Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX84688 | Canola | cytosol | 96.78 | 96.68 |
| Bra022939.1-P | Field mustard | cytosol | 98.89 | 94.79 |
| CDY37722 | Canola | mitochondrion | 83.38 | 90.69 |
| CDY23738 | Canola | cytosol | 89.22 | 88.87 |
| AT2G33420.1 | Thale cress | cytosol | 90.84 | 86.81 |
| CDY53192 | Canola | cytosol | 80.66 | 82.49 |
| CDY59176 | Canola | cytosol | 80.26 | 82.08 |
| CDX89822 | Canola | cytosol | 81.47 | 78.93 |
| CDY18234 | Canola | cytosol | 81.37 | 78.83 |
| VIT_05s0049g01560.t01 | Wine grape | nucleus | 66.36 | 64.61 |
| KRG92279 | Soybean | cytosol | 63.54 | 62.35 |
| KRG90363 | Soybean | nucleus | 63.24 | 61.75 |
| KRH34531 | Soybean | cytosol | 62.94 | 61.39 |
| KRH33633 | Soybean | nucleus | 62.84 | 61.36 |
| PGSC0003DMT400044198 | Potato | cytosol | 60.32 | 58.78 |
| Solyc09g090480.2.1 | Tomato | cytosol | 59.92 | 58.39 |
| Solyc03g005630.2.1 | Tomato | cytosol | 59.62 | 57.81 |
| PGSC0003DMT400034999 | Potato | cytosol | 59.72 | 57.68 |
| GSMUA_AchrUn_... | Banana | cytosol | 49.95 | 56.69 |
| GSMUA_Achr1P10950_001 | Banana | cytosol | 52.37 | 55.79 |
| GSMUA_Achr4P29190_001 | Banana | cytosol | 48.24 | 55.06 |
| Os10t0471000-01 | Rice | cytosol, mitochondrion | 17.93 | 53.94 |
| GSMUA_Achr1P03530_001 | Banana | cytosol | 47.63 | 53.45 |
| KRH70255 | Soybean | plastid | 58.31 | 53.12 |
| GSMUA_Achr1P16870_001 | Banana | cytosol | 48.24 | 52.99 |
| KRH08629 | Soybean | cytosol | 58.41 | 52.92 |
| OQU91659 | Sorghum | cytosol | 38.47 | 50.46 |
| TraesCS1B01G168300.2 | Wheat | cytosol | 48.44 | 49.28 |
| Os03t0138600-01 | Rice | nucleus, plasma membrane | 49.35 | 49.0 |
| TraesCS4B01G338200.1 | Wheat | mitochondrion | 50.45 | 48.88 |
| TraesCS1D01G147700.1 | Wheat | mitochondrion | 48.74 | 48.84 |
| HORVU1Hr1G039810.1 | Barley | mitochondrion | 48.34 | 48.68 |
| TraesCS4D01G334500.1 | Wheat | mitochondrion | 50.35 | 48.59 |
| Zm00001d032737_P001 | Maize | cytosol | 48.94 | 48.55 |
| TraesCS1A01G150700.1 | Wheat | cytosol | 48.44 | 48.54 |
| EER92892 | Sorghum | mitochondrion | 51.16 | 48.47 |
| HORVU4Hr1G083660.3 | Barley | mitochondrion | 50.15 | 48.35 |
| TraesCS5A01G507900.1 | Wheat | mitochondrion | 49.75 | 47.96 |
| Zm00001d027590_P001 | Maize | mitochondrion | 50.05 | 47.51 |
| Zm00001d010939_P004 | Maize | mitochondrion | 43.5 | 42.69 |
| EES18963 | Sorghum | mitochondrion | 43.5 | 41.26 |
| CDY35337 | Canola | cytosol | 37.97 | 38.39 |
| CDX77008 | Canola | cytosol | 37.87 | 37.94 |
| CDY35919 | Canola | cytosol | 35.75 | 37.29 |
| CDY40469 | Canola | cytosol | 35.55 | 37.12 |
| CDX99020 | Canola | cytosol, peroxisome, plastid | 26.79 | 24.47 |
