CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 1
plastid 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d050191_P003	Maize	plasma membrane	94.35	94.35
Zm00001d024364_P001	Maize	plasma membrane	94.77	91.52
Os08t0230200-01	Rice	cytosol, plastid	90.38	89.44
EES12814	Sorghum	plastid	86.19	85.65
HORVU7Hr1G061070.1	Barley	cytosol, plasma membrane, plastid	85.15	84.44
TraesCS7D01G282000.3	Wheat	mitochondrion	85.15	81.56
TraesCS7A01G283600.2	Wheat	mitochondrion	85.15	81.56
KRH44603	Soybean	cytosol	22.38	79.85
TraesCS7B01G176900.2	Wheat	plasma membrane	85.56	78.05
GSMUA_Achr9P22990_001	Banana	plastid	78.45	77.16
GSMUA_Achr1P10460_001	Banana	plastid	66.74	75.41
GSMUA_Achr7P04950_001	Banana	cytosol, plasma membrane, plastid	67.99	75.23
GSMUA_Achr3P27840_001	Banana	plastid	75.73	74.49
GSMUA_AchrUn_...	Banana	plastid	70.92	74.34
KRH46999	Soybean	plastid	73.85	73.85
VIT_11s0052g00020.t01	Wine grape	plastid	74.27	73.8
KRH44657	Soybean	plastid	73.43	73.43
KRH09609	Soybean	plastid	72.18	72.94
KRH23708	Soybean	plastid	73.01	72.41
GSMUA_Achr1P23590_001	Banana	plastid	69.87	72.29
Solyc12g017450.1.1	Tomato	cytosol, plasma membrane, plastid	69.87	70.76
PGSC0003DMT400025021	Potato	cytosol, plasma membrane, plastid	69.67	70.55
PGSC0003DMT400025018	Potato	cytosol, mitochondrion, plasma membrane, plastid	69.46	70.34
KRH47297	Soybean	cytosol, plasma membrane, plastid	70.92	70.04
AT1G78880.1	Thale cress	plastid	67.99	69.44
CDX96804	Canola	plastid	66.95	68.09
Bra016629.1-P	Field mustard	plastid	66.74	67.87
CDX83939	Canola	cytosol, plastid, vacuole	66.53	67.8
AT1G16860.1	Thale cress	cytosol, mitochondrion, plastid, vacuole	67.15	67.72
CDX87427	Canola	mitochondrion, plastid, vacuole	65.69	67.09
Bra026021.1-P	Field mustard	plastid	65.27	66.95
CDX88486	Canola	mitochondrion, plastid, vacuole	65.48	66.88
CDY35123	Canola	plastid	65.06	66.74
CDY40028	Canola	plastid	65.48	66.74
CDY14586	Canola	plastid	65.69	66.67
CDX83594	Canola	plastid	65.69	66.67
CDY26883	Canola	mitochondrion, plastid, vacuole	65.27	66.24
KRH44594	Soybean	cytosol, plasma membrane, plastid	48.54	66.1
Bra008384.1-P	Field mustard	plastid	55.65	63.48
Bra035072.1-P	Field mustard	plasma membrane	64.44	55.4
EES11199	Sorghum	cytosol, endoplasmic reticulum, golgi	24.27	35.05
KXG20435	Sorghum	nucleus, plasma membrane, plastid	5.44	6.37

Protein Annotations

EnsemblPlants:KXG24772	EnsemblPlantsGene:SORBI_3007G084200	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	PANTHER:PTHR33709
PANTHER:PTHR33709:SF4	ProteinID:KXG24772	ProteinID:KXG24772.1	ProteinID:KXG24773.1	SEG:seg	TMHMM:TMhelix
UniParc:UPI00022071D2	UniProt:A0A1B6PGF4	MapMan:21.1.1.3.1	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:10251746..10256359

Molecular Weight (calculated)

51086.3 Da

IEP (calculated)

9.850

GRAVY (calculated)

-0.133

Length

478 amino acids

Sequence
(BLAST)

001: MGSRFPSHQL SNGLYVSGRP EQPKEKAPVI CSSAMPYIGG DIKKSGELGK MFDLHRKSGQ LGNQPSRNTS FGGAGNNSGP VSNAVGRSNY SGSISSAVPG
101: TGGSSRTKSN SGPLNKHGEP TKRSSGPQSG GVTPMARQNS GPLPPILPTT GLITSGPITS GQLNSSGAQR KVSGPLDSSV SMKMRATSFA HNPAVTNLNV
201: GGGYSIKGSI PTTIIWLVGL LFLVGFVAGG FILAAIHNPI LLIVVVVIFG FVAALVTWNI CWGTKGVIGF ISRYPDADLR TAKDGEYVKV TGVVTCGNLP
301: LESSFQRVPR CVYTSTCLYE YRGWDSKAAN TTHRRFTWGL RSMERHAVDF YISDFQSGLR ALVRTGSGAR VTPYVDESVV IDINPDNKDM SPEFLRWLRG
401: RNLSSDDRIM RLKEGYIKEG STVSVMGVVQ RNENVLMIVP PAEPISTGCQ WAKCILPASL EGLVLRCEDT SDLDVIPV

Best Arabidopsis Sequence Match ( AT1G16860.1 )
(BLAST)

001: MGSRYPSHQL SNGLFVSGRP EQPKERAPTM SAVAMPYTGG DIKRSGELGK MFDIPADGTK SRKSGPIPGA PSRSGSFAGT AQSGPGAPMA TGRMSGSLAS
101: AGSVSMKKTN SGPLSKHGEP LKKSSGPQSG GVTRQNSGSI PILPATGLIT SGPITSGPLN SSGAPRKVSG PLDSSGLMKS HMPTVVHNQA VTTLGPEDDF
201: SCLKSFPKPV LWLVVLIFIM GFLAGGFILG AVHNPILLVV VAILFTVVAA LFIWNICWGR RGITDFIARY PDADLRTAKN GQHVKVTGVV TCGNVPLESS
301: FHRVPRCVYT STCLYEYRGW GSKPANSSHR HFTWGLRSSE RHVVDFYISD FQSGLRALVK TGSGAKVTPL VDDSVVIDFK QGSEQVSPDF VRWLGKKNLT
401: SDDRIMRLKE GYIKEGSTVS VIGVVQRNDN VLMIVPSSEP LAAGWQWRRC TFPTSLEGIV LRCEDSSNVD AIPV

Arabidopsis Description

Uncharacterized membrane protein At1g16860 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ45]
SUBAcon: [mitochondrion,plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.