Factsheet for TraesCS2D01G429500.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, plastid
Any Predictor:	cytosol, plasma membrane, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G431500.2	Wheat	cytosol, plasma membrane, plastid	99.79	99.79
TraesCS2B01G453000.2	Wheat	cytosol, plasma membrane, plastid	98.96	98.96
HORVU2Hr1G100660.2	Barley	cytosol, plasma membrane, plastid	98.96	98.96
TraesCS2D01G429600.1	Wheat	cytosol, nucleus, plastid	79.71	88.1
EES12814	Sorghum	plastid	81.57	81.91
Zm00001d026258_P001	Maize	cytosol, plastid, vacuole	81.57	81.74
Os04t0606500-01	Rice	plasma membrane	77.85	78.01
KRH44603	Soybean	cytosol	20.91	75.37
Zm00001d002391_P005	Maize	cytosol, plasma membrane, plastid	81.16	74.95
GSMUA_Achr9P22990_001	Banana	plastid	74.12	73.66
TraesCS7D01G282000.3	Wheat	mitochondrion	75.78	73.35
GSMUA_AchrUn_...	Banana	plastid	67.91	71.93
GSMUA_Achr7P04950_001	Banana	cytosol, plasma membrane, plastid	63.56	71.06
KRH46999	Soybean	plastid	69.98	70.71
GSMUA_Achr1P10460_001	Banana	plastid	61.7	70.45
KRH44657	Soybean	plastid	69.57	70.29
KRH09609	Soybean	plastid	68.32	69.77
GSMUA_Achr3P27840_001	Banana	plastid	69.98	69.55
VIT_11s0052g00020.t01	Wine grape	plastid	68.94	69.23
KRH23708	Soybean	plastid	68.74	68.88
GSMUA_Achr1P23590_001	Banana	plastid	65.42	68.4
KRH47297	Soybean	cytosol, plasma membrane, plastid	68.53	68.39
AT1G78880.1	Thale cress	plastid	65.01	67.09
CDX83594	Canola	plastid	65.42	67.09
CDY14586	Canola	plastid	65.22	66.88
CDX87427	Canola	mitochondrion, plastid, vacuole	64.6	66.67
CDX88486	Canola	mitochondrion, plastid, vacuole	64.39	66.45
CDY26883	Canola	mitochondrion, plastid, vacuole	64.6	66.24
Solyc12g017450.1.1	Tomato	cytosol, plasma membrane, plastid	64.39	65.89
CDX96804	Canola	plastid	63.98	65.74
Bra016629.1-P	Field mustard	plastid	63.98	65.74
PGSC0003DMT400025021	Potato	cytosol, plasma membrane, plastid	64.18	65.68
PGSC0003DMT400025018	Potato	cytosol, mitochondrion, plasma membrane, plastid	63.98	65.47
CDX83939	Canola	cytosol, plastid, vacuole	63.56	65.46
CDY35123	Canola	plastid	62.73	65.02
KRH44594	Soybean	cytosol, plasma membrane, plastid	47.2	64.96
Bra026021.1-P	Field mustard	plastid	62.53	64.81
CDY40028	Canola	plastid	62.73	64.61
AT1G16860.1	Thale cress	cytosol, mitochondrion, plastid, vacuole	63.35	64.56
Bra008384.1-P	Field mustard	plastid	55.69	64.2
Bra035072.1-P	Field mustard	plasma membrane	63.35	55.04
TraesCS2D01G387400.1	Wheat	golgi, plasma membrane, vacuole	23.4	35.76
TraesCS7D01G384800.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	5.18	6.1

Protein Annotations

EnsemblPlants:TraesCS2D01G429500.1	EnsemblPlantsGene:TraesCS2D01G429500	PANTHER:PTHR33709	PANTHER:PTHR33709:SF4	SEG:seg	TMHMM:TMhelix
MapMan:21.1.1.3.1	:	:	:	:	:

Description

No Description!

Coordinates

chr2D:+:541472882..541475026

Molecular Weight (calculated)

51668.7 Da

IEP (calculated)

10.348

GRAVY (calculated)

-0.230

Length

483 amino acids

Sequence
(BLAST)

001: MGSRFPSHQL SSGLYVSGRP EQPKEKAPTF GSNVMPYTGG DTKKSGELGK MFELHAERSR KSGPLGSAPS RNPSFGGAAS NSGPVSNAGG RSNYSGSLSS
101: SVPGAGGSAR AKSNSGPLNK HGEPVKRSSG PQSGGVTPMA RQNSGPLPPM LPTTGLITSG PVTSGPLNSS GAPRRKVSGS LDPAASMKAR ATSLAHNQAV
201: TTLTSEGGFS VMGSISKWVF WLVITLLLFG FAVGLFILIA VHNAIVLIVV VAMIGSVAAL VSWNVWRGRR GVLRFVNSCP DTDLRTAKDG EYVKVTGVVT
301: CGNFPLESSF QRIPRCVYTS TRLYEYRGWD SKTANPKHRR FTWGLRTAER HAVDFYISDF QSGLRALVRT GSGARVTPYV DESVVIDVNP ENKDMSPEFL
401: RWLRERNLSS DGRKMRLKEG YIKEGSTVSV MGVVQKNESV LMIVPPSEPI SSGCQWGSCF FPANLEGLVV RCEDTSDMDV IPV

Best Arabidopsis Sequence Match ( AT1G16860.1 )
(BLAST)

001: MGSRYPSHQL SNGLFVSGRP EQPKERAPTM SAVAMPYTGG DIKRSGELGK MFDIPADGTK SRKSGPIPGA PSRSGSFAGT AQSGPGAPMA TGRMSGSLAS
101: AGSVSMKKTN SGPLSKHGEP LKKSSGPQSG GVTRQNSGSI PILPATGLIT SGPITSGPLN SSGAPRKVSG PLDSSGLMKS HMPTVVHNQA VTTLGPEDDF
201: SCLKSFPKPV LWLVVLIFIM GFLAGGFILG AVHNPILLVV VAILFTVVAA LFIWNICWGR RGITDFIARY PDADLRTAKN GQHVKVTGVV TCGNVPLESS
301: FHRVPRCVYT STCLYEYRGW GSKPANSSHR HFTWGLRSSE RHVVDFYISD FQSGLRALVK TGSGAKVTPL VDDSVVIDFK QGSEQVSPDF VRWLGKKNLT
401: SDDRIMRLKE GYIKEGSTVS VIGVVQRNDN VLMIVPSSEP LAAGWQWRRC TFPTSLEGIV LRCEDSSNVD AIPV

Arabidopsis Description

Uncharacterized membrane protein At1g16860 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ45]
SUBAcon: [mitochondrion,plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.