Factsheet for GSMUA_Achr7P04950_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

nucleus 1
endoplasmic reticulum 1
cytosol 1
plastid 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	plastid	87.5	82.89
GSMUA_Achr1P10460_001	Banana	plastid	79.17	80.85
GSMUA_Achr1P23590_001	Banana	plastid	85.19	79.65
GSMUA_Achr9P22990_001	Banana	plastid	82.41	73.25
Zm00001d026258_P001	Maize	cytosol, plastid, vacuole	80.56	72.2
EES12814	Sorghum	plastid	80.09	71.93
Os08t0230200-01	Rice	cytosol, plastid	80.32	71.84
GSMUA_Achr5P04950_001	Banana	cytosol, plasma membrane, plastid	74.07	70.02
VIT_11s0052g00020.t01	Wine grape	plastid	77.08	69.23
GSMUA_Achr3P27840_001	Banana	plastid	77.31	68.72
HORVU7Hr1G061070.1	Barley	cytosol, plasma membrane, plastid	76.39	68.46
GSMUA_Achr9P13890_001	Banana	plastid	61.11	68.04
KXG24772	Sorghum	cytosol, plasma membrane, plastid	75.23	67.99
Zm00001d050191_P003	Maize	plasma membrane	75.0	67.78
Os04t0606500-01	Rice	plasma membrane	75.23	67.43
Zm00001d002391_P005	Maize	cytosol, plasma membrane, plastid	80.56	66.54
TraesCS7A01G283600.2	Wheat	mitochondrion	76.62	66.33
TraesCS7D01G282000.3	Wheat	mitochondrion	76.16	65.93
Zm00001d024364_P001	Maize	plasma membrane	75.23	65.66
TraesCS2D01G429600.1	Wheat	cytosol, nucleus, plastid	65.51	64.76
TraesCS2A01G431600.1	Wheat	cytosol, nucleus, plastid	65.05	64.3
PGSC0003DMT400025018	Potato	cytosol, mitochondrion, plasma membrane, plastid	70.14	64.19
PGSC0003DMT400025021	Potato	cytosol, plasma membrane, plastid	70.14	64.19
TraesCS2B01G453000.2	Wheat	cytosol, plasma membrane, plastid	71.76	64.18
Solyc12g017450.1.1	Tomato	cytosol, plasma membrane, plastid	69.91	63.98
TraesCS2B01G453100.1	Wheat	cytosol, nucleus, plastid	64.58	63.84
HORVU2Hr1G100660.2	Barley	cytosol, plasma membrane, plastid	71.3	63.77
TraesCS2D01G429500.1	Wheat	cytosol, plasma membrane, plastid	71.06	63.56
TraesCS2A01G431500.2	Wheat	cytosol, plasma membrane, plastid	70.83	63.35
TraesCS7B01G176900.2	Wheat	plasma membrane	76.62	63.17
HORVU2Hr1G100700.2	Barley	plastid	63.43	62.7
GSMUA_Achr5P19960_001	Banana	extracellular, plasma membrane, vacuole	25.69	38.41
GSMUA_Achr3P28220_001	Banana	mitochondrion	9.03	8.52
GSMUA_Achr4P20140_001	Banana	mitochondrion, plasma membrane, plastid	8.1	8.45

Protein Annotations

EnsemblPlants:GSMUA_Achr7P04950_001	EnsemblPlants:GSMUA_Achr7T04950_001	EnsemblPlantsGene:GSMUA_Achr7G04950_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR33709	PANTHER:PTHR33709:SF4	SEG:seg	TMHMM:TMhelix	UniParc:UPI000296DC7C	UniProt:M0TET5
MapMan:21.1.1.3.1	:	:	:	:	:

Description

Uncharacterized membrane protein At1g16860 [Source:GMGC_GENE;Acc:GSMUA_Achr7G04950_001]

Coordinates

chr7:-:3713700..3718996

Molecular Weight (calculated)

47150.8 Da

IEP (calculated)

9.407

GRAVY (calculated)

-0.104

Length

432 amino acids

Sequence
(BLAST)

001: MGSRFPSHQL SNGLYVSGRP EQPKEKPPVI CSTAMPYTGG DIKKSGELGK MFDLHVEKSR KSGPLSNTPS RNRSFGGSGS SFVTGVTPMA RQNSGPLPPV
101: LPTTGLITSG PISSGPLNSS GAPRKVSGSL DSTKSMKPHS TSIVHNQAVT NLTQENDYLF KGTLPKPILW SVILLFVMGF IAGGFILGAV QNAILLIVVV
201: TIFGVVIVLS FWNTCFGRRA IVGFIAQYPD ADLRNAKDGQ YVKVSGVVTC GNFPLESSYH KVPRCVYTST GLYEYRGWNS RAANSQRRCF TWGLRSMERH
301: VVDFYISDFQ SGLRALVKAG YGSKVTPYVD ESIVIDVNPN NMDLSPEFLR WLQERNLSSD DRMMRLKEGY VKEGSTVSVM GIVQKNENVL MIVPPSEPFS
401: TGCQWAKCIV PSSLDGIILR CEDTSNVDVI PV

Best Arabidopsis Sequence Match ( AT4G22290.1 )
(BLAST)

001: MAGRIQSHQL PNGLYVSGKL EQPKERPPTM AARAVPYTGG DIKKSGELGR MFDISVVDSA SFQGPPPLIV GGNSSGGTSR LQAPPRVSGS SSNPNSGSVR
101: SGPNSGSVKK FSGPLSQLQP TGLITSGSLG SSGPILSGSR RSGQLDHQLS NLASSKPKYG SSVTSLNVDP VRVGFKVPKA MVWAVLIVAA MGLLVGAFLT
201: VAVKKPVVIA AVLAAVCPAI VVLVWNCVWR RKGLLSFIKK YPDAELRGAI DGQFVKVTGV VTCGSIPLES SFQRTPRCVY VSTELYEYKG FGGKSANPKH
301: RCFSWGSRHA EKYVSDFYIS DFQSGLRALV KAGYGSKVSP FVKPATVANV TTQNKDLSPS FLKWLSDRNL SADDRVMRLK EGYIKEGSTV SVMGMVRRHD
401: NVLMIVPPAE AVSSGCRWWH CLFPTYADGL IITCDDNQNA DVIPV

Arabidopsis Description

At4g22290 [Source:UniProtKB/TrEMBL;Acc:Q8L6X7]
SUBAcon: [plasma membrane,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.