Factsheet for Bra016629.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
cytosol 1
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96804	Canola	plastid	99.36	99.36
AT1G16860.1	Thale cress	cytosol, mitochondrion, plastid, vacuole	90.43	89.66
Bra026021.1-P	Field mustard	plastid	88.51	89.27
Bra008384.1-P	Field mustard	plastid	71.91	80.67
KRH44657	Soybean	plastid	74.26	73.01
KRH46999	Soybean	plastid	74.26	73.01
PGSC0003DMT400023759	Potato	cytosol, mitochondrion, plasma membrane, plastid	73.83	72.59
KRH09609	Soybean	plastid	72.77	72.3
KRH23708	Soybean	plastid	73.4	71.58
Solyc03g123920.2.1	Tomato	plastid	66.17	70.2
EES12814	Sorghum	plastid	71.7	70.06
Os08t0230200-01	Rice	cytosol, plastid	71.7	69.77
Zm00001d026258_P001	Maize	cytosol, plastid, vacuole	71.49	69.71
Bra035072.1-P	Field mustard	plasma membrane	82.13	69.42
VIT_09s0018g01240.t01	Wine grape	plastid	70.0	68.12
KXG24772	Sorghum	cytosol, plasma membrane, plastid	67.87	66.74
Zm00001d050191_P003	Maize	plasma membrane	67.87	66.74
Os04t0606500-01	Rice	plasma membrane	67.45	65.77
HORVU7Hr1G061070.1	Barley	cytosol, plasma membrane, plastid	66.6	64.94
Zm00001d024364_P001	Maize	plasma membrane	67.66	64.24
Zm00001d002391_P005	Maize	cytosol, plasma membrane, plastid	71.28	64.05
TraesCS2A01G431500.2	Wheat	cytosol, plasma membrane, plastid	65.74	63.98
TraesCS2D01G429500.1	Wheat	cytosol, plasma membrane, plastid	65.74	63.98
TraesCS2B01G453000.2	Wheat	cytosol, plasma membrane, plastid	65.53	63.77
HORVU2Hr1G100660.2	Barley	cytosol, plasma membrane, plastid	65.32	63.56
TraesCS2D01G429600.1	Wheat	cytosol, nucleus, plastid	58.72	63.16
TraesCS2A01G431600.1	Wheat	cytosol, nucleus, plastid	58.09	62.47
TraesCS2B01G453100.1	Wheat	cytosol, nucleus, plastid	58.09	62.47
TraesCS7A01G283600.2	Wheat	mitochondrion	66.17	62.32
TraesCS7D01G282000.3	Wheat	mitochondrion	66.17	62.32
HORVU2Hr1G100700.2	Barley	plastid	56.6	60.87
TraesCS7B01G176900.2	Wheat	plasma membrane	66.6	59.73
Bra019387.1-P	Field mustard	cytosol, plasma membrane, plastid	47.23	50.23
Bra013607.1-P	Field mustard	cytosol, plasma membrane, plastid	47.02	49.89
Bra029474.1-P	Field mustard	cytosol, plasma membrane, plastid	41.91	49.5
GSMUA_Achr3P28220_001	Banana	mitochondrion	9.15	9.39
GSMUA_Achr4P20140_001	Banana	mitochondrion, plasma membrane, plastid	7.87	8.94

Protein Annotations

EnsemblPlants:Bra016629.1	EnsemblPlants:Bra016629.1-P	EnsemblPlantsGene:Bra016629	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR33709	PANTHER:PTHR33709:SF9	SEG:seg	TMHMM:TMhelix	UniParc:UPI00025456D7	UniProt:M4DJF1
MapMan:21.1.1.3.1	:	:	:	:	:

Description

AT1G16860 (E=6e-231) | merozoite surface protein-related

Coordinates

chrA08:-:19340129..19341802

Molecular Weight (calculated)

50148.0 Da

IEP (calculated)

10.264

GRAVY (calculated)

-0.169

Length

470 amino acids

Sequence
(BLAST)

001: MGSRYPSHQL GNGLFVSGRP EQPKERPPTM SSTAMPYTGG DIKKSGELGK MFIPTDGSKS RKSGPIPGAP SRSGSFAGTA QSGPGAANAT GRMSGSLASS
101: GGGSVSMKKT NSGPLSKHGE PLKKSSGPQS GGVTRQHSGP IPVLPATGLI TSGPLNSSGA PRKVSGPLDS SGSLKTHMAS VVHNQAVTTL GPEDEFSSLK
201: SFPKSVLWLV VLIFIMGFLA GGFILGAVHN PMLLIVVAVF FTVVAALFIW NSFWGRRGIT DFIARYPDAD LRTAKNGQFV KVTGVVTCGN VPLESSFQRV
301: PRCVYTSTCL YEYRGWGSKP ANSSHRCFTW GLRSSERHVV DFYISDFQSG LRALVKTGNG AKVTPLVDDS VVIDYKHGSE KASPDFVRWL RQKNLSSDDR
401: IMRLKEGYIK EGSTVSVIGV VQRNDNVLMI VPSSEPITAG WQWSRCTFPT SLEGIVLRCE DSSNVDAIPV

Best Arabidopsis Sequence Match ( AT1G16860.1 )
(BLAST)

001: MGSRYPSHQL SNGLFVSGRP EQPKERAPTM SAVAMPYTGG DIKRSGELGK MFDIPADGTK SRKSGPIPGA PSRSGSFAGT AQSGPGAPMA TGRMSGSLAS
101: AGSVSMKKTN SGPLSKHGEP LKKSSGPQSG GVTRQNSGSI PILPATGLIT SGPITSGPLN SSGAPRKVSG PLDSSGLMKS HMPTVVHNQA VTTLGPEDDF
201: SCLKSFPKPV LWLVVLIFIM GFLAGGFILG AVHNPILLVV VAILFTVVAA LFIWNICWGR RGITDFIARY PDADLRTAKN GQHVKVTGVV TCGNVPLESS
301: FHRVPRCVYT STCLYEYRGW GSKPANSSHR HFTWGLRSSE RHVVDFYISD FQSGLRALVK TGSGAKVTPL VDDSVVIDFK QGSEQVSPDF VRWLGKKNLT
401: SDDRIMRLKE GYIKEGSTVS VIGVVQRNDN VLMIVPSSEP LAAGWQWRRC TFPTSLEGIV LRCEDSSNVD AIPV

Arabidopsis Description

Uncharacterized membrane protein At1g16860 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ45]
SUBAcon: [mitochondrion,plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.