| CDX69997 | Canola | cytosol, peroxisome, plastid | 26.59 | 24.47 |
| CDY59387 | Canola | cytosol | 12.59 | 20.19 |
| CDX86760 | Canola | cytosol | 22.36 | 19.84 |
Protein Annotations
| EnsemblPlants:CDX79528 | EnsemblPlantsGene:GSBRNA2T00132279001 | InterPro:DUF810 | InterPro:IPR014770 | InterPro:IPR014772 | InterPro:Munc13_1 |
| InterPro:Munc13_dom-2 | ncoils:Coil | PANTHER:PTHR31280 | PANTHER:PTHR31280:SF1 | PFAM:PF05664 | PFscan:PS51258 |
| PFscan:PS51259 | ProteinID:CDX79528 | ProteinID:CDX79528.1 | SEG:seg | UniParc:UPI0004EDE0E7 | MapMan:35.1 |
Description
BnaC03g18640D
Coordinates
chrLK031818:+:529936..534300
Molecular Weight (calculated)
110967.0 Da
IEP (calculated)
7.590
GRAVY (calculated)
-0.301
Length
993 amino acids
Sequence
(BLAST)
(BLAST)
001: MNHHQRRESF SVTISNMGGG STVVCPNTDL LWPFGKLSGL DGNDIRETAY EIFFTACRSS PGFGGKTALT FYSTHNNNDN HGEGGGAATS GGSPGVGATG
101: GAGTTSLSPG SGSGHVSPGA GFLTVQPSRP RRPLTSAEIM RQQMRVTEQS DSRLRKTLLR TLVGQTGRRA ETIILPLELL RHLKTSEFGD SNEYHVWQRR
201: QLKVLEAGLL LHPSIPLDKT NNNAMRLREI VRKSENKTID TSKTSDTMRK LCNVVVSLSW RSTNGNPSDV CHWADGYPLN IHLYVALLQS IFDVRDETLV
301: LDEIDELLEL MKKTWSTLGI TRPVHNLCFT WVLFHQYVVT SQMEPDLLGA SHAMLAEVAN DAKKLDREAL YVKLLTSTLA SMQGWTEKRL LSYHDYFQRG
401: NVGLIENLLP LALSSSRILG DDVTISQGKG DVKLIDYSGD RVDVYIRASI KTAFSKVIEN TKAKIAATEE GEEAAATLLQ LAKETEELAL RERECFSPIL
501: KRWHSVAAGV ASVSLHQCYG SILMQYLAGR SFISRDTVDV LQTAGKLEKV LVQMVAEDTE ECDDGGKGLV REMVPYEVDS IILRLIRQWI EEKLKGVQEC
601: LFRAKETETW NPKSKSEPYA QSAGEMMKLA KDIIDEFFEI PIGITEDLVY DLAEGLEQLF QEYTTFVASC GSRQSYIPTL PPLTRCNRDS RFLKLWKRAT
701: PCTASGKDFS HTAPPSDGHH PRPSTSRGTQ RLYIRLNTLH FLSSHIHSLN KALSLNPTVL PATRKRYRHR NNNTSSYFDF TYAGIESACQ HVSEVAAYRL
801: IFLDSNSVFY ESLYIGDVTN SRIRPALRVT KQNLTLMSAI LADRAQALAM REVMKSSFEA FLMVLLAGGY SRVFYRSDHG LIEEDFENLK RVFCTCGEGL
901: IPEEVVDRDA EIVEGVIQLM SQPTEQLMED FSIVTCETSG MGMVGPGHKL PMPPTTGRWN RSDANTILRV LCHRNDRVAN RFLKKSFQLP KRR
101: GAGTTSLSPG SGSGHVSPGA GFLTVQPSRP RRPLTSAEIM RQQMRVTEQS DSRLRKTLLR TLVGQTGRRA ETIILPLELL RHLKTSEFGD SNEYHVWQRR
201: QLKVLEAGLL LHPSIPLDKT NNNAMRLREI VRKSENKTID TSKTSDTMRK LCNVVVSLSW RSTNGNPSDV CHWADGYPLN IHLYVALLQS IFDVRDETLV
301: LDEIDELLEL MKKTWSTLGI TRPVHNLCFT WVLFHQYVVT SQMEPDLLGA SHAMLAEVAN DAKKLDREAL YVKLLTSTLA SMQGWTEKRL LSYHDYFQRG
401: NVGLIENLLP LALSSSRILG DDVTISQGKG DVKLIDYSGD RVDVYIRASI KTAFSKVIEN TKAKIAATEE GEEAAATLLQ LAKETEELAL RERECFSPIL
501: KRWHSVAAGV ASVSLHQCYG SILMQYLAGR SFISRDTVDV LQTAGKLEKV LVQMVAEDTE ECDDGGKGLV REMVPYEVDS IILRLIRQWI EEKLKGVQEC
601: LFRAKETETW NPKSKSEPYA QSAGEMMKLA KDIIDEFFEI PIGITEDLVY DLAEGLEQLF QEYTTFVASC GSRQSYIPTL PPLTRCNRDS RFLKLWKRAT
701: PCTASGKDFS HTAPPSDGHH PRPSTSRGTQ RLYIRLNTLH FLSSHIHSLN KALSLNPTVL PATRKRYRHR NNNTSSYFDF TYAGIESACQ HVSEVAAYRL
