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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • mitochondrion 1
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra026021.1-P Field mustard plastid 99.57 99.57
CDY40028 Canola plastid 98.28 97.65
CDX96804 Canola plastid 89.91 89.15
CDX83939 Canola cytosol, plastid, vacuole 89.06 88.49
AT1G16860.1 Thale cress cytosol, mitochondrion, plastid, vacuole 88.2 86.71
CDX87427 Canola mitochondrion, plastid, vacuole 83.05 82.69
CDY14586 Canola plastid 83.05 82.17
CDX88486 Canola mitochondrion, plastid, vacuole 82.4 82.05
CDX83594 Canola plastid 82.83 81.95
CDY26883 Canola mitochondrion, plastid, vacuole 81.55 80.68
KRH46999 Soybean plastid 74.03 72.18
KRH44657 Soybean plastid 73.39 71.55
KRH09609 Soybean plastid 71.89 70.82
PGSC0003DMT400023759 Potato cytosol, mitochondrion, plasma membrane, plastid 72.1 70.29
KRH23708 Soybean plastid 72.1 69.71
EES12814 Sorghum plastid 70.6 68.4
Solyc03g123920.2.1 Tomato plastid 65.02 68.4
Zm00001d026258_P001 Maize cytosol, plastid, vacuole 70.6 68.26
Os08t0230200-01 Rice cytosol, plastid 70.39 67.91
VIT_09s0018g01240.t01 Wine grape plastid 69.74 67.29
Zm00001d050191_P003 Maize plasma membrane 67.17 65.48
KXG24772 Sorghum cytosol, plasma membrane, plastid 66.74 65.06
Os04t0606500-01 Rice plasma membrane 66.95 64.73
HORVU7Hr1G061070.1 Barley cytosol, plasma membrane, plastid 66.74 64.52
Zm00001d024364_P001 Maize plasma membrane 67.38 63.43
TraesCS2D01G429500.1 Wheat cytosol, plasma membrane, plastid 65.02 62.73
TraesCS2A01G431500.2 Wheat cytosol, plasma membrane, plastid 65.02 62.73
Zm00001d002391_P005 Maize cytosol, plasma membrane, plastid 70.17 62.52
HORVU2Hr1G100660.2 Barley cytosol, plasma membrane, plastid 64.59 62.32
TraesCS2B01G453000.2 Wheat cytosol, plasma membrane, plastid 64.59 62.32
TraesCS2D01G429600.1 Wheat cytosol, nucleus, plastid 58.15 62.01
TraesCS7D01G282000.3 Wheat mitochondrion 66.31 61.92
TraesCS7A01G283600.2 Wheat mitochondrion 66.31 61.92
TraesCS2A01G431600.1 Wheat cytosol, nucleus, plastid 57.73 61.56
TraesCS2B01G453100.1 Wheat cytosol, nucleus, plastid 57.73 61.56
HORVU2Hr1G100700.2 Barley plastid 57.08 60.87
TraesCS7B01G176900.2 Wheat plasma membrane 66.74 59.35
CDX82929 Canola cytosol, plasma membrane, plastid 47.21 49.89
CDX94089 Canola cytosol, plasma membrane, plastid 47.21 49.77
CDX79143 Canola cytosol, plasma membrane, plastid 47.0 49.44
CDX98741 Canola cytosol, plasma membrane, plastid 46.78 49.43
CDY33180 Canola cytosol 15.67 49.32
CDY16692 Canola cytosol, plasma membrane, plastid 44.85 48.83
CDX94532 Canola cytosol, plasma membrane, plastid 44.42 48.48
GSMUA_Achr3P28220_001 Banana mitochondrion 9.01 9.17
GSMUA_Achr4P20140_001 Banana mitochondrion, plasma membrane, plastid 7.94 8.94
Protein Annotations
EnsemblPlants:CDY35123EnsemblPlantsGene:GSBRNA2T00058007001GO:A0A078HE91GO:GO:0005575GO:GO:0016020GO:GO:0016021
PANTHER:PTHR33709PANTHER:PTHR33709:SF9ProteinID:CDY35123ProteinID:CDY35123.1SEG:segTMHMM:TMhelix
UniParc:UPI0004EDFE6DUniProt:A0A078HE91MapMan:21.1.1.3.1:::
Description
BnaA06g11330DBnaA06g11330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HE91]
Coordinates
chrLK032346:+:337701..339663
Molecular Weight (calculated)
50032.2 Da
IEP (calculated)
10.214
GRAVY (calculated)
-0.155
Length
466 amino acids
Sequence
(BLAST)
001: MGSRYPSHQL GNGLFVSGRP EQPKERPPTM SSVAMPYTGG DIKKSGELGK MFEIPTDGSK SRKSGPIPGA PSRSGSFAQS GQGAPNASTT RMSGSLASAA
101: GSLSMKKTNS GPLSKHGEPL KKSSGPQSRQ NSGPIPVVLP ATGLITSGPL NSSGAPRKVS GPLDSAGSLK THMPSVVVHN PAVTTLGPPD DFSSLKSFPK
201: PVLWLIVLIF IMGFLAGGFI LGAVHNPMLL IVVAIFFAVV ATLFIWNVCW GRRGVVDFVA RYPDADLRTA KNGQYVKVTG VVTCGNVPLE SSYQRVPRCV
301: YTSTCLYEYR GWGSKPANSS HRLFTWGLRS SERHVVDFYI SDFQSGLRAL VKTGNGAKVT PLVDDSAVVD FKHGNEQMSP DFVHWLKKKN LSSDDRIMRL
401: KEGYIKEGST VSVIGVVQRN DNVLMIVPPS EPLAAGWQWR RCTFPTTLEG VVLRCEDSSN VDAIPV
Best Arabidopsis Sequence Match ( AT1G16860.1 )
(BLAST)
001: MGSRYPSHQL SNGLFVSGRP EQPKERAPTM SAVAMPYTGG DIKRSGELGK MFDIPADGTK SRKSGPIPGA PSRSGSFAGT AQSGPGAPMA TGRMSGSLAS
101: AGSVSMKKTN SGPLSKHGEP LKKSSGPQSG GVTRQNSGSI PILPATGLIT SGPITSGPLN SSGAPRKVSG PLDSSGLMKS HMPTVVHNQA VTTLGPEDDF
201: SCLKSFPKPV LWLVVLIFIM GFLAGGFILG AVHNPILLVV VAILFTVVAA LFIWNICWGR RGITDFIARY PDADLRTAKN GQHVKVTGVV TCGNVPLESS
301: FHRVPRCVYT STCLYEYRGW GSKPANSSHR HFTWGLRSSE RHVVDFYISD FQSGLRALVK TGSGAKVTPL VDDSVVIDFK QGSEQVSPDF VRWLGKKNLT
401: SDDRIMRLKE GYIKEGSTVS VIGVVQRNDN VLMIVPSSEP LAAGWQWRRC TFPTSLEGIV LRCEDSSNVD AIPV
Arabidopsis Description
Uncharacterized membrane protein At1g16860 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ45]
SUBAcon: [mitochondrion,plastid,vacuole,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.