Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69997 | Canola | cytosol, peroxisome, plastid | 98.62 | 99.35 |
| AT5G06970.1 | Thale cress | cytosol | 92.55 | 91.37 |
| KRH13324 | Soybean | cytosol | 9.02 | 74.81 |
| KRH13315 | Soybean | cytosol, endoplasmic reticulum, nucleus | 70.65 | 69.57 |
| KRH20669 | Soybean | endoplasmic reticulum | 70.47 | 69.51 |
| VIT_13s0084g00630.t01 | Wine grape | cytosol | 70.56 | 68.12 |
| GSMUA_Achr2P01130_001 | Banana | extracellular, golgi | 19.87 | 67.29 |
| Solyc01g096540.2.1 | Tomato | cytosol, plastid | 68.63 | 67.21 |
| Os03t0683700-02 | Rice | plasma membrane | 15.36 | 64.23 |
| HORVU2Hr1G041780.2 | Barley | cytosol | 31.65 | 63.94 |
| GSMUA_Achr2P01140_001 | Banana | cytosol | 47.19 | 63.02 |
| KXG21868 | Sorghum | cytosol | 64.03 | 62.93 |
| HORVU2Hr1G041800.16 | Barley | cytosol | 25.02 | 62.82 |
| TraesCS2D01G215400.1 | Wheat | nucleus | 63.11 | 61.97 |
| TraesCS1A01G052200.3 | Wheat | cytosol, mitochondrion, nucleus | 62.93 | 61.84 |
| TraesCS1B01G069300.2 | Wheat | nucleus | 62.65 | 60.53 |
| Zm00001d037867_P001 | Maize | cytosol | 63.94 | 59.45 |
| PGSC0003DMT400004282 | Potato | extracellular | 10.03 | 41.92 |
| Solyc02g071830.1.1 | Tomato | endoplasmic reticulum, extracellular | 11.68 | 35.38 |
| CDX86760 | Canola | cytosol | 32.57 | 31.64 |
| CDY59387 | Canola | cytosol | 17.2 | 30.21 |
| CDY40469 | Canola | cytosol | 25.76 | 29.44 |
| CDY35919 | Canola | cytosol | 25.67 | 29.31 |
| CDX77008 | Canola | cytosol | 25.39 | 27.85 |
| CDY35337 | Canola | cytosol | 25.11 | 27.8 |
| CDY59176 | Canola | cytosol | 24.66 | 27.6 |
| CDY53192 | Canola | cytosol | 24.66 | 27.6 |
| CDY37722 | Canola | mitochondrion | 23.0 | 27.38 |
| CDX84688 | Canola | cytosol | 24.56 | 26.86 |
| CDX79528 | Canola | cytosol | 24.47 | 26.79 |
| CDX89822 | Canola | cytosol | 25.11 | 26.63 |
| CDY18234 | Canola | cytosol | 25.02 | 26.54 |
| CDY23738 | Canola | cytosol | 24.29 | 26.48 |
Protein Annotations
| EnsemblPlants:CDX99020 | EnsemblPlantsGene:GSBRNA2T00107146001 | InterPro:DUF810 | InterPro:IPR014770 | InterPro:IPR014772 | InterPro:Munc13_1 |
| InterPro:Munc13_dom-2 | PANTHER:PTHR31280 | PANTHER:PTHR31280:SF2 | PFAM:PF05664 | PFscan:PS51258 | PFscan:PS51259 |
| ProteinID:CDX99020 | ProteinID:CDX99020.1 | SEG:seg | UniParc:UPI0004EE3DF3 | MapMan:21.1.1.3.2 | : |
Description
BnaC09g48150D
Coordinates
chrLK031907:+:1168398..1175887
Molecular Weight (calculated)
122355.0 Da
IEP (calculated)
5.833
GRAVY (calculated)
-0.283
Length
