Factsheet for TraesCS7D01G384800.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, peroxisome

Predictor Summary:

cytosol 1
mitochondrion 1
endoplasmic reticulum 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, peroxisome
Any Predictor:	cytosol, endoplasmic reticulum, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G290800.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	97.32	97.79
TraesCS7A01G388900.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	97.07	97.07
Zm00001d046644_P001	Maize	nucleus, plasma membrane, plastid	61.95	71.55
KXG20435	Sorghum	nucleus, plasma membrane, plastid	67.07	67.4
Bra019387.1-P	Field mustard	cytosol, plasma membrane, plastid	6.34	5.88
CDX94089	Canola	cytosol, plasma membrane, plastid	6.34	5.88
CDX94532	Canola	cytosol, plasma membrane, plastid	6.1	5.85
AT4G22290.1	Thale cress	cytosol, plasma membrane, plastid	6.34	5.84
CDY16692	Canola	cytosol, plasma membrane, plastid	6.1	5.84
KRH11512	Soybean	plastid	5.85	5.76
KRH36527	Soybean	plastid	5.85	5.71
CDX82929	Canola	cytosol, plasma membrane, plastid	6.1	5.67
CDX79143	Canola	cytosol, plasma membrane, plastid	6.1	5.64
Bra013607.1-P	Field mustard	cytosol, plasma membrane, plastid	6.1	5.64
TraesCS2D01G429600.1	Wheat	cytosol, nucleus, plastid	5.85	5.49
CDX98741	Canola	cytosol, plasma membrane, plastid	5.85	5.44
TraesCS7D01G282000.3	Wheat	mitochondrion	6.34	5.21
TraesCS2D01G429500.1	Wheat	cytosol, plasma membrane, plastid	6.1	5.18
Bra029474.1-P	Field mustard	cytosol, plasma membrane, plastid	3.9	4.02
TraesCS2D01G387400.1	Wheat	golgi, plasma membrane, vacuole	0.73	0.95

Protein Annotations

EnsemblPlants:TraesCS7D01G384800.1	EnsemblPlantsGene:TraesCS7D01G384800	PANTHER:PTHR33709	PANTHER:PTHR33709:SF2	SEG:seg	TMHMM:TMhelix
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr7D:+:498711847..498713821

Molecular Weight (calculated)

43401.7 Da

IEP (calculated)

9.852

GRAVY (calculated)

-0.089

Length

410 amino acids

Sequence
(BLAST)

001: MHQIGSGMYV SGRAPDRKRE RHLSSGSVAT PPYTGGDLSR SGELGRMFDV ASSAWQSQAP SPASSSRRSS GHLPLPPRPA PSPSASGPLS QLSHSGLLVG
101: PSPPAAPSPS PARGGSWRKA SRRRAAAMEE AAPVVARGST RLGVPFACYV LVLVAAAAGV GAGLFFLVAW RRWEVLAAAG GAVAAAAAVL SWNFLRCAAE
201: AERFFRLSPD TVFEQGDMPI GELVKITGQV TCGRVPVGAC FHDAARCVFT SVRMYGRRGW AWACCCSRWQ LRHSEARSTN FYISDRNSGR RFYVRAGEGA
301: KITWMINRKT ISFDGGDGKG KGASRSLKSW AASSGVSCDG AVRVEEGFIR EGDTASVIGV LKRHHAFDVV DAPDGVVASS CQPARCMFPV LVEGLVLIGS
401: DDPDEGVYMV

Best Arabidopsis Sequence Match ( AT1G16860.1 )
(BLAST)

001: MGSRYPSHQL SNGLFVSGRP EQPKERAPTM SAVAMPYTGG DIKRSGELGK MFDIPADGTK SRKSGPIPGA PSRSGSFAGT AQSGPGAPMA TGRMSGSLAS
101: AGSVSMKKTN SGPLSKHGEP LKKSSGPQSG GVTRQNSGSI PILPATGLIT SGPITSGPLN SSGAPRKVSG PLDSSGLMKS HMPTVVHNQA VTTLGPEDDF
201: SCLKSFPKPV LWLVVLIFIM GFLAGGFILG AVHNPILLVV VAILFTVVAA LFIWNICWGR RGITDFIARY PDADLRTAKN GQHVKVTGVV TCGNVPLESS
301: FHRVPRCVYT STCLYEYRGW GSKPANSSHR HFTWGLRSSE RHVVDFYISD FQSGLRALVK TGSGAKVTPL VDDSVVIDFK QGSEQVSPDF VRWLGKKNLT
401: SDDRIMRLKE GYIKEGSTVS VIGVVQRNDN VLMIVPSSEP LAAGWQWRRC TFPTSLEGIV LRCEDSSNVD AIPV

Arabidopsis Description

Uncharacterized membrane protein At1g16860 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ45]
SUBAcon: [mitochondrion,plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.