Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
- plasma membrane 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX79143 | Canola | cytosol, plasma membrane, plastid | 98.41 | 97.97 |
| CDX94089 | Canola | cytosol, plasma membrane, plastid | 92.74 | 92.53 |
| CDX98741 | Canola | cytosol, plasma membrane, plastid | 87.07 | 87.07 |
| AT4G22290.1 | Thale cress | cytosol, plasma membrane, plastid | 83.9 | 83.15 |
| CDY16692 | Canola | cytosol, plasma membrane, plastid | 70.52 | 72.66 |
| CDX94532 | Canola | cytosol, plasma membrane, plastid | 69.84 | 72.13 |
| KRH11512 | Soybean | plastid | 63.95 | 67.63 |
| KRH36527 | Soybean | plastid | 62.36 | 65.48 |
| Solyc04g014680.2.1 | Tomato | plastid | 61.0 | 61.98 |
| PGSC0003DMT400034711 | Potato | mitochondrion, plastid | 56.01 | 57.04 |
| Solyc11g012040.1.1 | Tomato | plastid | 56.01 | 57.04 |
| PGSC0003DMT400060565 | Potato | plastid | 61.68 | 52.82 |
| CDX83939 | Canola | cytosol, plastid, vacuole | 50.79 | 47.76 |
| CDX96804 | Canola | plastid | 50.34 | 47.23 |
| CDY35123 | Canola | plastid | 49.89 | 47.21 |
| CDY40028 | Canola | plastid | 50.11 | 47.12 |
| CDY26883 | Canola | mitochondrion, plastid, vacuole | 48.98 | 45.86 |
| CDY14586 | Canola | plastid | 48.98 | 45.86 |
| CDX83594 | Canola | plastid | 48.98 | 45.86 |
| CDX87427 | Canola | mitochondrion, plastid, vacuole | 48.07 | 45.3 |
| CDX88486 | Canola | mitochondrion, plastid, vacuole | 47.85 | 45.09 |
| GSMUA_Achr5P19960_001 | Banana | extracellular, plasma membrane, vacuole | 23.58 | 35.99 |
| Os04t0541900-00 | Rice | cytosol, golgi, peroxisome | 24.94 | 34.59 |
| VIT_15s0048g02880.t01 | Wine grape | plasma membrane | 25.62 | 34.56 |
| Zm00001d025966_P001 | Maize | golgi, peroxisome, plasma membrane | 24.94 | 34.38 |
| EES11199 | Sorghum | cytosol, endoplasmic reticulum, golgi | 25.4 | 33.84 |
| CDY33180 | Canola | cytosol | 11.34 | 33.78 |
| TraesCS2B01G407700.1 | Wheat | golgi, peroxisome, vacuole | 24.04 | 33.12 |
| TraesCS2D01G387400.1 | Wheat | golgi, plasma membrane, vacuole | 23.58 | 32.91 |
| TraesCS2A01G389500.1 | Wheat | golgi, plasma membrane, vacuole | 23.58 | 32.7 |
| HORVU2Hr1G092730.3 | Barley | endoplasmic reticulum | 20.86 | 31.29 |
| Zm00001d046644_P001 | Maize | nucleus, plasma membrane, plastid | 5.67 | 7.04 |
| TraesCS7B01G290800.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 5.67 | 6.13 |
| KXG20435 | Sorghum | nucleus, plasma membrane, plastid | 5.67 | 6.13 |
| TraesCS7D01G384800.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 5.67 | 6.1 |
| TraesCS7A01G388900.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 5.67 | 6.1 |
