CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d026258_P001	Maize	cytosol, plastid, vacuole	98.75	98.55
Zm00001d002391_P005	Maize	cytosol, plasma membrane, plastid	97.71	89.87
Os04t0606500-01	Rice	plasma membrane	87.32	87.14
KXG24772	Sorghum	cytosol, plasma membrane, plastid	85.65	86.19
GSMUA_Achr9P22990_001	Banana	plastid	84.62	83.74
TraesCS2D01G429600.1	Wheat	cytosol, nucleus, plastid	75.47	83.07
TraesCS2B01G453100.1	Wheat	cytosol, nucleus, plastid	74.43	81.92
TraesCS2A01G431600.1	Wheat	cytosol, nucleus, plastid	74.43	81.92
TraesCS2B01G453000.2	Wheat	cytosol, plasma membrane, plastid	82.12	81.78
HORVU2Hr1G100660.2	Barley	cytosol, plasma membrane, plastid	82.12	81.78
TraesCS2D01G429500.1	Wheat	cytosol, plasma membrane, plastid	81.91	81.57
TraesCS2A01G431500.2	Wheat	cytosol, plasma membrane, plastid	81.7	81.37
GSMUA_Achr1P10460_001	Banana	plastid	70.48	80.14
GSMUA_Achr7P04950_001	Banana	cytosol, plasma membrane, plastid	71.93	80.09
GSMUA_AchrUn_...	Banana	plastid	75.68	79.82
HORVU2Hr1G100700.2	Barley	plastid	72.35	79.63
GSMUA_Achr3P27840_001	Banana	plastid	79.0	78.19
VIT_11s0052g00020.t01	Wine grape	plastid	77.75	77.75
KRH46999	Soybean	plastid	76.51	76.99
KRH44603	Soybean	cytosol	21.41	76.87
KRH44657	Soybean	plastid	76.09	76.57
GSMUA_Achr1P23590_001	Banana	plastid	73.39	76.41
KRH09609	Soybean	plastid	74.84	76.11
KRH23708	Soybean	plastid	75.05	74.9
KRH47297	Soybean	cytosol, plasma membrane, plastid	74.64	74.17
AT1G78880.1	Thale cress	plastid	70.69	72.65
KRH44594	Soybean	cytosol, plasma membrane, plastid	52.81	72.36
CDX96804	Canola	plastid	70.27	71.91
Solyc12g017450.1.1	Tomato	cytosol, plasma membrane, plastid	70.48	71.82
PGSC0003DMT400025018	Potato	cytosol, mitochondrion, plasma membrane, plastid	70.48	71.82
PGSC0003DMT400025021	Potato	cytosol, plasma membrane, plastid	70.48	71.82
Bra016629.1-P	Field mustard	plastid	70.06	71.7
CDX83939	Canola	cytosol, plastid, vacuole	69.44	71.22
CDY35123	Canola	plastid	68.4	70.6
CDX87427	Canola	mitochondrion, plastid, vacuole	68.61	70.51
AT1G16860.1	Thale cress	cytosol, mitochondrion, plastid, vacuole	69.44	70.46
Bra026021.1-P	Field mustard	plastid	68.19	70.39
CDX88486	Canola	mitochondrion, plastid, vacuole	68.4	70.3
CDX83594	Canola	plastid	68.61	70.06
CDY14586	Canola	plastid	68.61	70.06
CDY40028	Canola	plastid	68.19	69.94
CDY26883	Canola	mitochondrion, plastid, vacuole	67.98	69.43
Bra008384.1-P	Field mustard	plastid	59.04	67.78
Bra035072.1-P	Field mustard	plasma membrane	67.57	58.45
EES11199	Sorghum	cytosol, endoplasmic reticulum, golgi	26.4	38.37
KXG20435	Sorghum	nucleus, plasma membrane, plastid	5.61	6.62

Protein Annotations

EnsemblPlants:EES12814	EnsemblPlantsGene:SORBI_3006G207400	EntrezGene:8072303	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR33709	PANTHER:PTHR33709:SF4	ProteinID:EES12814	ProteinID:EES12814.1	RefSeq:XP_002448486.1	SEG:seg
TMHMM:TMhelix	unigene:Sbi.16175	UniParc:UPI0001A87535	UniProt:C5YFJ4	MapMan:21.1.1.3.1	:

Description

hypothetical protein

Coordinates

chr6:-:55712542..55717195

Molecular Weight (calculated)

51556.5 Da

IEP (calculated)

9.808

GRAVY (calculated)

-0.222

Length

481 amino acids

Sequence
(BLAST)

001: MASRLSHQLS NGLYVSGRPE QPKEKAPTIC STAMPYTGGD IKKSGELGKM FDLHVEKSRK SGPLGNAPSR NTSFGGAASN SGPVSNAGGR SNYSGSLSSS
101: VPGAGGSARA KSNSGPLNKH GEPTKRSSGP QSGGVTPMAR QNSGPLPPVL PTTGLITSGP ISSGPLNSSG APRKVSGPLD SAASMKMRAT SFAHNQAVTN
201: LNTEDGYSIQ GSFPKPILWA VILLFVMGFI AGGFILGAVH NAILLIVVVV IFGFVAALLI WNACWGRRGA IGFVNRYPDA DLRTAKDGQY VKVTGVVTCG
301: NFPLESSFQR VPRCVYTSTS LYEYRGWDSK AANTEHRRFT WGLRSMERHA VDFYISDFQS GLRALVKTGY GARVTPYVDE SVIIDINPDN KDMSPDFLRW
401: LRERNLSSDD RTMRLKEGYI KEGSTVSVMG VVQRNDNVLM IVPPSEPIST GCQWTKCVLP TNLDGLVLRC EDTSNIDVIP V

Best Arabidopsis Sequence Match ( AT1G78880.1 )
(BLAST)

001: MGSRYASHQL SNGLFVSGRP EQPKEKPPTM SSVAMPYTGG DIKKSGELGK MFDIPTDGTK SRKSGPITGG SSRSGAQSGP VPNATGRMSG NLASAGSNSM
101: KKTNSGPLSK HGEPLKKSSG PQSGGVTRQN SGPIPILPTT GLITSGPITS GPLNSSGAPR KISGPLDYSG SMKTHMPSVV HNQAVTTLAP EDDFSCMKSF
201: PKPVLWLVIL IFVMGFLAGG FILGAVHNAI LLIVVAVLFT VVAALFIWNI SCERRGITDF IARYPDADLR TAKNGQYVKV TGVVTCGNVP LESSFHRVPR
301: CVYTSTCLYE YRGWGSKPAN ASHRRFTWGL RSAERHVVDF YISDFQSGLR ALVKTGNGAK VTPLVDDSVV IDFKPGNEQA SPDFVRWLGK KNLTNDDRIM
401: RLKEGYIKEG STVSVIGVVQ RNDNVLMIVP TTEPLAAGWQ WSKCTFPASL EGIVLRCEDS SNVDAIPV

Arabidopsis Description

F9K20.7 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZVA7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.