Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU2Hr1G111640.2 | plasma membrane |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G06970.1 | HORVU2Hr1G111640.2 | AT2G18960.1 | 24163289 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0683700-02 | Rice | plasma membrane | 49.42 | 82.31 |
| KRH13324 | Soybean | cytosol | 18.48 | 61.07 |
| TraesCS1A01G052200.3 | Wheat | cytosol, mitochondrion, nucleus | 98.61 | 38.61 |
| TraesCS2D01G215400.1 | Wheat | nucleus | 98.61 | 38.57 |
| TraesCS1B01G069300.2 | Wheat | nucleus | 98.15 | 37.78 |
| KXG21868 | Sorghum | cytosol | 86.14 | 33.73 |
| HORVU2Hr1G095440.1 | Barley | cytosol, extracellular | 11.09 | 33.1 |
| Zm00001d037867_P001 | Maize | cytosol | 85.91 | 31.82 |
| VIT_13s0084g00630.t01 | Wine grape | cytosol | 66.51 | 25.58 |
| Bra009303.1-P | Field mustard | cytosol, peroxisome, plastid | 62.59 | 25.16 |
| CDX69997 | Canola | cytosol, peroxisome, plastid | 62.59 | 25.12 |
| CDX99020 | Canola | cytosol, peroxisome, plastid | 62.82 | 25.02 |
| AT5G06970.1 | Thale cress | cytosol | 63.28 | 24.89 |
| KRH13315 | Soybean | cytosol, endoplasmic reticulum, nucleus | 63.05 | 24.73 |
| KRH20669 | Soybean | endoplasmic reticulum | 62.82 | 24.68 |
| Solyc01g096540.2.1 | Tomato | cytosol, plastid | 63.05 | 24.59 |
| HORVU2Hr1G127720.4 | Barley | cytosol | 7.85 | 20.99 |
| HORVU2Hr1G041780.2 | Barley | cytosol | 22.17 | 17.84 |
| GSMUA_Achr2P01140_001 | Banana | cytosol | 26.1 | 13.88 |
| HORVU5Hr1G041860.5 | Barley | plastid | 30.02 | 13.22 |
| HORVU4Hr1G083660.3 | Barley | mitochondrion | 28.87 | 12.14 |
| HORVU4Hr1G057790.4 | Barley | plastid | 27.25 | 11.98 |
| HORVU1Hr1G039810.1 | Barley | mitochondrion | 25.17 | 11.05 |
| PGSC0003DMT400004282 | Potato | extracellular | 3.7 | 6.15 |
| Solyc02g071830.1.1 | Tomato | endoplasmic reticulum, extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G041800.16 | EnsemblPlantsGene:HORVU2Hr1G041800 | InterPro:DUF810 | InterPro:IPR014770 | InterPro:IPR014772 | InterPro:Munc13_1 |
| InterPro:Munc13_dom-2 | ncoils:Coil | PANTHER:PTHR31280 | PANTHER:PTHR31280:SF2 | PFAM:PF05664 | PFscan:PS51258 |
| PFscan:PS51259 | UniParc:UPI000B47B154 | UniProt:A0A287HTD1 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchr2H:+:208599513..208614972
Molecular Weight (calculated)
49199.3 Da
IEP (calculated)
5.442
GRAVY (calculated)
-0.216
Length
433 amino acids
Sequence
(BLAST)
(BLAST)
001: FLEHAEHLTE DVVSVFPAAD SLEQYIMSVM ASVVGDDGLD SLCRQKLVPY EIESKSGTVV LRWVNGQLER VETWVKRAAE QETWDPISPQ QRHGGSIVEV
101: YRIIEETADQ FFAFKVPMRI GELNSFCRGI DKAFQIYTQL VTQPIVDKED LVPPVPVLTR YKKELRIKAF VKKEIQEVRP VDERKSSEIV QLTMSKLCVR
201: FNSLYYAISQ LGKLEDSISE RWAKRQSDKI NIRRSMNGKS KSVVSNLKNQ FDGSRKEINA AIDRVCEFTG LKVIFWDLQQ PFIDNMYKNN VLQARLDTIV
301: EVLDLVLAQL CDVIVEQLRD RVVTGLLQAS LDGLVRVILD GGPTRIFSPN DAPLLEEDLE ILKEFFISGG DGLPRGTVEN LVSRVRPVIN LIKQETRVLI
401: DDLREVTQGG KSKFGSDSKT LLRVLCHRND SEA
101: YRIIEETADQ FFAFKVPMRI GELNSFCRGI DKAFQIYTQL VTQPIVDKED LVPPVPVLTR YKKELRIKAF VKKEIQEVRP VDERKSSEIV QLTMSKLCVR
