Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX87427 | Canola | mitochondrion, plastid, vacuole | 92.95 | 92.95 |
| CDX88486 | Canola | mitochondrion, plastid, vacuole | 92.31 | 92.31 |
| CDX83594 | Canola | plastid | 91.88 | 91.3 |
| CDY14586 | Canola | plastid | 91.88 | 91.3 |
| CDY26883 | Canola | mitochondrion, plastid, vacuole | 91.03 | 90.45 |
| Bra008384.1-P | Field mustard | plastid | 80.13 | 89.5 |
| AT1G16860.1 | Thale cress | cytosol, mitochondrion, plastid, vacuole | 89.1 | 87.97 |
| Bra035072.1-P | Field mustard | plasma membrane | 91.24 | 76.8 |
| KRH46999 | Soybean | plastid | 75.0 | 73.43 |
| KRH44657 | Soybean | plastid | 74.79 | 73.22 |
| KRH09609 | Soybean | plastid | 73.29 | 72.52 |
| PGSC0003DMT400023759 | Potato | cytosol, mitochondrion, plasma membrane, plastid | 73.93 | 72.38 |
| KRH23708 | Soybean | plastid | 73.29 | 71.16 |
| Solyc03g123920.2.1 | Tomato | plastid | 67.31 | 71.11 |
| EES12814 | Sorghum | plastid | 72.65 | 70.69 |
| Zm00001d026258_P001 | Maize | cytosol, plastid, vacuole | 72.65 | 70.54 |
| Os08t0230200-01 | Rice | cytosol, plastid | 72.01 | 69.77 |
| VIT_09s0018g01240.t01 | Wine grape | plastid | 70.51 | 68.32 |
| Zm00001d050191_P003 | Maize | plasma membrane | 69.66 | 68.2 |
| KXG24772 | Sorghum | cytosol, plasma membrane, plastid | 69.44 | 67.99 |
| Os04t0606500-01 | Rice | plasma membrane | 68.38 | 66.39 |
| HORVU7Hr1G061070.1 | Barley | cytosol, plasma membrane, plastid | 67.95 | 65.98 |
| TraesCS2D01G429500.1 | Wheat | cytosol, plasma membrane, plastid | 67.09 | 65.01 |
| Zm00001d024364_P001 | Maize | plasma membrane | 68.59 | 64.85 |
| Zm00001d002391_P005 | Maize | cytosol, plasma membrane, plastid | 72.44 | 64.82 |
| TraesCS2A01G431500.2 | Wheat | cytosol, plasma membrane, plastid | 66.88 | 64.8 |
| TraesCS2B01G453000.2 | Wheat | cytosol, plasma membrane, plastid | 66.88 | 64.8 |
| HORVU2Hr1G100660.2 | Barley | cytosol, plasma membrane, plastid | 66.67 | 64.6 |
| TraesCS7D01G282000.3 | Wheat | mitochondrion | 67.73 | 63.53 |
| TraesCS7A01G283600.2 | Wheat | mitochondrion | 67.73 | 63.53 |
| TraesCS2D01G429600.1 | Wheat | cytosol, nucleus, plastid | 59.19 | 63.39 |
| TraesCS2B01G453100.1 | Wheat | cytosol, nucleus, plastid | 58.97 | 63.16 |
| TraesCS2A01G431600.1 | Wheat | cytosol, nucleus, plastid | 58.97 | 63.16 |
| HORVU2Hr1G100700.2 | Barley | plastid | 57.48 | 61.56 |
| TraesCS7B01G176900.2 | Wheat | plasma membrane | 68.16 | 60.88 |
| AT4G22290.1 | Thale cress | cytosol, plasma membrane, plastid | 47.65 | 50.11 |
| GSMUA_Achr3P28220_001 | Banana | mitochondrion | 8.97 | 9.17 |
| GSMUA_Achr4P20140_001 | Banana | mitochondrion, plasma membrane, plastid | 7.91 | 8.94 |
Protein Annotations
| MapMan:21.1.1.3.1 | EntrezGene:844225 | UniProt:A0A178WI32 | ProteinID:AAC83023.1 | ProteinID:AEE36167.1 | ArrayExpress:AT1G78880 |
| EnsemblPlantsGene:AT1G78880 | RefSeq:AT1G78880 | TAIR:AT1G78880 | RefSeq:AT1G78880-TAIR-G | EnsemblPlants:AT1G78880.1 | TAIR:AT1G78880.1 |
| EMBL:AY072176 | EMBL:AY096686 | EMBL:AY120734 | Unigene:At.21193 | EMBL:BT000364 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006508 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008233 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019538 |
| RefSeq:NP_178009.1 | ProteinID:OAP18039.1 | PO:PO:0000005 | PO:PO:0000293 | PANTHER:PTHR33709 | PANTHER:PTHR33709:SF9 |
| UniProt:Q9ZVA7 | TMHMM:TMhelix | UniParc:UPI00000AC69F | SEG:seg | : | : |
Description
F9K20.7 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZVA7]
Coordinates
chr1:-:29652633..29655949
Molecular Weight (calculated)
50107.2 Da
IEP (calculated)
10.004
GRAVY (calculated)
-0.163
Length
468 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSRYASHQL SNGLFVSGRP EQPKEKPPTM SSVAMPYTGG DIKKSGELGK MFDIPTDGTK SRKSGPITGG SSRSGAQSGP VPNATGRMSG NLASAGSNSM
101: KKTNSGPLSK HGEPLKKSSG PQSGGVTRQN SGPIPILPTT GLITSGPITS GPLNSSGAPR KISGPLDYSG SMKTHMPSVV HNQAVTTLAP EDDFSCMKSF
201: PKPVLWLVIL IFVMGFLAGG FILGAVHNAI LLIVVAVLFT VVAALFIWNI SCERRGITDF IARYPDADLR TAKNGQYVKV TGVVTCGNVP LESSFHRVPR
301: CVYTSTCLYE YRGWGSKPAN ASHRRFTWGL RSAERHVVDF YISDFQSGLR ALVKTGNGAK VTPLVDDSVV IDFKPGNEQA SPDFVRWLGK KNLTNDDRIM
401: RLKEGYIKEG STVSVIGVVQ RNDNVLMIVP TTEPLAAGWQ WSKCTFPASL EGIVLRCEDS SNVDAIPV
101: KKTNSGPLSK HGEPLKKSSG PQSGGVTRQN SGPIPILPTT GLITSGPITS GPLNSSGAPR KISGPLDYSG SMKTHMPSVV HNQAVTTLAP EDDFSCMKSF
201: PKPVLWLVIL IFVMGFLAGG FILGAVHNAI LLIVVAVLFT VVAALFIWNI SCERRGITDF IARYPDADLR TAKNGQYVKV TGVVTCGNVP LESSFHRVPR
301: CVYTSTCLYE YRGWGSKPAN ASHRRFTWGL RSAERHVVDF YISDFQSGLR ALVKTGNGAK VTPLVDDSVV IDFKPGNEQA SPDFVRWLGK KNLTNDDRIM
401: RLKEGYIKEG STVSVIGVVQ RNDNVLMIVP TTEPLAAGWQ WSKCTFPASL EGIVLRCEDS SNVDAIPV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.