Factsheet for GSMUA_AchrUn_randomP04480_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P04950_001	Banana	cytosol, plasma membrane, plastid	82.89	87.5
GSMUA_Achr1P23590_001	Banana	plastid	82.68	81.6
GSMUA_Achr1P10460_001	Banana	plastid	73.9	79.67
GSMUA_Achr9P22990_001	Banana	plastid	82.89	77.78
GSMUA_Achr5P04950_001	Banana	cytosol, plasma membrane, plastid	75.88	75.71
EES12814	Sorghum	plastid	79.82	75.68
Zm00001d026258_P001	Maize	cytosol, plastid, vacuole	79.82	75.52
Os08t0230200-01	Rice	cytosol, plastid	78.95	74.53
VIT_11s0052g00020.t01	Wine grape	plastid	77.19	73.18
GSMUA_Achr3P27840_001	Banana	plastid	77.63	72.84
GSMUA_Achr9P13890_001	Banana	plastid	61.18	71.91
Os04t0606500-01	Rice	plasma membrane	75.0	70.95
KXG24772	Sorghum	cytosol, plasma membrane, plastid	74.34	70.92
HORVU7Hr1G061070.1	Barley	cytosol, plasma membrane, plastid	74.56	70.54
Solyc12g017450.1.1	Tomato	cytosol, plasma membrane, plastid	72.59	70.13
PGSC0003DMT400025021	Potato	cytosol, plasma membrane, plastid	72.59	70.13
Zm00001d050191_P003	Maize	plasma membrane	73.46	70.08
Zm00001d002391_P005	Maize	cytosol, plasma membrane, plastid	80.26	69.98
PGSC0003DMT400025018	Potato	cytosol, mitochondrion, plasma membrane, plastid	71.49	69.07
TraesCS2D01G429600.1	Wheat	cytosol, nucleus, plastid	66.01	68.88
TraesCS7A01G283600.2	Wheat	mitochondrion	74.56	68.14
TraesCS2B01G453000.2	Wheat	cytosol, plasma membrane, plastid	72.15	68.12
HORVU2Hr1G100660.2	Barley	cytosol, plasma membrane, plastid	71.93	67.91
TraesCS2D01G429500.1	Wheat	cytosol, plasma membrane, plastid	71.93	67.91
TraesCS7D01G282000.3	Wheat	mitochondrion	74.12	67.74
TraesCS2B01G453100.1	Wheat	cytosol, nucleus, plastid	64.91	67.73
TraesCS2A01G431500.2	Wheat	cytosol, plasma membrane, plastid	71.71	67.7
TraesCS2A01G431600.1	Wheat	cytosol, nucleus, plastid	64.69	67.51
Zm00001d024364_P001	Maize	plasma membrane	73.03	67.27
HORVU2Hr1G100700.2	Barley	plastid	64.25	67.05
TraesCS7B01G176900.2	Wheat	plasma membrane	74.56	64.89
GSMUA_Achr5P19960_001	Banana	extracellular, plasma membrane, vacuole	25.0	39.45
GSMUA_Achr3P28220_001	Banana	mitochondrion	8.33	8.3
GSMUA_Achr4P20140_001	Banana	mitochondrion, plasma membrane, plastid	7.46	8.21

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP04480_001	EnsemblPlants:GSMUA_AchrUn_randomT04480_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG04480_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
ncoils:Coil	PANTHER:PTHR33709	PANTHER:PTHR33709:SF4	SEG:seg	TMHMM:TMhelix	UniParc:UPI00029501CD
UniProt:M0U6B0	MapMan:21.1.1.3.1	:	:	:	:

Description

Uncharacterized membrane protein At1g16860 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG04480_001]

Coordinates

chrchrUn_random:-:18220008..18222407

Molecular Weight (calculated)

49492.5 Da

IEP (calculated)

10.012

GRAVY (calculated)

-0.225

Length

456 amino acids

Sequence
(BLAST)

001: MGSRFPSHQL SNGLYVSGRP EQPKEKSPTI CSTAMPYTGG DIKKSGEIGK MFELHVEKSR KSGPLANVPS RNRSFGSGSS LVTGGSGRQK SNSGPLKHGD
101: SVKKSSGPQS GGVTQMARQN SGPLLPTTGL ITSGPISSGP LNSSGAPRKL SGPLESTKSM KLHNASIVHN QAVTNLSQEN DQLFKGSFPK PILWSVILLF
201: VMGFIAGGFI LGAVHNPILL LLVVTILGVV VMLSFWNTCF GRRAIIGFIA QYPDADLRTA KDGQYVKVSG VVTCGNFPLE SSYHKVPRCV YTSTGLYEYR
301: GWNSKTANPQ HRRFTWGLRT VERHVVDFYI SDFQSGLRAL VKAGYGSKVT PYVDESLIVD INPNNKDLSP EFLRWLQERS LSSDDREMRL KEGYVKEGST
401: VSVMGVVRKN DNVLMIVPPS EPISTGCQWA KCIAPANLNG IVLRCEDTSN VDVIPV

Best Arabidopsis Sequence Match ( AT1G16860.1 )
(BLAST)

001: MGSRYPSHQL SNGLFVSGRP EQPKERAPTM SAVAMPYTGG DIKRSGELGK MFDIPADGTK SRKSGPIPGA PSRSGSFAGT AQSGPGAPMA TGRMSGSLAS
101: AGSVSMKKTN SGPLSKHGEP LKKSSGPQSG GVTRQNSGSI PILPATGLIT SGPITSGPLN SSGAPRKVSG PLDSSGLMKS HMPTVVHNQA VTTLGPEDDF
201: SCLKSFPKPV LWLVVLIFIM GFLAGGFILG AVHNPILLVV VAILFTVVAA LFIWNICWGR RGITDFIARY PDADLRTAKN GQHVKVTGVV TCGNVPLESS
301: FHRVPRCVYT STCLYEYRGW GSKPANSSHR HFTWGLRSSE RHVVDFYISD FQSGLRALVK TGSGAKVTPL VDDSVVIDFK QGSEQVSPDF VRWLGKKNLT
401: SDDRIMRLKE GYIKEGSTVS VIGVVQRNDN VLMIVPSSEP LAAGWQWRRC TFPTSLEGIV LRCEDSSNVD AIPV

Arabidopsis Description

Uncharacterized membrane protein At1g16860 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ45]
SUBAcon: [cytosol,plastid,vacuole,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.