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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX89822 Canola cytosol 97.56 97.56
CDY53192 Canola cytosol 86.44 91.25
CDY59176 Canola cytosol 86.15 90.94
AT1G04470.1 Thale cress cytosol 87.8 86.96
CDY37722 Canola mitochondrion 73.66 82.69
CDY23738 Canola cytosol 79.32 81.54
CDX84688 Canola cytosol 78.93 81.39
CDX79528 Canola cytosol 78.83 81.37
VIT_05s0049g01560.t01 Wine grape nucleus 66.44 66.76
KRG92279 Soybean cytosol 63.12 63.93
KRH34531 Soybean cytosol 62.93 63.36
KRG90363 Soybean nucleus 62.24 62.73
KRH33633 Soybean nucleus 61.85 62.34
PGSC0003DMT400044198 Potato cytosol 60.39 60.75
Solyc09g090480.2.1 Tomato cytosol 59.9 60.26
PGSC0003DMT400034999 Potato cytosol 58.83 58.66
Solyc03g005630.2.1 Tomato cytosol 58.54 58.59
GSMUA_AchrUn_... Banana cytosol 48.78 57.14
GSMUA_Achr1P10950_001 Banana cytosol 50.93 56.01
GSMUA_Achr4P29190_001 Banana cytosol 46.73 55.06
KRH70255 Soybean plastid 57.85 54.4
GSMUA_Achr1P16870_001 Banana cytosol 47.61 53.98
Os10t0471000-01 Rice cytosol, mitochondrion 17.37 53.94
KRH08629 Soybean cytosol 57.46 53.74
GSMUA_Achr1P03530_001 Banana cytosol 46.34 53.67
OQU91659 Sorghum cytosol 37.56 50.86
TraesCS1B01G168300.2 Wheat cytosol 48.0 50.41
EER92892 Sorghum mitochondrion 51.22 50.1
TraesCS4B01G338200.1 Wheat mitochondrion 49.85 49.85
HORVU1Hr1G039810.1 Barley mitochondrion 47.9 49.8
TraesCS1D01G147700.1 Wheat mitochondrion 48.1 49.75
TraesCS1A01G150700.1 Wheat cytosol 48.0 49.65
TraesCS4D01G334500.1 Wheat mitochondrion 49.76 49.56
Zm00001d032737_P001 Maize cytosol 48.39 49.55
Os03t0138600-01 Rice nucleus, plasma membrane 47.8 49.0
TraesCS5A01G507900.1 Wheat mitochondrion 49.17 48.93
HORVU4Hr1G083660.3 Barley mitochondrion 49.07 48.84
Zm00001d027590_P001 Maize mitochondrion 49.66 48.66
Zm00001d010939_P004 Maize mitochondrion 42.44 42.98
EES18963 Sorghum mitochondrion 42.73 41.83
CDY35337 Canola cytosol 36.78 38.39
CDX77008 Canola cytosol 36.88 38.14
CDY35919 Canola cytosol 34.93 37.6
CDY40469 Canola cytosol 34.83 37.54
CDX69997 Canola cytosol, peroxisome, plastid 26.44 25.12
CDX99020 Canola cytosol, peroxisome, plastid 26.54 25.02
CDX86760 Canola cytosol 21.07 19.3
CDY59387 Canola cytosol 11.51 19.06
Protein Annotations
EnsemblPlants:CDY18234EnsemblPlantsGene:GSBRNA2T00002764001InterPro:DUF810InterPro:IPR014770InterPro:IPR014772InterPro:Munc13_1
InterPro:Munc13_dom-2PANTHER:PTHR31280PANTHER:PTHR31280:SF1PFAM:PF05664PFscan:PS51258PFscan:PS51259
ProteinID:CDY18234ProteinID:CDY18234.1SEG:segUniParc:UPI0004EE968BUniProt:A0A078FYJ2MapMan:35.1
Description
BnaC05g02570DBnaC05g02570D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FYJ2]
Coordinates
chrLK032083:-:452787..457251
