Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37722 | Canola | mitochondrion | 85.86 | 93.76 |
| CDX84688 | Canola | cytosol | 91.37 | 91.65 |
| CDX79528 | Canola | cytosol | 88.87 | 89.22 |
| AT2G33420.1 | Thale cress | cytosol | 91.67 | 87.97 |
| CDY53192 | Canola | cytosol | 81.24 | 83.42 |
| CDY59176 | Canola | cytosol | 80.84 | 83.01 |
| CDX89822 | Canola | cytosol | 81.54 | 79.32 |
| CDY18234 | Canola | cytosol | 81.54 | 79.32 |
| VIT_05s0049g01560.t01 | Wine grape | nucleus | 67.8 | 66.27 |
| KRG92279 | Soybean | cytosol | 64.29 | 63.34 |
| KRG90363 | Soybean | nucleus | 64.39 | 63.13 |
| KRH33633 | Soybean | nucleus | 63.79 | 62.54 |
| KRH34531 | Soybean | cytosol | 63.19 | 61.89 |
| PGSC0003DMT400044198 | Potato | cytosol | 61.58 | 60.26 |
| Solyc09g090480.2.1 | Tomato | cytosol | 61.28 | 59.96 |
| Solyc03g005630.2.1 | Tomato | cytosol | 60.68 | 59.08 |
| PGSC0003DMT400034999 | Potato | cytosol | 60.78 | 58.95 |
| GSMUA_AchrUn_... | Banana | cytosol | 49.45 | 56.34 |
| GSMUA_Achr1P10950_001 | Banana | cytosol | 52.16 | 55.79 |
| GSMUA_Achr4P29190_001 | Banana | cytosol | 47.54 | 54.48 |
| KRH08629 | Soybean | cytosol | 58.88 | 53.56 |
| KRH70255 | Soybean | plastid | 58.48 | 53.49 |
| GSMUA_Achr1P16870_001 | Banana | cytosol | 48.45 | 53.43 |
| Os10t0471000-01 | Rice | cytosol, mitochondrion | 17.65 | 53.33 |
| GSMUA_Achr1P03530_001 | Banana | cytosol | 46.94 | 52.88 |
| OQU91659 | Sorghum | cytosol | 38.52 | 50.73 |
| TraesCS1B01G168300.2 | Wheat | cytosol | 49.35 | 50.41 |
| HORVU1Hr1G039810.1 | Barley | mitochondrion | 49.55 | 50.1 |
| TraesCS1D01G147700.1 | Wheat | mitochondrion | 49.45 | 49.75 |
| TraesCS4B01G338200.1 | Wheat | mitochondrion | 51.05 | 49.66 |
| Zm00001d032737_P001 | Maize | cytosol | 49.85 | 49.65 |
| EER92892 | Sorghum | mitochondrion | 52.16 | 49.62 |
| TraesCS4D01G334500.1 | Wheat | mitochondrion | 51.15 | 49.56 |
| TraesCS1A01G150700.1 | Wheat | cytosol | 49.05 | 49.34 |
| TraesCS5A01G507900.1 | Wheat | mitochondrion | 50.55 | 48.93 |
| HORVU4Hr1G083660.3 | Barley | mitochondrion | 50.25 | 48.64 |
| Zm00001d027590_P001 | Maize | mitochondrion | 50.65 | 48.28 |
| Os03t0138600-01 | Rice | nucleus, plasma membrane | 48.34 | 48.2 |
| Zm00001d010939_P004 | Maize | mitochondrion | 44.03 | 43.38 |
| EES18963 | Sorghum | mitochondrion | 44.33 | 42.22 |
| CDY35919 | Canola | cytosol | 36.81 | 38.55 |
| CDY40469 | Canola | cytosol | 36.71 | 38.49 |
| CDY35337 | Canola | cytosol | 37.71 | 38.29 |
| CDX77008 | Canola | cytosol | 37.91 | 38.14 |
| CDX69997 | Canola | cytosol, peroxisome, plastid | 26.48 | 24.47 |
| CDX99020 | Canola | cytosol, peroxisome, plastid | 26.48 | 24.29 |
| CDX86760 | Canola | cytosol | 22.47 | 20.02 |