1087 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLAGSLIKKV IMPPGAVTLD DVDLDQVSVD YVINCAKKGG MLELSEAIRD YHDHSGLPYM NSVGTADDFF LATTPESSGS PPKRAPPPIP ILTSASSSSI
0101: PTNPEWCESP SAPPLMRSES IDSPHAHELT VDDIEDFEDD DDNEEVGNFR ISRRTASDAA DLVPKLPSFA TGNNCKLIGS ITDDDLRETA FEILLACAGA
0201: SGGLIVPSKE KKNEKRRSRL IKKLGRKSES VSQSQSSSGL VSLLEMMRGQ MEISEAMDIR TRQGLLNALA GKAGKRMDSL LVPLELLCCV SRTEFSDKKA
0301: YLRWQKRQLN MLAEGLINHP VVGFGESGCK ANDLKSLLQR IEESESLPSS AGEVQRAECL KSLTEVAISL AERPARGDLT GEVCHWADGY HLNVRLYEKL
0401: LLCVFDMLNE GKLTEEVEEI LELLKSTWRV LGITETIHYT CYAWVLFRQY VITSERGLLR HAIQQLKKIP LKEQRGPQER IHLKTLQCRV ENEEISFLES
0501: FLSPIRSWAD KQLGDYHLHF AEGSLVMEDT VTVAMITWRL LLEESDRAMH SSSSDREQIE SYISSSIKNT FTRMSLTIDR SDRINEHPLA LLAEETKKLM
0601: KKDSTIFMPI LSQRHPQAIA FSASLIHKFY GNKLKPFLDG TEHLTEDVVS VFPPADSLEQ YLLELMTSVC GEDTNGPYFR KLIPYELESL SGTLVLRWIN
0701: AQLGRILSWV ERAFKQEHWD PISPQQRHGS SIVEVFRIAE ETVDQFFELK VPMRSIELSA LLRGIDNAFQ VYTNHVMEKL GSKDDLVPPV PVLTRYKKEA
0801: AIKVFVKKEL FESKLPDERW STNIDVPATA VLCVQLNTLH YAVSQLSKLE DSIWERWIAK RPREKIVIRK SLVEKTKSVN QKESFEGSRK DINAALDRIC
0901: EFTGTKIIFC DLREPFIENL YKPSVSQSRL EALIEALDTE LGQLCSVIME PLRDRIVTSL LQASLDGLLR VLLDGGPSRV FHPSESKLLE EDVEVLKEFF
1001: ISGGDGLPRG VVENQIARVR LVVKLHGYET RELIDDLRSR SSLDMQQGGR GKLGADTQTL VRVLCHRNDS EASLFLKKQY KIPKSHA
0101: PTNPEWCESP SAPPLMRSES IDSPHAHELT VDDIEDFEDD DDNEEVGNFR ISRRTASDAA DLVPKLPSFA TGNNCKLIGS ITDDDLRETA FEILLACAGA
0201: SGGLIVPSKE KKNEKRRSRL IKKLGRKSES VSQSQSSSGL VSLLEMMRGQ MEISEAMDIR TRQGLLNALA GKAGKRMDSL LVPLELLCCV SRTEFSDKKA
0301: YLRWQKRQLN MLAEGLINHP VVGFGESGCK ANDLKSLLQR IEESESLPSS AGEVQRAECL KSLTEVAISL AERPARGDLT GEVCHWADGY HLNVRLYEKL
0401: LLCVFDMLNE GKLTEEVEEI LELLKSTWRV LGITETIHYT CYAWVLFRQY VITSERGLLR HAIQQLKKIP LKEQRGPQER IHLKTLQCRV ENEEISFLES
0501: FLSPIRSWAD KQLGDYHLHF AEGSLVMEDT VTVAMITWRL LLEESDRAMH SSSSDREQIE SYISSSIKNT FTRMSLTIDR SDRINEHPLA LLAEETKKLM
0601: KKDSTIFMPI LSQRHPQAIA FSASLIHKFY GNKLKPFLDG TEHLTEDVVS VFPPADSLEQ YLLELMTSVC GEDTNGPYFR KLIPYELESL SGTLVLRWIN
0701: AQLGRILSWV ERAFKQEHWD PISPQQRHGS SIVEVFRIAE ETVDQFFELK VPMRSIELSA LLRGIDNAFQ VYTNHVMEKL GSKDDLVPPV PVLTRYKKEA
0801: AIKVFVKKEL FESKLPDERW STNIDVPATA VLCVQLNTLH YAVSQLSKLE DSIWERWIAK RPREKIVIRK SLVEKTKSVN QKESFEGSRK DINAALDRIC
0901: EFTGTKIIFC DLREPFIENL YKPSVSQSRL EALIEALDTE LGQLCSVIME PLRDRIVTSL LQASLDGLLR VLLDGGPSRV FHPSESKLLE EDVEVLKEFF
1001: ISGGDGLPRG VVENQIARVR LVVKLHGYET RELIDDLRSR SSLDMQQGGR GKLGADTQTL VRVLCHRNDS EASLFLKKQY KIPKSHA
0001: MEEENAVEIL QRYRRDRRKL LDFMLAGSLI KKVIMPPGAV TLDDVDLDQV SVDYVINCAK KGGMLELAEA IRDYHDHIGL PYMNSVGTAD EFFLATIPES
