Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P26320_001 | Banana | cytosol | 79.67 | 16.57 |
| GSMUA_Achr3P16260_001 | Banana | cytosol, mitochondrion | 75.82 | 15.61 |
| GSMUA_Achr4P08290_001 | Banana | cytosol | 59.89 | 13.68 |
| GSMUA_Achr4P15490_001 | Banana | golgi, plasma membrane | 61.54 | 11.86 |
| GSMUA_Achr4P29190_001 | Banana | cytosol | 34.07 | 7.13 |
| GSMUA_Achr1P03530_001 | Banana | cytosol | 34.62 | 7.12 |
| GSMUA_Achr1P16870_001 | Banana | cytosol | 31.87 | 6.42 |
| GSMUA_AchrUn_... | Banana | cytosol | 29.12 | 6.06 |
| GSMUA_Achr2P01140_001 | Banana | cytosol | 23.08 | 5.16 |
| GSMUA_Achr1P10950_001 | Banana | cytosol | 26.37 | 5.15 |
| GSMUA_Achr11P... | Banana | cytosol | 21.43 | 3.36 |
| HORVU2Hr1G127720.4 | Barley | cytosol | 1.1 | 1.23 |
| GSMUA_Achr2P01130_001 | Banana | extracellular, golgi | 1.65 | 0.93 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P06130_001 | EnsemblPlants:GSMUA_Achr9T06130_001 | EnsemblPlantsGene:GSMUA_Achr9G06130_001 | InterPro:DUF810 | PANTHER:PTHR31280 | PANTHER:PTHR31280:SF15 |
| PFAM:PF05664 | UniParc:UPI000295A942 | UniProt:M0TXX2 | MapMan:35.2 | : | : |
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G06130_001]
Coordinates
chr9:-:3931429..3933445
Molecular Weight (calculated)
20580.4 Da
IEP (calculated)
6.804
GRAVY (calculated)
-0.453
Length
182 amino acids
Sequence
(BLAST)
(BLAST)
001: MRVSERTDSR TRKGLLRDSF GRCVESMVLP LELLQQFNTS DFPDQQEYEA DTVSLEAGLL VHPLLPSEKA DTVSQWLRQI IASNIENFQG IILLGVPAAK
101: ILVEDISNEY HHKRREETDV ARSRVDTYIQ SSLRTAFVQR MELADSGRLS SKNQNTSTPV LSILSKGIGE VARKEKSRSV QY
101: ILVEDISNEY HHKRREETDV ARSRVDTYIQ SSLRTAFVQR MELADSGRLS SKNQNTSTPV LSILSKGIGE VARKEKSRSV QY
001: MAHLFRELSL GHSKRESTPP PPSHSATSRS SSMSSDLPPS PLGQLAVQLS DSDLRLTAYE IFVAACRSAT GKPLSSAVSV AVLNQDSPNG SPASPAIQRS
101: LTSTAASKMK KALGLRSSSS LSPGSNKSSG SASGSNGKSK RPTTVGELMR IQMRVSEAVD SRVRRAFLRI AASQVGRKIE SVVLPLELLQ QLKSSDFTDQ
201: QEYDAWLKRS LKVLEAGLLL HPRVPLDKTN SSQRLRQIIH GALDRPLETG RNNEQMQSLR SAVMSLATRS DGSFSDSCHW ADGSPFNLRL YELLLEACFD
301: SNDATSMVEE VDDLMEHIKK TWVILGINQM LHNLCFTWLL FSRYVVTGQV EMDLLHACDS QLAEVAKDAK TTKDPEYSQV LSSTLSAILG WAEKRLLAYH
401: DTFDRGNIHT MEGIVSLGVS AARILVEDIS NEYRRRRKGE VDVARTRIET YIRSSLRTSF AQRMEKADSS RRASRNQKNP LPVLAILAKD IGELAIQEKR
501: MFSPILKRWH PFAAGVAVAT LHVCYGNEIK QFIAGISELT PDAVQILRAA DKLEKDLVQI AVEDSVDSDD GGKAIIREMP PFEAETVIAN LVKDWIKARI
601: DRLKEWVDRN LQQEVWKPLE NLEGGYAQSA AEVLRITDET LEAFFQLPIP MHPAVLPDLI IGLDKYLQYY VSKAKSGCGS RTTYMPTMPA LTRCTTGSKF
701: QWKKKEKTPT TQKRESQVSV MNGENSFGVT QICVRINSLH KIRSELDVVE KRVITHLRNC ESAHTDDFSN GLEKKFELTP AACIEGVQQL SESLAYKVVF
801: HDLSHTLWDG LYIGDLSSSR IDPFLKELEQ NLTVIAETVH ERVRTRIITD IMRASLDGFL LVLLAGGPSR AFTRQDSQIM EEDFKSMKDM FWANGDGLAM
901: DLIDKFSTTV RGVLPLFSTD TDSLIERFKG TTLEAYGSSA KSRLPLPPTS GQWNGMEPNT LLRVLCYRND ESATRFLKKT YNLPKKL
101: LTSTAASKMK KALGLRSSSS LSPGSNKSSG SASGSNGKSK RPTTVGELMR IQMRVSEAVD SRVRRAFLRI AASQVGRKIE SVVLPLELLQ QLKSSDFTDQ
201: QEYDAWLKRS LKVLEAGLLL HPRVPLDKTN SSQRLRQIIH GALDRPLETG RNNEQMQSLR SAVMSLATRS DGSFSDSCHW ADGSPFNLRL YELLLEACFD
301: SNDATSMVEE VDDLMEHIKK TWVILGINQM LHNLCFTWLL FSRYVVTGQV EMDLLHACDS QLAEVAKDAK TTKDPEYSQV LSSTLSAILG WAEKRLLAYH
401: DTFDRGNIHT MEGIVSLGVS AARILVEDIS NEYRRRRKGE VDVARTRIET YIRSSLRTSF AQRMEKADSS RRASRNQKNP LPVLAILAKD IGELAIQEKR
501: MFSPILKRWH PFAAGVAVAT LHVCYGNEIK QFIAGISELT PDAVQILRAA DKLEKDLVQI AVEDSVDSDD GGKAIIREMP PFEAETVIAN LVKDWIKARI
601: DRLKEWVDRN LQQEVWKPLE NLEGGYAQSA AEVLRITDET LEAFFQLPIP MHPAVLPDLI IGLDKYLQYY VSKAKSGCGS RTTYMPTMPA LTRCTTGSKF
701: QWKKKEKTPT TQKRESQVSV MNGENSFGVT QICVRINSLH KIRSELDVVE KRVITHLRNC ESAHTDDFSN GLEKKFELTP AACIEGVQQL SESLAYKVVF
801: HDLSHTLWDG LYIGDLSSSR IDPFLKELEQ NLTVIAETVH ERVRTRIITD IMRASLDGFL LVLLAGGPSR AFTRQDSQIM EEDFKSMKDM FWANGDGLAM
901: DLIDKFSTTV RGVLPLFSTD TDSLIERFKG TTLEAYGSSA KSRLPLPPTS GQWNGMEPNT LLRVLCYRND ESATRFLKKT YNLPKKL
Arabidopsis Description
Elongation factor Ts (DUF810) [Source:UniProtKB/TrEMBL;Acc:Q0WQB7]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.