CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, cytosol

Predictor Summary:

nucleus 2
golgi 2
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, golgi
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025966_P001	Maize	golgi, peroxisome, plasma membrane	79.15	81.88
Os04t0541900-00	Rice	cytosol, golgi, peroxisome	75.83	78.93
TraesCS2A01G389500.1	Wheat	golgi, plasma membrane, vacuole	74.92	77.99
TraesCS2B01G407700.1	Wheat	golgi, peroxisome, vacuole	74.62	77.19
TraesCS2D01G387400.1	Wheat	golgi, plasma membrane, vacuole	73.41	76.9
HORVU2Hr1G092730.3	Barley	endoplasmic reticulum	62.24	70.07
GSMUA_Achr5P19960_001	Banana	extracellular, plasma membrane, vacuole	41.09	47.06
PGSC0003DMT400000687	Potato	endoplasmic reticulum, plasma membrane, plastid	37.16	43.93
Solyc01g096300.2.1	Tomato	endoplasmic reticulum, plasma membrane, plastid	36.25	42.86
VIT_15s0048g02880.t01	Wine grape	plasma membrane	40.18	40.67
KRH11512	Soybean	plastid	35.35	28.06
KRH36527	Soybean	plastid	35.35	27.86
CDX94089	Canola	cytosol, plasma membrane, plastid	35.95	26.92
CDX98741	Canola	cytosol, plasma membrane, plastid	35.35	26.53
Bra019387.1-P	Field mustard	cytosol, plasma membrane, plastid	35.35	26.47
EES12814	Sorghum	plastid	38.37	26.4
AT4G22290.1	Thale cress	cytosol, plasma membrane, plastid	34.74	25.84
CDX82929	Canola	cytosol, plasma membrane, plastid	33.84	25.4
Bra013607.1-P	Field mustard	cytosol, plasma membrane, plastid	33.84	25.28
CDX79143	Canola	cytosol, plasma membrane, plastid	33.84	25.28
Bra029474.1-P	Field mustard	cytosol, plasma membrane, plastid	29.31	24.37
CDX94532	Canola	cytosol, plasma membrane, plastid	31.42	24.36
CDY16692	Canola	cytosol, plasma membrane, plastid	31.42	24.3
KXG24772	Sorghum	cytosol, plasma membrane, plastid	35.05	24.27
KXG20435	Sorghum	nucleus, plasma membrane, plastid	3.02	2.45

Protein Annotations

EnsemblPlants:EES11199	EnsemblPlantsGene:SORBI_3006G164000	EntrezGene:8083336	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR33709	PANTHER:PTHR33709:SF1	ProteinID:EES11199	ProteinID:EES11199.1	RefSeq:XP_002446871.1	SEG:seg
TMHMM:TMhelix	UniParc:UPI0001A86F56	UniProt:C5YD15	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr6:+:52177256..52179742

Molecular Weight (calculated)

34839.9 Da

IEP (calculated)

7.805

GRAVY (calculated)

0.265

Length

331 amino acids

Sequence
(BLAST)

001: MLPGRLGEDG KRRGATATAT ADEDATTDAD AATSASAASL NDLCATAAAG AAAGAPAPFP RTAAWAVAAL LAVGLGVGAL VLAVVHSAAL LVVALLLSAA
101: VAAFLLWNAA AAASGRALRR FVDGLQASSL RVAADGQLVK ITGFVSCGDI SLISSYEKVE NCVYTSTLLR KCARWGSVTL NPWNQCSKWK LAHAERFAAD
201: FYITDAKSGK RALVKAGHHS KVVPLIDENL LVTTSRDTEL SSTLKYWLEE RNLSSEEAQV IRLEEGYIRE GMRLSVIGML SKKNGDAMIL PPPEPLSTGF
301: VLLSCLLPSY FDGIVLRLVD RSYFVPNSGV S

Best Arabidopsis Sequence Match ( AT1G78880.1 )
(BLAST)

001: MGSRYASHQL SNGLFVSGRP EQPKEKPPTM SSVAMPYTGG DIKKSGELGK MFDIPTDGTK SRKSGPITGG SSRSGAQSGP VPNATGRMSG NLASAGSNSM
101: KKTNSGPLSK HGEPLKKSSG PQSGGVTRQN SGPIPILPTT GLITSGPITS GPLNSSGAPR KISGPLDYSG SMKTHMPSVV HNQAVTTLAP EDDFSCMKSF
201: PKPVLWLVIL IFVMGFLAGG FILGAVHNAI LLIVVAVLFT VVAALFIWNI SCERRGITDF IARYPDADLR TAKNGQYVKV TGVVTCGNVP LESSFHRVPR
301: CVYTSTCLYE YRGWGSKPAN ASHRRFTWGL RSAERHVVDF YISDFQSGLR ALVKTGNGAK VTPLVDDSVV IDFKPGNEQA SPDFVRWLGK KNLTNDDRIM
401: RLKEGYIKEG STVSVIGVVQ RNDNVLMIVP TTEPLAAGWQ WSKCTFPASL EGIVLRCEDS SNVDAIPV

Arabidopsis Description

F9K20.7 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZVA7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.