Factsheet for Bra026021.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
cytosol 1
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35123	Canola	plastid	99.57	99.57
Bra016629.1-P	Field mustard	plastid	89.27	88.51
AT1G16860.1	Thale cress	cytosol, mitochondrion, plastid, vacuole	88.2	86.71
Bra008384.1-P	Field mustard	plastid	71.46	79.47
KRH46999	Soybean	plastid	73.82	71.97
KRH44657	Soybean	plastid	73.18	71.34
KRH09609	Soybean	plastid	71.89	70.82
PGSC0003DMT400023759	Potato	cytosol, mitochondrion, plasma membrane, plastid	72.1	70.29
KRH23708	Soybean	plastid	71.89	69.5
Solyc03g123920.2.1	Tomato	plastid	65.02	68.4
Bra035072.1-P	Field mustard	plasma membrane	81.55	68.35
EES12814	Sorghum	plastid	70.39	68.19
Os08t0230200-01	Rice	cytosol, plastid	70.6	68.12
Zm00001d026258_P001	Maize	cytosol, plastid, vacuole	70.39	68.05
VIT_09s0018g01240.t01	Wine grape	plastid	69.74	67.29
Zm00001d050191_P003	Maize	plasma membrane	67.38	65.69
KXG24772	Sorghum	cytosol, plasma membrane, plastid	66.95	65.27
HORVU7Hr1G061070.1	Barley	cytosol, plasma membrane, plastid	66.74	64.52
Os04t0606500-01	Rice	plasma membrane	66.74	64.52
Zm00001d024364_P001	Maize	plasma membrane	67.6	63.64
TraesCS2A01G431500.2	Wheat	cytosol, plasma membrane, plastid	64.81	62.53
TraesCS2D01G429500.1	Wheat	cytosol, plasma membrane, plastid	64.81	62.53
Zm00001d002391_P005	Maize	cytosol, plasma membrane, plastid	69.96	62.33
HORVU2Hr1G100660.2	Barley	cytosol, plasma membrane, plastid	64.38	62.11
TraesCS2B01G453000.2	Wheat	cytosol, plasma membrane, plastid	64.38	62.11
TraesCS7A01G283600.2	Wheat	mitochondrion	66.31	61.92
TraesCS7D01G282000.3	Wheat	mitochondrion	66.31	61.92
TraesCS2D01G429600.1	Wheat	cytosol, nucleus, plastid	57.94	61.78
TraesCS2A01G431600.1	Wheat	cytosol, nucleus, plastid	57.51	61.33
TraesCS2B01G453100.1	Wheat	cytosol, nucleus, plastid	57.51	61.33
HORVU2Hr1G100700.2	Barley	plastid	56.87	60.64
TraesCS7B01G176900.2	Wheat	plasma membrane	66.74	59.35
Bra019387.1-P	Field mustard	cytosol, plasma membrane, plastid	47.42	50.0
Bra013607.1-P	Field mustard	cytosol, plasma membrane, plastid	47.0	49.44
Bra029474.1-P	Field mustard	cytosol, plasma membrane, plastid	40.99	47.99
GSMUA_Achr3P28220_001	Banana	mitochondrion	9.01	9.17
GSMUA_Achr4P20140_001	Banana	mitochondrion, plasma membrane, plastid	7.94	8.94

Protein Annotations

EnsemblPlants:Bra026021.1	EnsemblPlants:Bra026021.1-P	EnsemblPlantsGene:Bra026021	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR33709	PANTHER:PTHR33709:SF9	SEG:seg	TMHMM:TMhelix	UniParc:UPI000253F279	UniProt:M4EB62
MapMan:21.1.1.3.1	:	:	:	:	:

Description

AT1G16860 (E=2e-225) | merozoite surface protein-related

Coordinates

chrA06:+:6471902..6473545

Molecular Weight (calculated)

50020.2 Da

IEP (calculated)

10.214

GRAVY (calculated)

-0.165

Length

466 amino acids

Sequence
(BLAST)

001: MGSRYPSHQL GNGLFVSGRP EQPKERPPTM SSVAMPYTGG DIKKSGELGK MFEIPTDGSK SRKSGPIPGA PSRSGSFAQS GQGAPNASTT RMSGSLASAA
101: GSLSMKKTNS GPLSKHGEPL KKSSGPQSRQ NSGPIPVVLP ATGLITSGPL NSSGAPRKVS GPLDSSGSLK THMPSAVVHN PAVTTLGPPD DFSSLKSFPK
201: PVLWLIVLIF IMGFLAGGFI LGAVHNPMLL IVVAIFFAVV ATLFIWNVCW GRRGVVDFVA RYPDADLRTA KNGQYVKVTG VVTCGNVPLE SSYQRVPRCV
301: YTSTCLYEYR GWGSKPANSS HRLFTWGLRS SERHVVDFYI SDFQSGLRAL VKTGNGAKVT PLVDDSAVVD FKHGNEQMSP DFVHWLKKKN LSSDDRIMRL
401: KEGYIKEGST VSVIGVVQRN DNVLMIVPPS EPLAAGWQWR RCTFPTTLEG VVLRCEDSSN VDAIPV

Best Arabidopsis Sequence Match ( AT1G16860.1 )
(BLAST)

001: MGSRYPSHQL SNGLFVSGRP EQPKERAPTM SAVAMPYTGG DIKRSGELGK MFDIPADGTK SRKSGPIPGA PSRSGSFAGT AQSGPGAPMA TGRMSGSLAS
101: AGSVSMKKTN SGPLSKHGEP LKKSSGPQSG GVTRQNSGSI PILPATGLIT SGPITSGPLN SSGAPRKVSG PLDSSGLMKS HMPTVVHNQA VTTLGPEDDF
201: SCLKSFPKPV LWLVVLIFIM GFLAGGFILG AVHNPILLVV VAILFTVVAA LFIWNICWGR RGITDFIARY PDADLRTAKN GQHVKVTGVV TCGNVPLESS
301: FHRVPRCVYT STCLYEYRGW GSKPANSSHR HFTWGLRSSE RHVVDFYISD FQSGLRALVK TGSGAKVTPL VDDSVVIDFK QGSEQVSPDF VRWLGKKNLT
401: SDDRIMRLKE GYIKEGSTVS VIGVVQRNDN VLMIVPSSEP LAAGWQWRRC TFPTSLEGIV LRCEDSSNVD AIPV

Arabidopsis Description

Uncharacterized membrane protein At1g16860 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ45]
SUBAcon: [mitochondrion,plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.