0101: SGSPPKRAPP PIPVLISSSS PMVTNPEWCE SPSAPPLMRS ESFDSPKAQE LTVDDIDDFE DDDDLDEVGN FRISRRTAND AADLVPRLPS FATGITDDDL
0201: RETAFEILLA CAGASGGLIV PSKEKKKEKS RSRLIKKLGR KSESVSQSQS SSGLVSLLEM MRGQMEISEA MDIRTRQGLL NALAGKVGKR MDSLLVPLEL
0301: LCCVSRTEFS DKKAYLRWQK RQLNMLAEGL INNPVVGFGE SGRKATDLKS LLLRIEESES LPSSAGEVQR AECLKSLREV AISLAERPAR GDLTGEVCHW
0401: ADGYHLNVRL YEKLLLCVFD ILNDGKLTEE VEEILELLKS TWRVLGITET IHYTCYAWVL FRQYVITSER GLLRHAIQQL KKIPLKEQRG PQERLHLKTL
0501: KCRVDNEEIS FLESFLSPIR SWADKQLGDY HLHFAEGSLV MEDTVTVAMI TWRLLLEESD RAMHSNSSDR EQIESYVLSS IKNTFTRMSL AIDRSDRNNE
0601: HHLALLAEET KKLMKKDSTI FMPILSQRHP QAIAFSASLI HKLYGNKLKP FLDGAEHLTE DAVSVFPAAD SLEQYLLELM TSVCGEDTSG PYFKKLIPYE
0701: VESLSGTLVL RWINSQLGRI LSWVERAYKQ EHWDPISPQQ RYGSSIVEVF RIVEETVDQF FALKVPMRSI ELSALFRGID NAFQVYTNHV MEKLASKDDL
0801: VPPVPVLTRY KKETAIKVFV KKELFDSKHL DERRSINIDV PATAMLCVQL NTLHYAVSQL SKLEDSMWLR WIAKKPREKI VIRKSMVEKS KSFNQKESFE
0901: GSRKDINAAL DRICEFTGTK IIFCDLREPF IENLYKPNVS QSRLEGLIEA LDTELGQLCS VIMEPLRDRI VTSLLQASLD GLLRVLLDGG ASRVFHPSES
1001: KLLEEDVEVL KEFFISGGDG LPRGVVENQV ARVRLVVKLH GYETRELIDD LRSRSSLEMQ QGGKGKLGAD TQTLVRVLCH RNDSEASQFL KKQYKIPRSH
1101: G
0101: SGSPPKRAPP PIPVLISSSS PMVTNPEWCE SPSAPPLMRS ESFDSPKAQE LTVDDIDDFE DDDDLDEVGN FRISRRTAND AADLVPRLPS FATGITDDDL
0201: RETAFEILLA CAGASGGLIV PSKEKKKEKS RSRLIKKLGR KSESVSQSQS SSGLVSLLEM MRGQMEISEA MDIRTRQGLL NALAGKVGKR MDSLLVPLEL
0301: LCCVSRTEFS DKKAYLRWQK RQLNMLAEGL INNPVVGFGE SGRKATDLKS LLLRIEESES LPSSAGEVQR AECLKSLREV AISLAERPAR GDLTGEVCHW
0401: ADGYHLNVRL YEKLLLCVFD ILNDGKLTEE VEEILELLKS TWRVLGITET IHYTCYAWVL FRQYVITSER GLLRHAIQQL KKIPLKEQRG PQERLHLKTL
0501: KCRVDNEEIS FLESFLSPIR SWADKQLGDY HLHFAEGSLV MEDTVTVAMI TWRLLLEESD RAMHSNSSDR EQIESYVLSS IKNTFTRMSL AIDRSDRNNE
0601: HHLALLAEET KKLMKKDSTI FMPILSQRHP QAIAFSASLI HKLYGNKLKP FLDGAEHLTE DAVSVFPAAD SLEQYLLELM TSVCGEDTSG PYFKKLIPYE
0701: VESLSGTLVL RWINSQLGRI LSWVERAYKQ EHWDPISPQQ RYGSSIVEVF RIVEETVDQF FALKVPMRSI ELSALFRGID NAFQVYTNHV MEKLASKDDL
0801: VPPVPVLTRY KKETAIKVFV KKELFDSKHL DERRSINIDV PATAMLCVQL NTLHYAVSQL SKLEDSMWLR WIAKKPREKI VIRKSMVEKS KSFNQKESFE
0901: GSRKDINAAL DRICEFTGTK IIFCDLREPF IENLYKPNVS QSRLEGLIEA LDTELGQLCS VIMEPLRDRI VTSLLQASLD GLLRVLLDGG ASRVFHPSES
1001: KLLEEDVEVL KEFFISGGDG LPRGVVENQV ARVRLVVKLH GYETRELIDD LRSRSSLEMQ QGGKGKLGAD TQTLVRVLCH RNDSEASQFL KKQYKIPRSH
1101: G
Arabidopsis Description
PATROL1Protein unc-13 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q8RX56]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.