CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, vacuole

Predictor Summary:

nucleus 1
mitochondrion 2
vacuole 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid, vacuole
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88486	Canola	mitochondrion, plastid, vacuole	99.36	99.36
CDY14586	Canola	plastid	94.66	94.06
CDX83594	Canola	plastid	94.44	93.84
AT1G78880.1	Thale cress	plastid	92.95	92.95
CDY26883	Canola	mitochondrion, plastid, vacuole	93.16	92.57
CDX83939	Canola	cytosol, plastid, vacuole	83.97	83.8
CDX96804	Canola	plastid	83.55	83.19
CDY35123	Canola	plastid	82.69	83.05
Bra035072.1-P	Field mustard	plasma membrane	98.29	82.73
CDY40028	Canola	plastid	82.91	82.73
KRH46999	Soybean	plastid	73.5	71.97
KRH44657	Soybean	plastid	73.29	71.76
KRH09609	Soybean	plastid	71.58	70.82
PGSC0003DMT400023759	Potato	cytosol, mitochondrion, plasma membrane, plastid	71.79	70.29
KRH23708	Soybean	plastid	71.58	69.5
Solyc03g123920.2.1	Tomato	plastid	65.38	69.07
EES12814	Sorghum	plastid	70.51	68.61
Zm00001d026258_P001	Maize	cytosol, plastid, vacuole	70.51	68.46
VIT_09s0018g01240.t01	Wine grape	plastid	69.23	67.08
Os08t0230200-01	Rice	cytosol, plastid	69.23	67.08
Zm00001d050191_P003	Maize	plasma membrane	67.52	66.11
KXG24772	Sorghum	cytosol, plasma membrane, plastid	67.09	65.69
TraesCS2D01G429500.1	Wheat	cytosol, plasma membrane, plastid	66.67	64.6
TraesCS2B01G453000.2	Wheat	cytosol, plasma membrane, plastid	66.45	64.39
TraesCS2A01G431500.2	Wheat	cytosol, plasma membrane, plastid	66.45	64.39
Os04t0606500-01	Rice	plasma membrane	66.24	64.32
HORVU2Hr1G100660.2	Barley	cytosol, plasma membrane, plastid	66.24	64.18
HORVU7Hr1G061070.1	Barley	cytosol, plasma membrane, plastid	65.6	63.69
Zm00001d002391_P005	Maize	cytosol, plasma membrane, plastid	70.3	62.91
Zm00001d024364_P001	Maize	plasma membrane	66.03	62.42
TraesCS2D01G429600.1	Wheat	cytosol, nucleus, plastid	58.12	62.24
TraesCS2A01G431600.1	Wheat	cytosol, nucleus, plastid	57.91	62.01
TraesCS2B01G453100.1	Wheat	cytosol, nucleus, plastid	57.91	62.01
TraesCS7A01G283600.2	Wheat	mitochondrion	65.38	61.32
TraesCS7D01G282000.3	Wheat	mitochondrion	65.38	61.32
HORVU2Hr1G100700.2	Barley	plastid	56.84	60.87
TraesCS7B01G176900.2	Wheat	plasma membrane	65.81	58.78
CDY33180	Canola	cytosol	17.73	56.08
CDX94532	Canola	cytosol, plasma membrane, plastid	45.09	49.41
CDY16692	Canola	cytosol, plasma membrane, plastid	44.87	49.07
CDX98741	Canola	cytosol, plasma membrane, plastid	45.51	48.3
CDX82929	Canola	cytosol, plasma membrane, plastid	45.3	48.07
CDX79143	Canola	cytosol, plasma membrane, plastid	45.3	47.86
CDX94089	Canola	cytosol, plasma membrane, plastid	45.09	47.74
GSMUA_Achr3P28220_001	Banana	mitochondrion	8.76	8.95
GSMUA_Achr4P20140_001	Banana	mitochondrion, plasma membrane, plastid	7.69	8.7

Protein Annotations

EnsemblPlants:CDX87427	EnsemblPlantsGene:GSBRNA2T00146405001	GO:A0A078DEH7	PANTHER:PTHR33709	PANTHER:PTHR33709:SF9	ProteinID:CDX87427
ProteinID:CDX87427.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EEED63	MapMan:21.1.1.3.1	:

Description

BnaA07g34460D

Coordinates

chrLK031850:+:587498..589640

Molecular Weight (calculated)

49974.7 Da

IEP (calculated)

9.857

GRAVY (calculated)

-0.201

Length

468 amino acids

Sequence
(BLAST)

001: MGSRYASHQL SNGLFVSGRP EQPKEKPPTM SSVATPYTGG DIKKSGELGK MFDIPTDGTK SRKSGPITGA SSRSGQQPGP GGPNATGRMS GSLASAGSNS
101: MKKTNSGPLS KHGEPLKKSS GPQSGNSGPI PILPTTGLIT SGPITSGPLN SSGAPRKISG PLDYSGSMKT HHHNNPSSVV HNQAVTTLAP EDDFSCMKSF
201: PKPVMWLVIL IFVMGFLAGG FILGAVHNAI LLIVVAVLFA AVAALFFWNV SCERRGITDF VARYPDADLR TAKNGQYVKV TGVVTCGNVP LESSFHRVPR
301: CVYTSTCLYE YRGWGSKPAN ASHRRFTWGL RSAERHVVDF YISDFQSGLR ALVKTGNGAK VTPIVDDSVV IDFKPGSEQA SPDFVRWLGQ KNLSNDERVM
401: RLKEGYIKEG STVSVIGVVQ RNESVLMIVP TTEPLAAGWQ WSKCTFPASL EGIVLRCEDS SNVDAIPV

Best Arabidopsis Sequence Match ( AT1G78880.1 )
(BLAST)

001: MGSRYASHQL SNGLFVSGRP EQPKEKPPTM SSVAMPYTGG DIKKSGELGK MFDIPTDGTK SRKSGPITGG SSRSGAQSGP VPNATGRMSG NLASAGSNSM
101: KKTNSGPLSK HGEPLKKSSG PQSGGVTRQN SGPIPILPTT GLITSGPITS GPLNSSGAPR KISGPLDYSG SMKTHMPSVV HNQAVTTLAP EDDFSCMKSF
201: PKPVLWLVIL IFVMGFLAGG FILGAVHNAI LLIVVAVLFT VVAALFIWNI SCERRGITDF IARYPDADLR TAKNGQYVKV TGVVTCGNVP LESSFHRVPR
301: CVYTSTCLYE YRGWGSKPAN ASHRRFTWGL RSAERHVVDF YISDFQSGLR ALVKTGNGAK VTPLVDDSVV IDFKPGNEQA SPDFVRWLGK KNLTNDDRIM
401: RLKEGYIKEG STVSVIGVVQ RNDNVLMIVP TTEPLAAGWQ WSKCTFPASL EGIVLRCEDS SNVDAIPV

Arabidopsis Description

F9K20.7 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZVA7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.