CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra021851.1-P	Field mustard	cytosol	99.23	87.45
CDY23738	Canola	cytosol	93.76	85.86
CDX79528	Canola	cytosol	90.69	83.38
CDX84688	Canola	cytosol	89.16	81.89
AT2G33420.1	Thale cress	cytosol	91.89	80.75
CDY53192	Canola	cytosol	80.18	75.39
CDY59176	Canola	cytosol	79.63	74.87
CDX89822	Canola	cytosol	82.8	73.76
CDY18234	Canola	cytosol	82.69	73.66
VIT_05s0049g01560.t01	Wine grape	nucleus	67.25	60.2
KRG90363	Soybean	nucleus	64.95	58.31
KRG92279	Soybean	cytosol	64.4	58.1
KRH33633	Soybean	nucleus	64.62	58.01
KRH34531	Soybean	cytosol	63.31	56.78
PGSC0003DMT400044198	Potato	cytosol	62.76	56.23
Solyc09g090480.2.1	Tomato	cytosol	62.54	56.04
Solyc03g005630.2.1	Tomato	cytosol	61.12	54.49
GSMUA_Achr4P29190_001	Banana	cytosol	51.92	54.48
PGSC0003DMT400034999	Potato	cytosol	61.34	54.47
GSMUA_AchrUn_...	Banana	cytosol	51.92	54.17
Os10t0471000-01	Rice	cytosol, mitochondrion	19.06	52.73
GSMUA_Achr1P10950_001	Banana	cytosol	53.12	52.04
OQU91659	Sorghum	cytosol	41.95	50.59
GSMUA_Achr1P03530_001	Banana	cytosol	48.41	49.94
GSMUA_Achr1P16870_001	Banana	cytosol	49.18	49.67
KRH70255	Soybean	plastid	58.16	48.72
KRH08629	Soybean	cytosol	58.27	48.54
Os03t0138600-01	Rice	nucleus, plasma membrane	52.57	48.0
TraesCS1B01G168300.2	Wheat	cytosol	50.05	46.82
HORVU1Hr1G039810.1	Barley	mitochondrion	50.05	46.35
TraesCS4B01G338200.1	Wheat	mitochondrion	52.03	46.34
TraesCS4D01G334500.1	Wheat	mitochondrion	52.14	46.26
EER92892	Sorghum	mitochondrion	53.01	46.18
TraesCS1D01G147700.1	Wheat	mitochondrion	50.05	46.12
Zm00001d032737_P001	Maize	cytosol	50.27	45.85
TraesCS5A01G507900.1	Wheat	mitochondrion	51.59	45.73
TraesCS1A01G150700.1	Wheat	cytosol	49.62	45.71
HORVU4Hr1G083660.3	Barley	mitochondrion	51.37	45.53
Zm00001d027590_P001	Maize	mitochondrion	51.81	45.22
Zm00001d010939_P004	Maize	mitochondrion	44.03	39.72
EES18963	Sorghum	mitochondrion	44.58	38.87
CDY35337	Canola	cytosol	38.99	36.25
CDY35919	Canola	cytosol	37.57	36.03
CDY40469	Canola	cytosol	37.35	35.86
CDX77008	Canola	cytosol	38.88	35.82
CDX69997	Canola	cytosol, peroxisome, plastid	27.27	23.08
CDX99020	Canola	cytosol, peroxisome, plastid	27.38	23.0
CDY59387	Canola	cytosol	13.36	19.71
CDX86760	Canola	cytosol	21.8	17.78

Protein Annotations

EnsemblPlants:CDY37722	EnsemblPlantsGene:GSBRNA2T00064623001	InterPro:DUF810	InterPro:IPR014770	InterPro:IPR014772	InterPro:Munc13_1
InterPro:Munc13_dom-2	PANTHER:PTHR31280	PANTHER:PTHR31280:SF1	PFAM:PF05664	PFscan:PS51258	PFscan:PS51259
ProteinID:CDY37722	ProteinID:CDY37722.1	SEG:seg	UniParc:UPI0004EED728	UniProt:A0A078HIP0	MapMan:35.1

Description

BnaA04g19460DBnaA04g19460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HIP0]

Coordinates

chrLK032406:-:214102..217665

Molecular Weight (calculated)

103087.0 Da

IEP (calculated)

7.987

GRAVY (calculated)

-0.241

Length

913 amino acids

Sequence
(BLAST)

