFKIPKSS S

Best Arabidopsis Sequence Match ( AT5G06970.1 )
(BLAST)

0001: MEEENAVEIL QRYRRDRRKL LDFMLAGSLI KKVIMPPGAV TLDDVDLDQV SVDYVINCAK KGGMLELAEA IRDYHDHIGL PYMNSVGTAD EFFLATIPES
0101: SGSPPKRAPP PIPVLISSSS PMVTNPEWCE SPSAPPLMRS ESFDSPKAQE LTVDDIDDFE DDDDLDEVGN FRISRRTAND AADLVPRLPS FATGITDDDL
0201: RETAFEILLA CAGASGGLIV PSKEKKKEKS RSRLIKKLGR KSESVSQSQS SSGLVSLLEM MRGQMEISEA MDIRTRQGLL NALAGKVGKR MDSLLVPLEL
0301: LCCVSRTEFS DKKAYLRWQK RQLNMLAEGL INNPVVGFGE SGRKATDLKS LLLRIEESES LPSSAGEVQR AECLKSLREV AISLAERPAR GDLTGEVCHW
0401: ADGYHLNVRL YEKLLLCVFD ILNDGKLTEE VEEILELLKS TWRVLGITET IHYTCYAWVL FRQYVITSER GLLRHAIQQL KKIPLKEQRG PQERLHLKTL
0501: KCRVDNEEIS FLESFLSPIR SWADKQLGDY HLHFAEGSLV MEDTVTVAMI TWRLLLEESD RAMHSNSSDR EQIESYVLSS IKNTFTRMSL AIDRSDRNNE
0601: HHLALLAEET KKLMKKDSTI FMPILSQRHP QAIAFSASLI HKLYGNKLKP FLDGAEHLTE DAVSVFPAAD SLEQYLLELM TSVCGEDTSG PYFKKLIPYE
0701: VESLSGTLVL RWINSQLGRI LSWVERAYKQ EHWDPISPQQ RYGSSIVEVF RIVEETVDQF FALKVPMRSI ELSALFRGID NAFQVYTNHV MEKLASKDDL
0801: VPPVPVLTRY KKETAIKVFV KKELFDSKHL DERRSINIDV PATAMLCVQL NTLHYAVSQL SKLEDSMWLR WIAKKPREKI VIRKSMVEKS KSFNQKESFE
0901: GSRKDINAAL DRICEFTGTK IIFCDLREPF IENLYKPNVS QSRLEGLIEA LDTELGQLCS VIMEPLRDRI VTSLLQASLD GLLRVLLDGG ASRVFHPSES
1001: KLLEEDVEVL KEFFISGGDG LPRGVVENQV ARVRLVVKLH GYETRELIDD LRSRSSLEMQ QGGKGKLGAD TQTLVRVLCH RNDSEASQFL KKQYKIPRSH
1101: G

Arabidopsis Description

PATROL1Protein unc-13 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q8RX56]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.