201: FNSLYYAISQ LGKLEDSISE RWAKRQSDKI NIRRSMNGKS KSVVSNLKNQ FDGSRKEINA AIDRVCEFTG LKVIFWDLQQ PFIDNMYKNN VLQARLDTIV
301: EVLDLVLAQL CDVIVEQLRD RVVTGLLQAS LDGLVRVILD GGPTRIFSPN DAPLLEEDLE ILKEFFISGG DGLPRGTVEN LVSRVRPVIN LIKQETRVLI
401: DDLREVTQGG KSKFGSDSKT LLRVLCHRND SEA
0001: MDSLLQRYRN DRRKLMEFLM SSGLVKELRS PSGSPTSLSP ADLDALSADY VLDCVKSGGV VDVSKGREKY NFDSSYPVTI HSESGDSYFL VSSPDLAGSP
0101: PHRMPPPPVN IEKSSNNGAD MSRHMDSSNT PSARDNYVFK EETPDIKPVK PIKIIPLGLP PLRTGLSDDD LREAAYELMI ASMLLSSFLT NSVEAYPTHR
0201: RKIEKSSRLM LSLKRKDKPH LQPQISNTHS EISSKMDTCI RRNLVQLATL RTGEQIDLPQ LALGLLVGIF KSDFPNEKLY MKWKTRQANL LEEVLCFSPS
0301: LEKNERATMR KCLATIRDSK EWDVVVSASL RIEVLSSIRQ VASKLSSLPG RCGIEEETYY WTAIYHLNIR LYEKLLFGVF DTLDEGQVIE DASSMLFHMK
0401: SIWSTLGITE NLHSAIYGWV LFQQFVCTGE PSLLGSTIQE LQKVTSAESG NPKEDLYLSH LVCSRQTIGT DIHLGLVKAI LTSVSAWCDD KLQDYHLHFG
0501: KKPRDFGMLV RLASTVGLPP ADCTRTELIK LDTLSDDVSD KIQSYVQNSI KGACARAAHF AYVKSHGERT HALALLANEL TVIAKVEINE FVPVFSKWLP
0601: ECMMISAMLL HRFYGERLTP FLEGVSSLSG DVRKVVPAAY MLQEELTQLY NCHSKSKLRK PYFHKLKNYE IEKAVKPVML DWLISQHDHI LQWTRRAFEI
0701: EEWEPLSVQQ RHAASIVEIF RIIEETVSQL FGLHLPVDIT HLQALLSLIY HSLDTYLQRV FDQLVDKKFL YPSAPPLTRF TENVMPVMKR KSLEFSEPDN
0801: KIVKKLDELT IPKLCIILNT LCYIQKQISA TEVGIRKSLT LVEASLNKRS EIETDEAEVE NSLTHSEAVD ELFATTYDSL RDTNANCITK TRDLIGARAI
0901: FWDLRDMFLI QLYNGTVEGA RLERILPHID SVLDTVCSLS YEDSRDMVVL SICRSALEAY VRVLLDGGPT RAFSDSDITL MEEDLSILKE FFIADGEGLP
1001: RSLVEQEAKQ AKEILDLYSL ESDMLIQMLM TASELINMGV SSEQRRLEDA QTLVRVLCHK KDRNASKFLK RQYELPMSTE YEDVTLNLPA LSEIVRSTST
1101: HWSTASQNSF SSIKKKIQEA TSEIRNNSGW
0101: PHRMPPPPVN IEKSSNNGAD MSRHMDSSNT PSARDNYVFK EETPDIKPVK PIKIIPLGLP PLRTGLSDDD LREAAYELMI ASMLLSSFLT NSVEAYPTHR
0201: RKIEKSSRLM LSLKRKDKPH LQPQISNTHS EISSKMDTCI RRNLVQLATL RTGEQIDLPQ LALGLLVGIF KSDFPNEKLY MKWKTRQANL LEEVLCFSPS
0301: LEKNERATMR KCLATIRDSK EWDVVVSASL RIEVLSSIRQ VASKLSSLPG RCGIEEETYY WTAIYHLNIR LYEKLLFGVF DTLDEGQVIE DASSMLFHMK
0401: SIWSTLGITE NLHSAIYGWV LFQQFVCTGE PSLLGSTIQE LQKVTSAESG NPKEDLYLSH LVCSRQTIGT DIHLGLVKAI LTSVSAWCDD KLQDYHLHFG
0501: KKPRDFGMLV RLASTVGLPP ADCTRTELIK LDTLSDDVSD KIQSYVQNSI KGACARAAHF AYVKSHGERT HALALLANEL TVIAKVEINE FVPVFSKWLP
0601: ECMMISAMLL HRFYGERLTP FLEGVSSLSG DVRKVVPAAY MLQEELTQLY NCHSKSKLRK PYFHKLKNYE IEKAVKPVML DWLISQHDHI LQWTRRAFEI
0701: EEWEPLSVQQ RHAASIVEIF RIIEETVSQL FGLHLPVDIT HLQALLSLIY HSLDTYLQRV FDQLVDKKFL YPSAPPLTRF TENVMPVMKR KSLEFSEPDN
0801: KIVKKLDELT IPKLCIILNT LCYIQKQISA TEVGIRKSLT LVEASLNKRS EIETDEAEVE NSLTHSEAVD ELFATTYDSL RDTNANCITK TRDLIGARAI
0901: FWDLRDMFLI QLYNGTVEGA RLERILPHID SVLDTVCSLS YEDSRDMVVL SICRSALEAY VRVLLDGGPT RAFSDSDITL MEEDLSILKE FFIADGEGLP
1001: RSLVEQEAKQ AKEILDLYSL ESDMLIQMLM TASELINMGV SSEQRRLEDA QTLVRVLCHK KDRNASKFLK RQYELPMSTE YEDVTLNLPA LSEIVRSTST
1101: HWSTASQNSF SSIKKKIQEA TSEIRNNSGW
Arabidopsis Description
Protein of unknown function (DUF810) [Source:TAIR;Acc:AT4G11670]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.