001: MLKRSPSRRM STIGVAGGAG VNSLSPGGGS GSGHISPGAG FLTVQPTRPR RPLTSAEIMR QQMRVTEQSD SRLRKTLLRT LVGQTGRRAE TIILPLELLR
101: HLKTSEFGDG PEYQLWQRRQ LKVLEAGLLL HPSIPLDKTN NYAMRLREFV RQSENKPIDT SKTSDTMRTL CNVVVSLAWR STNGNPSDVC HWADGFPLNV
201: HLYVALLQSI FDVRDETLVL DEIDEMLELM KKTWLTLGIT RPVHNLCFTW VLFHQYVVTS QMEPDLLGAS HAMLAEVAND AKKLDREALY VKLLTSVLAS
301: MQGWTEKRLL SYHDYFQRGN VGLIENLLPL ALSSSRILGE DVTISQGKGD VKLIDYSGDR VDYYIRASIK TAFSKVIENT KAKILATDEG EEAAATLLHL
401: AKETEELALR ERECFSPILK RWHSVAAGVA SVSLHQCYGS ILMQYLAGRS FISRDTVEVL QTAGKLEKVL VQMVAEDSEE FDDGGKGLVQ EMVPYEVDSI
501: ILRLLRQWIE ENLKRVQECL FRAKETETWN PKSKSEPYAQ SAGELMKLAK EIIDEFFEIP IGITEDLVHD LVEGLEQLFQ EYTTFVASCG SRQSYIPTLP
601: PLTRCNRDSG FLKLWKRATL CTAVREDFSH VAPALSDSHH ARPSTSRGTQ RLYIRLNTLH FLSSHIHSLN KTLSLNPRVL PATRKRYRHR SNNSSSYFDF
701: TYAGIESACQ HVSEVAAYRL IFLDSNSVLY ESLYVGEVMN TRIRPALRVM KQNLTLMSAI LADRAQALAM REVMKSSFEA FLMVLLAGGF SRVFYRSDHS
801: LIEEDFESLK RVFCTCGEGL IPEDIVDRDA ESVEGVIQLM SQPTEQLMED FSIVTCETSG MGMVGSRQKL PMPPTTGRWN RSDPKTILRV LCHRNDRVAN
901: QFLKKSFQLP KRR

Best Arabidopsis Sequence Match ( AT1G04470.1 )
(BLAST)

0001: MVRHSRRESF FDMVGFEVCP DTDLLWPFGK LDGLDRDEIR ETAYEIFFAA CRSSPGFGGR NALTFYSKHN AGDHQGDGIG GGGGSGSSNG SGFGSLGRKE
0101: VLTTPTSRVK RALGLKMLKR SPSRRMSTVG TVVGAVSAPS SPGNNGSIGS GSGHFSPGAG FFTVPPARPR RPLTSAEIMR QQMKVTEQSD TRLRKTLMRT
0201: LVGQTGRRAE TIILPLELLR HVKPSEFGDV HEYQIWQRRQ LKVLEAGLLI HPSIPLEKTN NFAMRLREII RQSETKAIDT SKNSDIMPTL CNLVASLSWR
0301: NATPTTDICH WADGYPLNIH LYVALLQSIF DIRDETLVLD EIDELLELMK KTWIMLGITR AIHNLCFTWV LFHQYIVTSQ MEPDLLGASH AMLAEVANDA
0401: KKSDREALYV KLLTSTLASM QGWTEKRLLS YHDYFQRGNV GLIENLLPLA LSSSKILGED VTISQMNGLE KGDVKLVDSS GDRVDYYIRA SIKNAFSKVI
0501: ENMKAEIEET EEGEEEAATM LLRLAKETED LALRESECFS PILKRWHLVA AGVASVSLHQ CYGSILMQYL AGRSTITKET VEVLQTAGKL EKVLVQMVAE
0601: NSDECEDGGK GLVREMVPYE VDSIILRLLR QWIEEKLQTV QECLSRAKEA ETWNPKSKSE PYAQSAGELM KLANDAIEEF FEIPIGITED LVHDLAEGLE
0701: KLFQEYTTFV ASCGSKQSYI PTLPPLTRCN RDSKFVKLWK KATPCAASGE ELNQMGEAPG GNHPRPSTSR GTQRLYIRLN TLHFLSSQLH SLNKSLSLNP
0801: RVLPATRKRC RERTKSSSYF EFTQAGIESA CQHVSEVAAY RLIFLDSYSV FYESLYPGDV ANGRIKPALR ILKQNLTLMT AILADKAQAL AMKEVMKASF
0901: EVVLTVLLAG GHSRVFCRTD HDLIEEDFES LKKVYCTCGE GLIPEEVVDR EAETVEGVIQ LMGQPTEQLM EDFSIVTCES SGMGLVGTGQ KLPMPPTTGR
1001: WNRSDPNTIL RVLCYRDDRV ANQFLKKSFQ LGKRR

Arabidopsis Description

F19P19.6 protein [Source:UniProtKB/TrEMBL;Acc:P93812]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.