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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • mitochondrion 1
  • vacuole 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:vacuole
YLoc:plastid
 plasma membrane: 27341663
msms PMID: 27341663 doi
P Voothuluru, JC Anderson, RE Sharp, SC Peck
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG24772 Sorghum cytosol, plasma membrane, plastid 94.35 94.35
Zm00001d024364_P001 Maize plasma membrane 93.1 89.9
Os08t0230200-01 Rice cytosol, plastid 88.08 87.16
Zm00001d026258_P001 Maize cytosol, plastid, vacuole 85.77 85.06
HORVU7Hr1G061070.1 Barley cytosol, plasma membrane, plastid 83.89 83.19
TraesCS7A01G283600.2 Wheat mitochondrion 83.68 80.16
TraesCS7D01G282000.3 Wheat mitochondrion 83.68 80.16
Zm00001d002391_P005 Maize cytosol, plasma membrane, plastid 85.77 78.39
KRH44603 Soybean cytosol 21.76 77.61
TraesCS7B01G176900.2 Wheat plasma membrane 84.1 76.72
GSMUA_Achr9P22990_001 Banana plastid 77.2 75.93
GSMUA_Achr7P04950_001 Banana cytosol, plasma membrane, plastid 67.78 75.0
GSMUA_Achr1P10460_001 Banana plastid 65.48 74.0
GSMUA_AchrUn_... Banana plastid 70.08 73.46
VIT_11s0052g00020.t01 Wine grape plastid 73.43 72.97
GSMUA_Achr3P27840_001 Banana plastid 74.06 72.84
KRH46999 Soybean plastid 72.8 72.8
GSMUA_Achr1P23590_001 Banana plastid 70.29 72.73
KRH44657 Soybean plastid 72.38 72.38
KRH09609 Soybean plastid 71.34 72.09
KRH23708 Soybean plastid 71.97 71.37
AT1G78880.1 Thale cress plastid 68.2 69.66
KRH47297 Soybean cytosol, plasma membrane, plastid 70.5 69.63
Solyc12g017450.1.1 Tomato cytosol, plasma membrane, plastid 67.99 68.86
PGSC0003DMT400025021 Potato cytosol, plasma membrane, plastid 67.78 68.64
PGSC0003DMT400025018 Potato cytosol, mitochondrion, plasma membrane, plastid 67.36 68.22
CDX96804 Canola plastid 66.95 68.09
CDX83939 Canola cytosol, plastid, vacuole 66.74 68.02
Bra016629.1-P Field mustard plastid 66.74 67.87
AT1G16860.1 Thale cress cytosol, mitochondrion, plastid, vacuole 67.15 67.72
CDX87427 Canola mitochondrion, plastid, vacuole 66.11 67.52
Bra026021.1-P Field mustard plastid 65.69 67.38
CDX88486 Canola mitochondrion, plastid, vacuole 65.9 67.31
CDY14586 Canola plastid 66.32 67.3
CDX83594 Canola plastid 66.32 67.3
CDY35123 Canola plastid 65.48 67.17
CDY40028 Canola plastid 65.69 66.95
CDY26883 Canola mitochondrion, plastid, vacuole 65.9 66.88
KRH44594 Soybean cytosol, plasma membrane, plastid 48.54 66.1
Bra008384.1-P Field mustard plastid 56.28 64.2
Bra035072.1-P Field mustard plasma membrane 64.85 55.76
Zm00001d025966_P001 Maize golgi, peroxisome, plasma membrane 24.48 36.56
Zm00001d046644_P001 Maize nucleus, plasma membrane, plastid 5.02 6.76
Protein Annotations
EntrezGene:100274397MapMan:21.1.1.3.1ProteinID:AQK52084.1ProteinID:AQK52085.1ProteinID:AQK52088.1UniProt:B4G0P6
EMBL:BT042934EMBL:BT064523GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006508
GO:GO:0008150GO:GO:0008152GO:GO:0008233GO:GO:0016020GO:GO:0016021GO:GO:0016787
GO:GO:0019538PANTHER:PTHR33709PANTHER:PTHR33709:SF4TMHMM:TMhelixUniParc:UPI00017B758CEnsemblPlantsGene:Zm00001d050191
EnsemblPlants:Zm00001d050191_P003EnsemblPlants:Zm00001d050191_T003SEG:seg:::
Description
Ubiquitin-specific protease family C19-related protein
Coordinates
chr4:+:72039502..72044085
Molecular Weight (calculated)
51127.2 Da
IEP (calculated)
9.767
GRAVY (calculated)
-0.157
Length
478 amino acids
Sequence
(BLAST)
001: MGSRFPSHQL SNGLYVSGRP EQPKEKSPVI CSSAMPYTGG DIKKSGELGK MFDLHRKSGP LGNQTSRNTS FGGAASNSGP VSNAVGRSNY SGSISSAIPN
101: TGGSSRTKTN SGPLNKHGEP TKRSSGPQSG GVTPMARQNS GPLPPVLPTT GLITSGPITS GQLNSSGAQR KVSGPLDSSV SMKMRTTSFA HNPAVTNLNV
201: GDGYSIKGSI PTTIIWLVAL LFLVGFVAGG FILAAIHNPI LLIVVVVIFG FVAALVTWNI CWGTRGVIDF IGRYSDVDLR TAKDGEYVKV TGVVTCGNLP
301: LESSFQRVPR CVYTSTCLYE YRGWDSKAAN ATHRRFTWGL RSMERHAVDF YISDFQSGLR ALVRAGSGAR VTPYVDESVA IDVNPDNKDM SPEFLRWLRG
401: RNLSSDDRTM RLKEGYIKEG STVSVMGVVQ RNENVLMIVP PAEPISTGCQ WGKCVLPTSL EGLVLRCEDT SGLDVIPV
Best Arabidopsis Sequence Match ( AT4G20935.1 )
(BLAST)
1: VFDLVSVHTL QDLPFYKVLV VRHCRTDPQR FPSVSSVTQS TTLLSLIQNP IYLGFHEFSA LVSWKSCWDS SKTVAFWGKR FEVKEG
Arabidopsis Description
Uncharacterized protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A1P8B7P2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.