| CDY59387 | Canola | cytosol | 12.14 | 19.55 |
Protein Annotations
| EnsemblPlants:CDY23738 | EnsemblPlantsGene:GSBRNA2T00024068001 | InterPro:DUF810 | InterPro:IPR014770 | InterPro:IPR014772 | InterPro:Munc13_1 |
| InterPro:Munc13_dom-2 | PANTHER:PTHR31280 | PANTHER:PTHR31280:SF1 | PFAM:PF05664 | PFscan:PS51258 | PFscan:PS51259 |
| ProteinID:CDY23738 | ProteinID:CDY23738.1 | SEG:seg | UniParc:UPI0004EDFE65 | UniProt:A0A078GGI6 | MapMan:35.1 |
Description
BnaC04g43840DBnaC04g43840D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GGI6]
Coordinates
chrLK032148:-:135324..139545
Molecular Weight (calculated)
112296.0 Da
IEP (calculated)
7.838
GRAVY (calculated)
-0.288
Length
997 amino acids
Sequence
(BLAST)
(BLAST)
001: MNHHHRRESF SVTISNMGGG STVLCPNTDL LWPFGKLNGL EPDDIRETAY EIFFTACRSS PGFGGRTALT FYSTHNNNDN HGEAGGGGGG GSNGGGSGSG
101: FGFSGRKEVV TTPTSRVKRA LGLKMLKRSP SRRIRPLTSA EIMRQQMRVT EQSDSRLRKT LLRTLVGQTG RRAETIILPL ELLRHLKTSE FGDGPEYQLW
201: QRRQLKVLEA GLLLHPSIPL DKTNNYAMRL REIVRQSENK PIDTSKTSDT MRTLCNVIVS LAWRSTNGNP SDVCHWADGF PLSIHLYVAL LQSIFDVRDE
301: TLVLDEIDEM LELMKKTWST LGITRPVHNL CFTWVLFHQY VVTSQMEPDL LGASHAMLAE VANDAKKLDR EALYVKLLTS VLASMQGWTE KRLLSYHDYF
401: QRGNVGLIEN LLPLALSSSK ILGEDVTISQ GKGDVKLIDY SGDRVDYYIR ASIKTAFSKV IENTKAKILA TEEGEEAAAT LLHLAKETEE LALRERECFS
501: PILKRWHSVA AGVASVSLHQ CYGSILMQYL AGRFFISRDT VEVLQTAGKL EKVLVQMVAE DSEEFDDGGK GLVQEMVPYE VDSIILRLLR QWIEENLKRV
601: QECLFRAKET ETWNPKSKSE PYAQSAGELM KLAKEIIDEF FEIPIGITED LVHDLVEGLE QLFQEYTTFV ASCGSRQSYI PTLPPLTRCN RDSGFLKLWK
701: RATPCTAVRE DFSHVAPALS DGHHARPSTS RGTQRLYIRL NTLHFLSSHI HSLNKTLSLN PRVLPATRKR YRHRNNNSSS YFDFTYAGIE SACQHVSEVA
801: AYRLIFLDSN SVLYESLYVG EVANTRIRPA LRIMKQNLTL MSAILADRAQ ALAMREVMKS SFEAFLMVLL AGGFSRVFYR SDHSLIEEDF ESLKRVFCTC
901: GEGLIPEDIV DRDAETVEGV IQLMSQPTEQ LMEDFSIVTC ETSGMGMVGS KQKLPMPPTT GRWNRSDPNT ILRVLCHRND RVANQFLKKS FQLPKRR
101: FGFSGRKEVV TTPTSRVKRA LGLKMLKRSP SRRIRPLTSA EIMRQQMRVT EQSDSRLRKT LLRTLVGQTG RRAETIILPL ELLRHLKTSE FGDGPEYQLW
201: QRRQLKVLEA GLLLHPSIPL DKTNNYAMRL REIVRQSENK PIDTSKTSDT MRTLCNVIVS LAWRSTNGNP SDVCHWADGF PLSIHLYVAL LQSIFDVRDE
301: TLVLDEIDEM LELMKKTWST LGITRPVHNL CFTWVLFHQY VVTSQMEPDL LGASHAMLAE VANDAKKLDR EALYVKLLTS VLASMQGWTE KRLLSYHDYF
401: QRGNVGLIEN LLPLALSSSK ILGEDVTISQ GKGDVKLIDY SGDRVDYYIR ASIKTAFSKV IENTKAKILA TEEGEEAAAT LLHLAKETEE LALRERECFS
501: PILKRWHSVA AGVASVSLHQ CYGSILMQYL AGRFFISRDT VEVLQTAGKL EKVLVQMVAE DSEEFDDGGK GLVQEMVPYE VDSIILRLLR QWIEENLKRV
601: QECLFRAKET ETWNPKSKSE PYAQSAGELM KLAKEIIDEF FEIPIGITED LVHDLVEGLE QLFQEYTTFV ASCGSRQSYI PTLPPLTRCN RDSGFLKLWK
701: RATPCTAVRE DFSHVAPALS DGHHARPSTS RGTQRLYIRL NTLHFLSSHI HSLNKTLSLN PRVLPATRKR YRHRNNNSSS YFDFTYAGIE SACQHVSEVA