| HORVU0Hr1G022000.9 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX82929 | EnsemblPlantsGene:GSBRNA2T00138316001 | GO:A0A078D3V1 | PANTHER:PTHR33709 | PANTHER:PTHR33709:SF2 | ProteinID:CDX82929 |
| ProteinID:CDX82929.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EE29E9 | MapMan:35.1 | : |
Description
BnaC01g13790D
Coordinates
chrLK031830:-:1390403..1392452
Molecular Weight (calculated)
47006.8 Da
IEP (calculated)
10.374
GRAVY (calculated)
-0.115
Length
441 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGRIQSHQL PNGLFVSGKL EQPKEPRPPT MAARAMPYTG GDIKKSGELG RMFDISVLDP QGPPPPLIVG GNSSGGNSRQ MAPPRVSGSS SNPNSGSRPN
101: SGTVKKSSGP LSQLQPTGLI TSGSLGGSGP IGSGSRRSGQ MDRQFSNLGS SKAKYGSSVT SLSTDPVRVG FKVPKTVVWA VMIVAAMGLL VGAFLTVAVK
201: KPVVIAAVIA AVVPAVVVLV WNCVWGRKGL LGFIKKYPDA ELRGAIDGQF VKVTGVVTCG SIPLETSYQR TPRCVYVSTE LYEYKGLGGR SANSKHRCFS
301: WGSRHAEKYV SDFYVSDFQS GLRALVKAGY GAKVSPFVKP ATVADVTTRN KDLSPSFLKW LSDRNLSADN RVMRLKEGYI KEGSTVSVMG MVRRHDNVLM
401: IVPPTEAVSS GCRWWHCLLP TYADGLIITC DDNQNADVIP V
101: SGTVKKSSGP LSQLQPTGLI TSGSLGGSGP IGSGSRRSGQ MDRQFSNLGS SKAKYGSSVT SLSTDPVRVG FKVPKTVVWA VMIVAAMGLL VGAFLTVAVK
201: KPVVIAAVIA AVVPAVVVLV WNCVWGRKGL LGFIKKYPDA ELRGAIDGQF VKVTGVVTCG SIPLETSYQR TPRCVYVSTE LYEYKGLGGR SANSKHRCFS
301: WGSRHAEKYV SDFYVSDFQS GLRALVKAGY GAKVSPFVKP ATVADVTTRN KDLSPSFLKW LSDRNLSADN RVMRLKEGYI KEGSTVSVMG MVRRHDNVLM
401: IVPPTEAVSS GCRWWHCLLP TYADGLIITC DDNQNADVIP V
001: MAGRIQSHQL PNGLYVSGKL EQPKERPPTM AARAVPYTGG DIKKSGELGR MFDISVVDSA SFQGPPPLIV GGNSSGGTSR LQAPPRVSGS SSNPNSGSVR
101: SGPNSGSVKK FSGPLSQLQP TGLITSGSLG SSGPILSGSR RSGQLDHQLS NLASSKPKYG SSVTSLNVDP VRVGFKVPKA MVWAVLIVAA MGLLVGAFLT
201: VAVKKPVVIA AVLAAVCPAI VVLVWNCVWR RKGLLSFIKK YPDAELRGAI DGQFVKVTGV VTCGSIPLES SFQRTPRCVY VSTELYEYKG FGGKSANPKH
301: RCFSWGSRHA EKYVSDFYIS DFQSGLRALV KAGYGSKVSP FVKPATVANV TTQNKDLSPS FLKWLSDRNL SADDRVMRLK EGYIKEGSTV SVMGMVRRHD
401: NVLMIVPPAE AVSSGCRWWH CLFPTYADGL IITCDDNQNA DVIPV
101: SGPNSGSVKK FSGPLSQLQP TGLITSGSLG SSGPILSGSR RSGQLDHQLS NLASSKPKYG SSVTSLNVDP VRVGFKVPKA MVWAVLIVAA MGLLVGAFLT
201: VAVKKPVVIA AVLAAVCPAI VVLVWNCVWR RKGLLSFIKK YPDAELRGAI DGQFVKVTGV VTCGSIPLES SFQRTPRCVY VSTELYEYKG FGGKSANPKH
301: RCFSWGSRHA EKYVSDFYIS DFQSGLRALV KAGYGSKVSP FVKPATVANV TTQNKDLSPS FLKWLSDRNL SADDRVMRLK EGYIKEGSTV SVMGMVRRHD
401: NVLMIVPPAE AVSSGCRWWH CLFPTYADGL IITCDDNQNA DVIPV
Arabidopsis Description
At4g22290 [Source:UniProtKB/TrEMBL;Acc:Q8L6X7]
SUBAcon: [plasma membrane,plastid,cytosol]
SUBAcon: [plasma membrane,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.