Factsheet for Bra013607.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 1
plastid 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79143	Canola	cytosol, plasma membrane, plastid	99.77	99.77
Bra019387.1-P	Field mustard	cytosol, plasma membrane, plastid	92.33	92.53
AT4G22290.1	Thale cress	cytosol, plasma membrane, plastid	83.97	83.6
Bra029474.1-P	Field mustard	cytosol, plasma membrane, plastid	63.88	71.11
KRH11512	Soybean	plastid	63.43	67.39
KRH36527	Soybean	plastid	61.85	65.24
Solyc04g014680.2.1	Tomato	plastid	60.95	62.21
Solyc11g012040.1.1	Tomato	plastid	55.98	57.27
PGSC0003DMT400034711	Potato	mitochondrion, plastid	55.98	57.27
PGSC0003DMT400060565	Potato	plastid	61.63	53.01
Bra016629.1-P	Field mustard	plastid	49.89	47.02
Bra026021.1-P	Field mustard	plastid	49.44	47.0
Bra008384.1-P	Field mustard	plastid	41.53	43.91
Bra035072.1-P	Field mustard	plasma membrane	46.73	37.23
GSMUA_Achr5P19960_001	Banana	extracellular, plasma membrane, vacuole	23.48	35.99
Os04t0541900-00	Rice	cytosol, golgi, peroxisome	24.83	34.59
VIT_15s0048g02880.t01	Wine grape	plasma membrane	25.51	34.56
EES11199	Sorghum	cytosol, endoplasmic reticulum, golgi	25.28	33.84
Zm00001d025966_P001	Maize	golgi, peroxisome, plasma membrane	24.38	33.75
TraesCS2B01G407700.1	Wheat	golgi, peroxisome, vacuole	23.93	33.12
TraesCS2D01G387400.1	Wheat	golgi, plasma membrane, vacuole	23.48	32.91
TraesCS2A01G389500.1	Wheat	golgi, plasma membrane, vacuole	23.48	32.7
HORVU2Hr1G092730.3	Barley	endoplasmic reticulum	20.77	31.29
Zm00001d046644_P001	Maize	nucleus, plasma membrane, plastid	5.64	7.04
TraesCS7B01G290800.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	5.64	6.13
KXG20435	Sorghum	nucleus, plasma membrane, plastid	5.64	6.13
TraesCS7D01G384800.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	5.64	6.1
TraesCS7A01G388900.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	5.64	6.1
HORVU0Hr1G022000.9	Barley	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Bra013607.1	EnsemblPlants:Bra013607.1-P	EnsemblPlantsGene:Bra013607	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR33709	PANTHER:PTHR33709:SF2	SEG:seg	TMHMM:TMhelix	UniParc:UPI000254572F	UniProt:M4DAU7
MapMan:35.1	:	:	:	:	:

Description

AT4G22290 (E=7e-189) | ubiquitin thiolesterase

Coordinates

chrA01:-:6607923..6609726

Molecular Weight (calculated)

47060.9 Da

IEP (calculated)

10.355

GRAVY (calculated)

-0.095

Length

443 amino acids

Sequence
(BLAST)

001: MAGRIQSHQL PNGLFVSGKL EQPKEPRPPT MAARAVPYTG GDIKKSGELG RMFDISVLDP QGPPPPPPLI VGGNSSGGNS RQMAPPRVSG SSSNPNSGSR
101: PNSGTVKKSS GPLSQLQPTG LITSGSLGGS GPIGSGSRRS GQMDRQVSNL GSSKAKYGSS VTSLSADPVR VGFKVPKTVV WAVMIVAAMG LLVGAFLTVA
201: VKKPVVIAAV IAAVVPAVVV LVWNCVWGRK GLLGFIKKYP DAELRGAIDG QFVKVTGVVT CGSIPLETSY QRTPRCVFVS TELYEYKGLG GRSANSKHRC
301: FSWGSRHAEK YVSDFYISDF QSGLRALVKA GYGAKVSPFV KPATVADVTT QNKDLSPSFL KWLSDRNLSA DNRVMRLKEG YIKEGSTVSV MGMVRRHDNV
401: LMIVPPTEAV SSGCRWWHCL LPTYADGLII TCDDNQNADV IPV

Best Arabidopsis Sequence Match ( AT4G22290.1 )
(BLAST)

001: MAGRIQSHQL PNGLYVSGKL EQPKERPPTM AARAVPYTGG DIKKSGELGR MFDISVVDSA SFQGPPPLIV GGNSSGGTSR LQAPPRVSGS SSNPNSGSVR
101: SGPNSGSVKK FSGPLSQLQP TGLITSGSLG SSGPILSGSR RSGQLDHQLS NLASSKPKYG SSVTSLNVDP VRVGFKVPKA MVWAVLIVAA MGLLVGAFLT
201: VAVKKPVVIA AVLAAVCPAI VVLVWNCVWR RKGLLSFIKK YPDAELRGAI DGQFVKVTGV VTCGSIPLES SFQRTPRCVY VSTELYEYKG FGGKSANPKH
301: RCFSWGSRHA EKYVSDFYIS DFQSGLRALV KAGYGSKVSP FVKPATVANV TTQNKDLSPS FLKWLSDRNL SADDRVMRLK EGYIKEGSTV SVMGMVRRHD
401: NVLMIVPPAE AVSSGCRWWH CLFPTYADGL IITCDDNQNA DVIPV

Arabidopsis Description

At4g22290 [Source:UniProtKB/TrEMBL;Acc:Q8L6X7]
SUBAcon: [plasma membrane,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.