CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
cytosol 1
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH09609	Soybean	plastid	95.23	97.04
KRH46999	Soybean	plastid	90.87	91.63
KRH44657	Soybean	plastid	90.46	91.21
KRH44603	Soybean	cytosol	23.24	83.58
VIT_09s0018g01240.t01	Wine grape	plastid	79.88	79.71
PGSC0003DMT400023759	Potato	cytosol, mitochondrion, plasma membrane, plastid	78.84	79.5
KRH47297	Soybean	cytosol, plasma membrane, plastid	79.67	79.34
KRH44594	Soybean	cytosol, plasma membrane, plastid	56.64	77.78
Solyc03g123920.2.1	Tomato	plastid	70.33	76.52
Os08t0230200-01	Rice	cytosol, plastid	75.73	75.57
Zm00001d026258_P001	Maize	cytosol, plastid, vacuole	75.31	75.31
EES12814	Sorghum	plastid	74.9	75.05
CDX96804	Canola	plastid	71.99	73.83
Bra016629.1-P	Field mustard	plastid	71.58	73.4
AT1G78880.1	Thale cress	plastid	71.16	73.29
CDX83939	Canola	cytosol, plastid, vacuole	71.16	73.13
KXG24772	Sorghum	cytosol, plasma membrane, plastid	72.41	73.01
AT1G16860.1	Thale cress	cytosol, mitochondrion, plastid, vacuole	70.95	72.15
CDY35123	Canola	plastid	69.71	72.1
Zm00001d050191_P003	Maize	plasma membrane	71.37	71.97
Bra026021.1-P	Field mustard	plastid	69.5	71.89
CDY40028	Canola	plastid	69.71	71.64
CDX87427	Canola	mitochondrion, plastid, vacuole	69.5	71.58
HORVU7Hr1G061070.1	Barley	cytosol, plasma membrane, plastid	71.37	71.37
CDX88486	Canola	mitochondrion, plastid, vacuole	69.29	71.37
Os04t0606500-01	Rice	plasma membrane	70.95	70.95
CDY14586	Canola	plastid	69.09	70.7
CDX83594	Canola	plastid	68.88	70.49
CDY26883	Canola	mitochondrion, plastid, vacuole	68.05	69.64
Zm00001d024364_P001	Maize	plasma membrane	70.95	69.09
Zm00001d002391_P005	Maize	cytosol, plasma membrane, plastid	74.9	69.02
TraesCS7A01G283600.2	Wheat	mitochondrion	71.37	68.94
TraesCS7D01G282000.3	Wheat	mitochondrion	71.37	68.94
TraesCS2D01G429500.1	Wheat	cytosol, plasma membrane, plastid	68.88	68.74
HORVU2Hr1G100660.2	Barley	cytosol, plasma membrane, plastid	68.67	68.53
TraesCS2A01G431500.2	Wheat	cytosol, plasma membrane, plastid	68.67	68.53
TraesCS2B01G453000.2	Wheat	cytosol, plasma membrane, plastid	68.67	68.53
TraesCS2B01G453100.1	Wheat	cytosol, nucleus, plastid	61.83	68.19
TraesCS2D01G429600.1	Wheat	cytosol, nucleus, plastid	61.83	68.19
Bra008384.1-P	Field mustard	plastid	59.13	68.02
TraesCS2A01G431600.1	Wheat	cytosol, nucleus, plastid	61.62	67.96
HORVU2Hr1G100700.2	Barley	plastid	60.37	66.59
TraesCS7B01G176900.2	Wheat	plasma membrane	71.78	66.03
Bra035072.1-P	Field mustard	plasma membrane	68.26	59.17
KRH11512	Soybean	plastid	47.51	54.92
KRH36527	Soybean	plastid	46.68	53.57
GSMUA_Achr3P28220_001	Banana	mitochondrion	9.54	10.04
GSMUA_Achr4P20140_001	Banana	mitochondrion, plasma membrane, plastid	8.3	9.66

Protein Annotations

EMBL:ACUP02008482	EnsemblPlants:KRH23708	EnsemblPlantsGene:GLYMA_13G372500	EntrezGene:100807593	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	PANTHER:PTHR33709	PANTHER:PTHR33709:SF4	ProteinID:KRH23707.1	ProteinID:KRH23708	ProteinID:KRH23708.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI000233B975	UniProt:K7M431	MapMan:21.1.1.3.1	:

Description

hypothetical protein

Coordinates

chr13:+:45765109..45769028

Molecular Weight (calculated)

52022.6 Da

IEP (calculated)

10.062

GRAVY (calculated)

-0.159

Length

482 amino acids

Sequence
(BLAST)

001: MGSRFPSHQL SNGLYVSGRP EQPKERTPTM SSVAMPYTGG DIKKSGELGK MFDIPMAMDA SKSRKSGQLN NAPSRTGSFA GAAASHSGPI LPNSTPRSIY
101: TTSGNISSGG SMTTASVSMK KTNSGPLNKH GEPVKKSSGP QSGGVTRQNS GPIPPVLPTT GLITSGPLNS SGAPRKVSGP LEFTGSMKSP SSVTHNPAMT
201: TLSLDDEYSF RRNFPKPILW SVILIFIMGF IAGAFILGAV HNVILLVVVV VLFGAVAALF TWNSCCGRTA IVGFISRYPD AELRTAKNGQ FVKVSGVVTC
301: GNVPLESSFQ KVPRCVYTST SLFEYRGWDS KAANPKHRRF TWGLRAAERH VVDFYISDFQ SGLRALVKTG YGARVTPYVD DSIVIDVNPD NKDMSPEFLR
401: WLRERNLSSD DRLMRLKEGY IKEGSTVSVM GVVQRNDNVL MIVPPPEPLT TGCQWAKCIF PASLEGIILR CEDTSKIDVI PV

Best Arabidopsis Sequence Match ( AT1G16860.1 )
(BLAST)

001: MGSRYPSHQL SNGLFVSGRP EQPKERAPTM SAVAMPYTGG DIKRSGELGK MFDIPADGTK SRKSGPIPGA PSRSGSFAGT AQSGPGAPMA TGRMSGSLAS
101: AGSVSMKKTN SGPLSKHGEP LKKSSGPQSG GVTRQNSGSI PILPATGLIT SGPITSGPLN SSGAPRKVSG PLDSSGLMKS HMPTVVHNQA VTTLGPEDDF
201: SCLKSFPKPV LWLVVLIFIM GFLAGGFILG AVHNPILLVV VAILFTVVAA LFIWNICWGR RGITDFIARY PDADLRTAKN GQHVKVTGVV TCGNVPLESS
301: FHRVPRCVYT STCLYEYRGW GSKPANSSHR HFTWGLRSSE RHVVDFYISD FQSGLRALVK TGSGAKVTPL VDDSVVIDFK QGSEQVSPDF VRWLGKKNLT
401: SDDRIMRLKE GYIKEGSTVS VIGVVQRNDN VLMIVPSSEP LAAGWQWRRC TFPTSLEGIV LRCEDSSNVD AIPV

Arabidopsis Description

Uncharacterized membrane protein At1g16860 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ45]
SUBAcon: [mitochondrion,plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.