Molecular Weight (calculated)
113695.0 Da
IEP (calculated)
7.202
GRAVY (calculated)
-0.291
Length
1025 amino acids
Sequence
(BLAST)
0001: MARHSRRESF SDTAASTVCP DTDLLWPFGK LDGLDKDEIR ETAYEIFFAA CRSSPGFGGR TALTFYSKHN GGDNEGDGLG GGGGSGSKVV TTPTSRVKRA
0101: LGLKMLKRSP SRRMTTAAGA ASAPSSPGNG SSIGASGHIS PGAGFLTVPP SRPRRPLTSA EIMRQQMRVT EQGDTRLRKT LTRTLVGQTG KRAETIILPL
0201: ELLRHVKTSE FSEVHEYQIW QRRQLKVTEA GLLLHPSIPL EKTNNFAMRL REVIRQSETK PIDTGKTSET MATLCNVVIS LACRNTNTTA SDVCHWADGY
0301: PLNIHLYVAL LQSIFDVRDE TLVLDEIDEL LELMKKTWSM LGITRPVHNL CFTWVLFHQY IVTSQMEPDL LGASHAMLAE VANDAKKSDR EALYVKLLTS
0401: TLASMQGWTE KRLLSYHDYF QRGNVGLIEN LLPLALSSSR IVGEDVTISQ GSSQEKGDVK LVDSSGERVD YYIRASIKNA FSKVTENMKD NVSATEEGEE
0501: AAKMLLQLAK ETEDLALRER ECFSPILKRW YSVAAGVASV SVHQCYGSVL MQYLAGRSSI TKETVEVLQT AGKLEKVLVQ MVAEDSEECE DGGKGLVREM
0601: VPYEVESIIL RLLKQWIDEK LKTVQECLSR AKEAETWNPK SKSEPYAQSA GELMKLANDA IAEFFEVPIG ITEDLVHDLA EGLEQLFQEY TTFVASCGSK
0701: QSYIPTLPPL TRCNRDSKFV KLLKKATPCT ASGEDLNSLS GGALGISDGH HPRPSTSRGT QRLYIRLNTL HFLSSQLHSL NKSLSLNPSV LPATRKRHRE
0801: RTSSSSSSYF DSTQAGIETA FHHVSEVAAY RLIFLDSYSV FYERLYVGDV ANARIKPALR ILKQNLTLMT AILADRAQAL AMREVMKASF EVVLTILLAG
0901: GHSRVFYRAD HEMIEEDFES LKKVYCTCGE GLIPEEVVDR EAETVEGVVQ LMSQPTEQLV EDFSIATCEA SGMGLVGTGQ RLPMPPTTGR WNRSDPNTIL
1001: RVLCYRDDRV ANQFLKKSFQ LGRRR
Best Arabidopsis Sequence Match ( AT1G04470.1 )
(BLAST)
0001: MVRHSRRESF FDMVGFEVCP DTDLLWPFGK LDGLDRDEIR ETAYEIFFAA CRSSPGFGGR NALTFYSKHN AGDHQGDGIG GGGGSGSSNG SGFGSLGRKE
0101: VLTTPTSRVK RALGLKMLKR SPSRRMSTVG TVVGAVSAPS SPGNNGSIGS GSGHFSPGAG FFTVPPARPR RPLTSAEIMR QQMKVTEQSD TRLRKTLMRT
0201: LVGQTGRRAE TIILPLELLR HVKPSEFGDV HEYQIWQRRQ LKVLEAGLLI HPSIPLEKTN NFAMRLREII RQSETKAIDT SKNSDIMPTL CNLVASLSWR
0301: NATPTTDICH WADGYPLNIH LYVALLQSIF DIRDETLVLD EIDELLELMK KTWIMLGITR AIHNLCFTWV LFHQYIVTSQ MEPDLLGASH AMLAEVANDA
0401: KKSDREALYV KLLTSTLASM QGWTEKRLLS YHDYFQRGNV GLIENLLPLA LSSSKILGED VTISQMNGLE KGDVKLVDSS GDRVDYYIRA SIKNAFSKVI
0501: ENMKAEIEET EEGEEEAATM LLRLAKETED LALRESECFS PILKRWHLVA AGVASVSLHQ CYGSILMQYL AGRSTITKET VEVLQTAGKL EKVLVQMVAE
0601: NSDECEDGGK GLVREMVPYE VDSIILRLLR QWIEEKLQTV QECLSRAKEA ETWNPKSKSE PYAQSAGELM KLANDAIEEF FEIPIGITED LVHDLAEGLE
0701: KLFQEYTTFV ASCGSKQSYI PTLPPLTRCN RDSKFVKLWK KATPCAASGE ELNQMGEAPG GNHPRPSTSR GTQRLYIRLN TLHFLSSQLH SLNKSLSLNP
0801: RVLPATRKRC RERTKSSSYF EFTQAGIESA CQHVSEVAAY RLIFLDSYSV FYESLYPGDV ANGRIKPALR ILKQNLTLMT AILADKAQAL AMKEVMKASF
0901: EVVLTVLLAG GHSRVFCRTD HDLIEEDFES LKKVYCTCGE GLIPEEVVDR EAETVEGVIQ LMGQPTEQLM EDFSIVTCES SGMGLVGTGQ KLPMPPTTGR
1001: WNRSDPNTIL RVLCYRDDRV ANQFLKKSFQ LGKRR
Arabidopsis Description
F19P19.6 protein [Source:UniProtKB/TrEMBL;Acc:P93812]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.