Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- plastid 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g014680.2.1 | Tomato | plastid | 76.31 | 90.55 |
| KRH11512 | Soybean | plastid | 58.25 | 71.94 |
| KRH36527 | Soybean | plastid | 57.48 | 70.48 |
| PGSC0003DMT400034711 | Potato | mitochondrion, plastid | 55.73 | 66.28 |
| AT4G22290.1 | Thale cress | cytosol, plasma membrane, plastid | 53.79 | 62.25 |
| Bra019387.1-P | Field mustard | cytosol, plasma membrane, plastid | 53.01 | 61.76 |
| CDX94089 | Canola | cytosol, plasma membrane, plastid | 53.01 | 61.76 |
| CDX82929 | Canola | cytosol, plasma membrane, plastid | 52.82 | 61.68 |
| Bra013607.1-P | Field mustard | cytosol, plasma membrane, plastid | 53.01 | 61.63 |
| CDX79143 | Canola | cytosol, plasma membrane, plastid | 52.82 | 61.4 |
| CDX98741 | Canola | cytosol, plasma membrane, plastid | 52.23 | 61.0 |
| CDY16692 | Canola | cytosol, plasma membrane, plastid | 47.77 | 57.48 |
| Bra029474.1-P | Field mustard | cytosol, plasma membrane, plastid | 44.08 | 57.04 |
| CDX94532 | Canola | cytosol, plasma membrane, plastid | 47.18 | 56.91 |
| PGSC0003DMT400025018 | Potato | cytosol, mitochondrion, plasma membrane, plastid | 45.24 | 49.36 |
| PGSC0003DMT400025021 | Potato | cytosol, plasma membrane, plastid | 45.24 | 49.36 |
| PGSC0003DMT400023759 | Potato | cytosol, mitochondrion, plasma membrane, plastid | 43.88 | 47.28 |
| PGSC0003DMT400000687 | Potato | endoplasmic reticulum, plasma membrane, plastid | 20.19 | 37.14 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400060565 | EnsemblPlantsGene:PGSC0003DMG401023562 | EntrezGene:102598481 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR33709 | PANTHER:PTHR33709:SF2 | PGSC:PGSC0003DMG401023562 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0002956FF0 |
| UniProt:M1C639 | MapMan:35.1 | : | : | : | : |
Description
Ubiquitin thiolesterase [Source:PGSC_GENE;Acc:PGSC0003DMG401023562]
Coordinates
chr4:-:8683275..8688315
Molecular Weight (calculated)
56242.4 Da
IEP (calculated)
9.923
GRAVY (calculated)
-0.075
Length
515 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSRTGSHQL SNGLIVSGRP EQLKERQPTM GSRAVPYTGG DIKKSGELGK MYGVGDYPGP PPILKPSSRG SSASQHNSGS VRSGPNSGPV GHKLTNSGSM
101: PKKSSGSFSG QLMTPIQPTG LITSGPLSSN TGRRSGQLEP AASFKKVVYG SSVTSLNDEI KLGFKVSKVA MWVFLVVVLM GLVVGAFLMV AVKKAVILVA
201: VAGVLAPLVV ILLWNFAYKE RGLLGYLKRY PDAELRGAID GQFVKVTGIC CRNVRGDSVM TQTYGIRDRH LVTTLAKPTW LIDIPRLQEY LEYGGYWLTC
301: AIECLLLSPK MNFIFLLKNY SQVQKLAYEV VTCGSIPLET SFQRTARCVY ASTELDEYKG WGGKSANPSH RCFSWGRRHS EKHVADFYIS DFQSGLRAIV
401: KAGYGAKVVP FVKPTTVIDV TKNNKELSPN FLRWLADRSL SSDDRIMRLK EGYIKEGSTV SVMGLVRRHE NVLMIVPPVD PVSTGCQWTR CLLPTYIEGL
501: ILTCDDSQNA DVIPV
101: PKKSSGSFSG QLMTPIQPTG LITSGPLSSN TGRRSGQLEP AASFKKVVYG SSVTSLNDEI KLGFKVSKVA MWVFLVVVLM GLVVGAFLMV AVKKAVILVA
201: VAGVLAPLVV ILLWNFAYKE RGLLGYLKRY PDAELRGAID GQFVKVTGIC CRNVRGDSVM TQTYGIRDRH LVTTLAKPTW LIDIPRLQEY LEYGGYWLTC
301: AIECLLLSPK MNFIFLLKNY SQVQKLAYEV VTCGSIPLET SFQRTARCVY ASTELDEYKG WGGKSANPSH RCFSWGRRHS EKHVADFYIS DFQSGLRAIV
401: KAGYGAKVVP FVKPTTVIDV TKNNKELSPN FLRWLADRSL SSDDRIMRLK EGYIKEGSTV SVMGLVRRHE NVLMIVPPVD PVSTGCQWTR CLLPTYIEGL
501: ILTCDDSQNA DVIPV
001: MGSRYPSHQL SNGLFVSGRP EQPKERAPTM SAVAMPYTGG DIKRSGELGK MFDIPADGTK SRKSGPIPGA PSRSGSFAGT AQSGPGAPMA TGRMSGSLAS
101: AGSVSMKKTN SGPLSKHGEP LKKSSGPQSG GVTRQNSGSI PILPATGLIT SGPITSGPLN SSGAPRKVSG PLDSSGLMKS HMPTVVHNQA VTTLGPEDDF
201: SCLKSFPKPV LWLVVLIFIM GFLAGGFILG AVHNPILLVV VAILFTVVAA LFIWNICWGR RGITDFIARY PDADLRTAKN GQHVKVTGVV TCGNVPLESS
301: FHRVPRCVYT STCLYEYRGW GSKPANSSHR HFTWGLRSSE RHVVDFYISD FQSGLRALVK TGSGAKVTPL VDDSVVIDFK QGSEQVSPDF VRWLGKKNLT
401: SDDRIMRLKE GYIKEGSTVS VIGVVQRNDN VLMIVPSSEP LAAGWQWRRC TFPTSLEGIV LRCEDSSNVD AIPV
101: AGSVSMKKTN SGPLSKHGEP LKKSSGPQSG GVTRQNSGSI PILPATGLIT SGPITSGPLN SSGAPRKVSG PLDSSGLMKS HMPTVVHNQA VTTLGPEDDF
201: SCLKSFPKPV LWLVVLIFIM GFLAGGFILG AVHNPILLVV VAILFTVVAA LFIWNICWGR RGITDFIARY PDADLRTAKN GQHVKVTGVV TCGNVPLESS
301: FHRVPRCVYT STCLYEYRGW GSKPANSSHR HFTWGLRSSE RHVVDFYISD FQSGLRALVK TGSGAKVTPL VDDSVVIDFK QGSEQVSPDF VRWLGKKNLT
401: SDDRIMRLKE GYIKEGSTVS VIGVVQRNDN VLMIVPSSEP LAAGWQWRRC TFPTSLEGIV LRCEDSSNVD AIPV
Arabidopsis Description
Uncharacterized membrane protein At1g16860 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ45]
SUBAcon: [mitochondrion,plastid,vacuole,cytosol]
SUBAcon: [mitochondrion,plastid,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.