Factsheet for TraesCS7B01G176900.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G282000.3	Wheat	mitochondrion	94.27	99.0
TraesCS7A01G283600.2	Wheat	mitochondrion	94.27	99.0
HORVU7Hr1G061070.1	Barley	cytosol, plasma membrane, plastid	90.84	98.76
Os08t0230200-01	Rice	cytosol, plastid	81.11	87.99
KXG24772	Sorghum	cytosol, plasma membrane, plastid	78.05	85.56
Zm00001d050191_P003	Maize	plasma membrane	76.72	84.1
Zm00001d024364_P001	Maize	plasma membrane	77.1	81.62
TraesCS2B01G453100.1	Wheat	cytosol, nucleus, plastid	64.5	77.35
GSMUA_Achr7P04950_001	Banana	cytosol, plasma membrane, plastid	63.17	76.62
GSMUA_Achr9P22990_001	Banana	plastid	70.99	76.54
TraesCS2B01G453000.2	Wheat	cytosol, plasma membrane, plastid	70.23	76.19
GSMUA_AchrUn_...	Banana	plastid	64.89	74.56
GSMUA_Achr1P10460_001	Banana	plastid	60.11	74.47
KRH44603	Soybean	cytosol	18.89	73.88
GSMUA_Achr3P27840_001	Banana	plastid	68.13	73.46
KRH46999	Soybean	plastid	66.79	73.22
VIT_11s0052g00020.t01	Wine grape	plastid	67.18	73.18
GSMUA_Achr1P23590_001	Banana	plastid	64.5	73.16
KRH44657	Soybean	plastid	66.6	73.01
KRH09609	Soybean	plastid	65.08	72.09
KRH23708	Soybean	plastid	66.03	71.78
Solyc12g017450.1.1	Tomato	cytosol, plasma membrane, plastid	62.6	69.49
KRH47297	Soybean	cytosol, plasma membrane, plastid	63.93	69.21
PGSC0003DMT400025021	Potato	cytosol, plasma membrane, plastid	62.02	68.86
PGSC0003DMT400025018	Potato	cytosol, mitochondrion, plasma membrane, plastid	62.02	68.86
AT1G78880.1	Thale cress	plastid	60.88	68.16
AT1G16860.1	Thale cress	cytosol, mitochondrion, plastid, vacuole	60.88	67.3
CDX83939	Canola	cytosol, plastid, vacuole	59.92	66.95
CDX96804	Canola	plastid	59.92	66.81
Bra026021.1-P	Field mustard	plastid	59.35	66.74
CDY35123	Canola	plastid	59.35	66.74
KRH44594	Soybean	cytosol, plasma membrane, plastid	44.66	66.67
Bra016629.1-P	Field mustard	plastid	59.73	66.6
CDY40028	Canola	plastid	59.54	66.52
CDX87427	Canola	mitochondrion, plastid, vacuole	58.78	65.81
CDY26883	Canola	mitochondrion, plastid, vacuole	58.97	65.61
CDY14586	Canola	plastid	58.97	65.61
CDX83594	Canola	plastid	58.97	65.61
CDX88486	Canola	mitochondrion, plastid, vacuole	58.59	65.6
Bra008384.1-P	Field mustard	plastid	50.76	63.48
Bra035072.1-P	Field mustard	plasma membrane	58.21	54.86
TraesCS2B01G407700.1	Wheat	golgi, peroxisome, vacuole	23.47	38.44
TraesCS7B01G290800.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	4.96	6.37

Protein Annotations

EnsemblPlants:TraesCS7B01G176900.2	EnsemblPlantsGene:TraesCS7B01G176900	PANTHER:PTHR33709	PANTHER:PTHR33709:SF4	SEG:seg	SignalP:SignalP-noTM
TMHMM:TMhelix	MapMan:21.1.1.3.1	:	:	:	:

Description

No Description!

Coordinates

chr7B:+:251664170..251667503

Molecular Weight (calculated)

56518.0 Da

IEP (calculated)

9.764

GRAVY (calculated)

-0.104

Length

524 amino acids

Sequence
(BLAST)

001: MTTASVCFGC KFLLVRLWGG CVVSPCLRSA DARCLLYLRI QNMGSRFPSH QLSNGLYVSG RPEQPKEKAP VVCSAAMPYT GGDIKKSGEL GKMFDLHAEK
101: SRKSGPLGNQ PSRNTSFGGA ASNSGPVSSA ASRSNYSGSI SAAVPGTGGS ARAKSNSGPL NKHGEPTKRS SGPQSGGVTP MARQNSGHLP PILPTTGLIT
201: SGPISSGQLN SSGALRKVSG TLDSTVSMKM RATSSAYNPA VTNLNEQNSY SIKASLPKPI LWAAILLFAM GFIAGGFILA AVHNSILLVV VVVIFGFVAA
301: LLVWNICWGT RGMTRFVSRY PDADLRIAKD GEYVKVTGVV TCGNFPLESS FQRVPRCVYT SSCLYEYRGW DSKAANTQHR RFTWGLRSIE RHAVDFYISD
401: FQSGLRALVK IGYGARLIPY VDEAVVIDIN PENKDMSPEF LRWLRERNLS SDDRIMRLKE GYIKEGNTVS VIGVVQRNDN VLMIVPPPEP FNTGCQWGKC
501: LLPTSLDGLV LRCEDTSNGD VIPV

Best Arabidopsis Sequence Match ( AT1G16860.1 )
(BLAST)

001: MGSRYPSHQL SNGLFVSGRP EQPKERAPTM SAVAMPYTGG DIKRSGELGK MFDIPADGTK SRKSGPIPGA PSRSGSFAGT AQSGPGAPMA TGRMSGSLAS
101: AGSVSMKKTN SGPLSKHGEP LKKSSGPQSG GVTRQNSGSI PILPATGLIT SGPITSGPLN SSGAPRKVSG PLDSSGLMKS HMPTVVHNQA VTTLGPEDDF
201: SCLKSFPKPV LWLVVLIFIM GFLAGGFILG AVHNPILLVV VAILFTVVAA LFIWNICWGR RGITDFIARY PDADLRTAKN GQHVKVTGVV TCGNVPLESS
301: FHRVPRCVYT STCLYEYRGW GSKPANSSHR HFTWGLRSSE RHVVDFYISD FQSGLRALVK TGSGAKVTPL VDDSVVIDFK QGSEQVSPDF VRWLGKKNLT
401: SDDRIMRLKE GYIKEGSTVS VIGVVQRNDN VLMIVPSSEP LAAGWQWRRC TFPTSLEGIV LRCEDSSNVD AIPV

Arabidopsis Description

Uncharacterized membrane protein At1g16860 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ45]
SUBAcon: [mitochondrion,plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.