801: AYRLIFLDSN SVLYESLYVG EVANTRIRPA LRIMKQNLTL MSAILADRAQ ALAMREVMKS SFEAFLMVLL AGGFSRVFYR SDHSLIEEDF ESLKRVFCTC
901: GEGLIPEDIV DRDAETVEGV IQLMSQPTEQ LMEDFSIVTC ETSGMGMVGS KQKLPMPPTT GRWNRSDPNT ILRVLCHRND RVANQFLKKS FQLPKRR
0001: MTHHHRRESF SVTPSTMGGS VVLCPNTDLL WPFGKLEGLD RDDIRETAYE IFFTACRSSP GFGGRTALTF YSNHNSNDHH GDGGGGIGSG GSTGVGSGFG
0101: SSGRKEVVTT PTSRVKRALG LKMLKRSPSR RMSTIGAAGG AATSLSPGGM NSSAGHISPG AGFLTVQPSR PRRPLTSAEI MRQQMKVTEQ SDSRLRKTLL
0201: RTLVGQTGRR AETIILPLEL LRHLKTSEFG DIHEYQLWQR RQLKVLEAGL LLHPSIPLDK TNNFAMRLRE VVRQSETKPI DTSKTSDTMR TLTNVVVSLS
0301: WRGTNGNPTD VCHWADGYPL NIHLYVALLQ SIFDVRDETL VLDEIDELLE LMKKTWSTLG ITRPIHNLCF TWVLFHQYVV TSQMEPDLLG ASHAMLAEVA
0401: NDAKKLDREA LYVKLLNSTL ASMQGWTEKR LLSYHDYFQR GNVGLIENLL PLALSSSRIL GEDVTISQGK GQEKGDVKLV DHSGDRVDYY IRSSIKNAFS
0501: KVIENTKAKI AATDEGEEAA GTLLQLAKET EELALREREC FSPILKRWHS VAAGVASVSL HQCYGSILMQ YLAGRSFISR DTVEVLQTAG KLEKVLVQMV
0601: AEDSEECEDG GKGLVREMVP YEVDSIILRL LRQWVEEKLK AVQECLFRAK ETETWNPKSK SEPYAQSAGE LMKLAKDTID EFFEIPIGIT EDLVHDIAEG
0701: LEQLFQEYTT FVASCGARQS YIPTLPPLTR CNRDSRFVKL WKRATPCTTS NEDLKYTTSV ISDGHHPRPS TSRGTQRLYI RLNTLHFLSS HIHSLNKTLS
0801: LNPRILPATR KRYRHRNNNS SSYFDFTYAG IESACQHVSE VAAYRLIFLD SNSVLYESLY VGEVANARIR PALRIMKQNL TLMSAILADR AQSLAMREVM
0901: KSSFEAFLMV LLAGGYSRVF YRSDHSIIEE DFENLKRVFC TCGEGLIPEE VVDREAETVE GVIQLMSQPT EQLMEDFSIV TCETSGMGMV GSGQKLPMPP
1001: TTGRWNRSDP NTILRVLCHR NDRVANQFLK KSFQLPKRR
0101: SSGRKEVVTT PTSRVKRALG LKMLKRSPSR RMSTIGAAGG AATSLSPGGM NSSAGHISPG AGFLTVQPSR PRRPLTSAEI MRQQMKVTEQ SDSRLRKTLL
0201: RTLVGQTGRR AETIILPLEL LRHLKTSEFG DIHEYQLWQR RQLKVLEAGL LLHPSIPLDK TNNFAMRLRE VVRQSETKPI DTSKTSDTMR TLTNVVVSLS
0301: WRGTNGNPTD VCHWADGYPL NIHLYVALLQ SIFDVRDETL VLDEIDELLE LMKKTWSTLG ITRPIHNLCF TWVLFHQYVV TSQMEPDLLG ASHAMLAEVA
0401: NDAKKLDREA LYVKLLNSTL ASMQGWTEKR LLSYHDYFQR GNVGLIENLL PLALSSSRIL GEDVTISQGK GQEKGDVKLV DHSGDRVDYY IRSSIKNAFS
0501: KVIENTKAKI AATDEGEEAA GTLLQLAKET EELALREREC FSPILKRWHS VAAGVASVSL HQCYGSILMQ YLAGRSFISR DTVEVLQTAG KLEKVLVQMV
0601: AEDSEECEDG GKGLVREMVP YEVDSIILRL LRQWVEEKLK AVQECLFRAK ETETWNPKSK SEPYAQSAGE LMKLAKDTID EFFEIPIGIT EDLVHDIAEG
0701: LEQLFQEYTT FVASCGARQS YIPTLPPLTR CNRDSRFVKL WKRATPCTTS NEDLKYTTSV ISDGHHPRPS TSRGTQRLYI RLNTLHFLSS HIHSLNKTLS
0801: LNPRILPATR KRYRHRNNNS SSYFDFTYAG IESACQHVSE VAAYRLIFLD SNSVLYESLY VGEVANARIR PALRIMKQNL TLMSAILADR AQSLAMREVM
0901: KSSFEAFLMV LLAGGYSRVF YRSDHSIIEE DFENLKRVFC TCGEGLIPEE VVDREAETVE GVIQLMSQPT EQLMEDFSIV TCETSGMGMV GSGQKLPMPP
1001: TTGRWNRSDP NTILRVLCHR NDRVANQFLK KSFQLPKRR
Arabidopsis Description
Uncharacterized protein At2g33420 [Source:UniProtKB/TrEMBL;Acc:O22792]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.