Factsheet for Zm00001d046644_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, nucleus

Predictor Summary:

nucleus 1
mitochondrion 1
plasma membrane 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plasma membrane, plastid
Any Predictor:	mitochondrion, nucleus, plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG20435	Sorghum	nucleus, plasma membrane, plastid	83.66	72.79
TraesCS7D01G384800.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	71.55	61.95
TraesCS7B01G290800.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	70.7	61.52
TraesCS7A01G388900.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	70.7	61.22
CDX98741	Canola	cytosol, plasma membrane, plastid	8.17	6.58
CDX94532	Canola	cytosol, plasma membrane, plastid	7.89	6.56
CDY16692	Canola	cytosol, plasma membrane, plastid	7.89	6.54
AT4G22290.1	Thale cress	cytosol, plasma membrane, plastid	7.89	6.29
KRH11512	Soybean	plastid	6.76	5.76
KRH36527	Soybean	plastid	6.76	5.71
CDX82929	Canola	cytosol, plasma membrane, plastid	7.04	5.67
Bra019387.1-P	Field mustard	cytosol, plasma membrane, plastid	7.04	5.66
CDX94089	Canola	cytosol, plasma membrane, plastid	7.04	5.66
Bra013607.1-P	Field mustard	cytosol, plasma membrane, plastid	7.04	5.64
CDX79143	Canola	cytosol, plasma membrane, plastid	7.04	5.64
Zm00001d026258_P001	Maize	cytosol, plastid, vacuole	7.04	5.19
Zm00001d024364_P001	Maize	plasma membrane	7.04	5.05
Zm00001d050191_P003	Maize	plasma membrane	6.76	5.02
Zm00001d002391_P005	Maize	cytosol, plasma membrane, plastid	6.76	4.59
Bra029474.1-P	Field mustard	cytosol, plasma membrane, plastid	4.79	4.27
Zm00001d025966_P001	Maize	golgi, peroxisome, plasma membrane	2.25	2.5

Protein Annotations

EnsemblPlants:Zm00001d046644_P001	EnsemblPlants:Zm00001d046644_T001	EnsemblPlantsGene:Zm00001d046644	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0019538	PANTHER:PTHR33709	PANTHER:PTHR33709:SF2	ProteinID:AQL04789.1	SEG:seg
TMHMM:TMhelix	UniParc:UPI0002208CB1	UniProt:K7WAS9	MapMan:35.2	:	:

Description

Ubiquitin-specific protease family C19-related protein

Coordinates

chr9:+:100188815..100191441

Molecular Weight (calculated)

36853.0 Da

IEP (calculated)

9.284

GRAVY (calculated)

-0.067

Length

355 amino acids

Sequence
(BLAST)

001: MHQIGSGMYV SGPAPDRKRE RRLSSGSAAT PPYTGGDVAR SGELGRMFDI AASQSQAPSP ASSRRSSGPL PRPSPSPASG PLSQLSHPGL LVGPSPSPAP
101: SPSPAVGSSR KGSGRRRGAG NEAGAAVAAR GTARLGVPFA CYVLVAVAAA AAVGAGAFCL VSWRRWEVLA AAGGAVAAVA AVFASNACRT AAEAERFFRR
201: FPDTVFDDHG GDMPIGELVK ITGARVTNFY ISDRNSGKRF YVRAGESALI TPMIKQKTIS FDGDKKDASQ NLKRLLATNE LSCNGDLTVK EGLIREGDTA
301: SVIGILKKHH ACDIVDAPAG VVTTGCQLIR CMFPVFVEGL ILIGDEDPDE AVYMV

Best Arabidopsis Sequence Match ( AT4G22290.1 )
(BLAST)

001: MAGRIQSHQL PNGLYVSGKL EQPKERPPTM AARAVPYTGG DIKKSGELGR MFDISVVDSA SFQGPPPLIV GGNSSGGTSR LQAPPRVSGS SSNPNSGSVR
101: SGPNSGSVKK FSGPLSQLQP TGLITSGSLG SSGPILSGSR RSGQLDHQLS NLASSKPKYG SSVTSLNVDP VRVGFKVPKA MVWAVLIVAA MGLLVGAFLT
201: VAVKKPVVIA AVLAAVCPAI VVLVWNCVWR RKGLLSFIKK YPDAELRGAI DGQFVKVTGV VTCGSIPLES SFQRTPRCVY VSTELYEYKG FGGKSANPKH
301: RCFSWGSRHA EKYVSDFYIS DFQSGLRALV KAGYGSKVSP FVKPATVANV TTQNKDLSPS FLKWLSDRNL SADDRVMRLK EGYIKEGSTV SVMGMVRRHD
401: NVLMIVPPAE AVSSGCRWWH CLFPTYADGL IITCDDNQNA DVIPV

Arabidopsis Description

At4g22290 [Source:UniProtKB/TrEMBL;Acc:Q8L6X7]
SUBAcon: [plasma membrane,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.