801: IFLDSNSVFY ESLYIGDVTN SRIRPALRVT KQNLTLMSAI LADRAQALAM REVMKSSFEA FLMVLLAGGY SRVFYRSDHG LIEEDFENLK RVFCTCGEGL
901: IPEEVVDRDA EIVEGVIQLM SQPTEQLMED FSIVTCETSG MGMVGPGHKL PMPPTTGRWN RSDANTILRV LCHRNDRVAN RFLKKSFQLP KRR
0001: MTHHHRRESF SVTPSTMGGS VVLCPNTDLL WPFGKLEGLD RDDIRETAYE IFFTACRSSP GFGGRTALTF YSNHNSNDHH GDGGGGIGSG GSTGVGSGFG
0101: SSGRKEVVTT PTSRVKRALG LKMLKRSPSR RMSTIGAAGG AATSLSPGGM NSSAGHISPG AGFLTVQPSR PRRPLTSAEI MRQQMKVTEQ SDSRLRKTLL
0201: RTLVGQTGRR AETIILPLEL LRHLKTSEFG DIHEYQLWQR RQLKVLEAGL LLHPSIPLDK TNNFAMRLRE VVRQSETKPI DTSKTSDTMR TLTNVVVSLS
0301: WRGTNGNPTD VCHWADGYPL NIHLYVALLQ SIFDVRDETL VLDEIDELLE LMKKTWSTLG ITRPIHNLCF TWVLFHQYVV TSQMEPDLLG ASHAMLAEVA
0401: NDAKKLDREA LYVKLLNSTL ASMQGWTEKR LLSYHDYFQR GNVGLIENLL PLALSSSRIL GEDVTISQGK GQEKGDVKLV DHSGDRVDYY IRSSIKNAFS
0501: KVIENTKAKI AATDEGEEAA GTLLQLAKET EELALREREC FSPILKRWHS VAAGVASVSL HQCYGSILMQ YLAGRSFISR DTVEVLQTAG KLEKVLVQMV
0601: AEDSEECEDG GKGLVREMVP YEVDSIILRL LRQWVEEKLK AVQECLFRAK ETETWNPKSK SEPYAQSAGE LMKLAKDTID EFFEIPIGIT EDLVHDIAEG
0701: LEQLFQEYTT FVASCGARQS YIPTLPPLTR CNRDSRFVKL WKRATPCTTS NEDLKYTTSV ISDGHHPRPS TSRGTQRLYI RLNTLHFLSS HIHSLNKTLS
0801: LNPRILPATR KRYRHRNNNS SSYFDFTYAG IESACQHVSE VAAYRLIFLD SNSVLYESLY VGEVANARIR PALRIMKQNL TLMSAILADR AQSLAMREVM
0901: KSSFEAFLMV LLAGGYSRVF YRSDHSIIEE DFENLKRVFC TCGEGLIPEE VVDREAETVE GVIQLMSQPT EQLMEDFSIV TCETSGMGMV GSGQKLPMPP
1001: TTGRWNRSDP NTILRVLCHR NDRVANQFLK KSFQLPKRR
0101: SSGRKEVVTT PTSRVKRALG LKMLKRSPSR RMSTIGAAGG AATSLSPGGM NSSAGHISPG AGFLTVQPSR PRRPLTSAEI MRQQMKVTEQ SDSRLRKTLL
0201: RTLVGQTGRR AETIILPLEL LRHLKTSEFG DIHEYQLWQR RQLKVLEAGL LLHPSIPLDK TNNFAMRLRE VVRQSETKPI DTSKTSDTMR TLTNVVVSLS
0301: WRGTNGNPTD VCHWADGYPL NIHLYVALLQ SIFDVRDETL VLDEIDELLE LMKKTWSTLG ITRPIHNLCF TWVLFHQYVV TSQMEPDLLG ASHAMLAEVA
0401: NDAKKLDREA LYVKLLNSTL ASMQGWTEKR LLSYHDYFQR GNVGLIENLL PLALSSSRIL GEDVTISQGK GQEKGDVKLV DHSGDRVDYY IRSSIKNAFS
0501: KVIENTKAKI AATDEGEEAA GTLLQLAKET EELALREREC FSPILKRWHS VAAGVASVSL HQCYGSILMQ YLAGRSFISR DTVEVLQTAG KLEKVLVQMV
0601: AEDSEECEDG GKGLVREMVP YEVDSIILRL LRQWVEEKLK AVQECLFRAK ETETWNPKSK SEPYAQSAGE LMKLAKDTID EFFEIPIGIT EDLVHDIAEG
0701: LEQLFQEYTT FVASCGARQS YIPTLPPLTR CNRDSRFVKL WKRATPCTTS NEDLKYTTSV ISDGHHPRPS TSRGTQRLYI RLNTLHFLSS HIHSLNKTLS
0801: LNPRILPATR KRYRHRNNNS SSYFDFTYAG IESACQHVSE VAAYRLIFLD SNSVLYESLY VGEVANARIR PALRIMKQNL TLMSAILADR AQSLAMREVM
0901: KSSFEAFLMV LLAGGYSRVF YRSDHSIIEE DFENLKRVFC TCGEGLIPEE VVDREAETVE GVIQLMSQPT EQLMEDFSIV TCETSGMGMV GSGQKLPMPP
1001: TTGRWNRSDP NTILRVLCHR NDRVANQFLK KSFQLPKRR
Arabidopsis Description
Uncharacterized protein At2g33420 [Source:UniProtKB/TrEMBL;Acc:O22792]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.