CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
cytosol 1
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH23708	Soybean	plastid	97.04	95.23
KRH46999	Soybean	plastid	91.97	91.0
KRH44657	Soybean	plastid	91.75	90.8
KRH44603	Soybean	cytosol	23.47	82.84
PGSC0003DMT400023759	Potato	cytosol, mitochondrion, plasma membrane, plastid	80.34	79.5
KRH47297	Soybean	cytosol, plasma membrane, plastid	81.18	79.34
VIT_09s0018g01240.t01	Wine grape	plastid	80.97	79.3
KRH44594	Soybean	cytosol, plasma membrane, plastid	57.93	78.06
Solyc03g123920.2.1	Tomato	plastid	71.25	76.07
Os08t0230200-01	Rice	cytosol, plastid	76.96	75.36
Zm00001d026258_P001	Maize	cytosol, plastid, vacuole	76.53	75.1
EES12814	Sorghum	plastid	76.11	74.84
AT1G78880.1	Thale cress	plastid	72.52	73.29
CDX96804	Canola	plastid	72.73	73.19
Bra016629.1-P	Field mustard	plastid	72.3	72.77
CDX83939	Canola	cytosol, plastid, vacuole	71.88	72.49
KXG24772	Sorghum	cytosol, plasma membrane, plastid	72.94	72.18
CDY35123	Canola	plastid	70.82	71.89
Bra026021.1-P	Field mustard	plastid	70.82	71.89
AT1G16860.1	Thale cress	cytosol, mitochondrion, plastid, vacuole	71.88	71.73
CDY40028	Canola	plastid	71.04	71.64
CDX87427	Canola	mitochondrion, plastid, vacuole	70.82	71.58
CDX88486	Canola	mitochondrion, plastid, vacuole	70.61	71.37
Zm00001d050191_P003	Maize	plasma membrane	72.09	71.34
Os04t0606500-01	Rice	plasma membrane	72.09	70.75
CDY14586	Canola	plastid	70.4	70.7
CDX83594	Canola	plastid	70.19	70.49
HORVU7Hr1G061070.1	Barley	cytosol, plasma membrane, plastid	71.67	70.33
CDY26883	Canola	mitochondrion, plastid, vacuole	69.34	69.64
Zm00001d002391_P005	Maize	cytosol, plasma membrane, plastid	76.11	68.83
TraesCS2D01G429500.1	Wheat	cytosol, plasma membrane, plastid	69.77	68.32
Zm00001d024364_P001	Maize	plasma membrane	71.46	68.28
Bra008384.1-P	Field mustard	plastid	60.47	68.26
HORVU2Hr1G100660.2	Barley	cytosol, plasma membrane, plastid	69.56	68.12
TraesCS2A01G431500.2	Wheat	cytosol, plasma membrane, plastid	69.56	68.12
TraesCS2B01G453000.2	Wheat	cytosol, plasma membrane, plastid	69.56	68.12
TraesCS7A01G283600.2	Wheat	mitochondrion	71.67	67.94
TraesCS7D01G282000.3	Wheat	mitochondrion	71.67	67.94
TraesCS2B01G453100.1	Wheat	cytosol, nucleus, plastid	62.37	67.51
TraesCS2D01G429600.1	Wheat	cytosol, nucleus, plastid	62.37	67.51
TraesCS2A01G431600.1	Wheat	cytosol, nucleus, plastid	61.95	67.05
HORVU2Hr1G100700.2	Barley	plastid	61.1	66.13
TraesCS7B01G176900.2	Wheat	plasma membrane	72.09	65.08
Bra035072.1-P	Field mustard	plasma membrane	69.56	59.17
KRH11512	Soybean	plastid	48.41	54.92
KRH36527	Soybean	plastid	47.78	53.81
GSMUA_Achr3P28220_001	Banana	mitochondrion	9.73	10.04
GSMUA_Achr4P20140_001	Banana	mitochondrion, plasma membrane, plastid	8.46	9.66

Protein Annotations

EMBL:ACUP02009103	EnsemblPlants:KRH09609	EnsemblPlantsGene:GLYMA_15G001200	EntrezGene:100820076	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	PANTHER:PTHR33709	PANTHER:PTHR33709:SF4	ProteinID:KRH09609	ProteinID:KRH09609.1	SEG:seg
TMHMM:TMhelix	UniParc:UPI000233B2D7	UniProt:I1MC83	MapMan:21.1.1.3.1	:	:

Description

hypothetical protein

Coordinates

chr15:-:126171..130083

Molecular Weight (calculated)

51176.5 Da

IEP (calculated)

9.916

GRAVY (calculated)

-0.163

Length

473 amino acids

Sequence
(BLAST)

001: MGSRFPSHQL SNGLYVSGRP EQPKERTPTM TSVAMPYTGG DIKKSGELGK MFDIPMDASK SRKSGQLNNA PSRTGSFAAA ASHSGPILPN TAPRSIYTTS
101: SGGMAASLSM KKTNSGPLNK HGEPVKKSSG PQSGGVTRQN SGPIPHVLPT TGLITSGPLN SSGAPRKVSG PLEFSGSMKS HTSVTHNPAM TTLSLDDEYS
201: FRRNFPKPIL WSVILIFVMG FIAGAFILGA VHNAILLVVV VVLFGAVAAL FTWNSCCGRT AIVGFISRYP DAELRTAKNG QFVKVSGVVT CGNVPLESSF
301: QKVPRCVYTS TSLFEYRGWD SKAANPKHRH FTWGLRAAER HVVDFYISDF QSGLRALVKT GYGARVTPYV DDSIVIDVNP DNKDMSPEFL RWLRERNLSS
401: DDRLMQLKEG YIKEGSTVSV MGVVQRNDNV LMIVPPPEPL TTGCQWAKCI FPASLEGIIL RCEDTSKIDV IPV

Best Arabidopsis Sequence Match ( AT1G16860.1 )
(BLAST)

001: MGSRYPSHQL SNGLFVSGRP EQPKERAPTM SAVAMPYTGG DIKRSGELGK MFDIPADGTK SRKSGPIPGA PSRSGSFAGT AQSGPGAPMA TGRMSGSLAS
101: AGSVSMKKTN SGPLSKHGEP LKKSSGPQSG GVTRQNSGSI PILPATGLIT SGPITSGPLN SSGAPRKVSG PLDSSGLMKS HMPTVVHNQA VTTLGPEDDF
201: SCLKSFPKPV LWLVVLIFIM GFLAGGFILG AVHNPILLVV VAILFTVVAA LFIWNICWGR RGITDFIARY PDADLRTAKN GQHVKVTGVV TCGNVPLESS
301: FHRVPRCVYT STCLYEYRGW GSKPANSSHR HFTWGLRSSE RHVVDFYISD FQSGLRALVK TGSGAKVTPL VDDSVVIDFK QGSEQVSPDF VRWLGKKNLT
401: SDDRIMRLKE GYIKEGSTVS VIGVVQRNDN VLMIVPSSEP LAAGWQWRRC TFPTSLEGIV LRCEDSSNVD AIPV

Arabidopsis Description

Uncharacterized membrane protein At1g16860 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ45]
SUBAcon: [mitochondrion,plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.