Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- vacuole 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX87427 | Canola | mitochondrion, plastid, vacuole | 99.36 | 99.36 |
| CDY14586 | Canola | plastid | 94.02 | 93.42 |
| CDX83594 | Canola | plastid | 93.8 | 93.21 |
| AT1G78880.1 | Thale cress | plastid | 92.31 | 92.31 |
| CDY26883 | Canola | mitochondrion, plastid, vacuole | 92.52 | 91.93 |
| CDX83939 | Canola | cytosol, plastid, vacuole | 83.55 | 83.37 |
| CDX96804 | Canola | plastid | 83.12 | 82.77 |
| CDY35123 | Canola | plastid | 82.05 | 82.4 |
| Bra035072.1-P | Field mustard | plasma membrane | 97.65 | 82.19 |
| CDY40028 | Canola | plastid | 82.27 | 82.09 |
| KRH46999 | Soybean | plastid | 73.29 | 71.76 |
| KRH44657 | Soybean | plastid | 73.08 | 71.55 |
| KRH09609 | Soybean | plastid | 71.37 | 70.61 |
| PGSC0003DMT400023759 | Potato | cytosol, mitochondrion, plasma membrane, plastid | 71.79 | 70.29 |
| KRH23708 | Soybean | plastid | 71.37 | 69.29 |
| Solyc03g123920.2.1 | Tomato | plastid | 65.38 | 69.07 |
| Zm00001d026258_P001 | Maize | cytosol, plastid, vacuole | 70.51 | 68.46 |
| EES12814 | Sorghum | plastid | 70.3 | 68.4 |
| Os08t0230200-01 | Rice | cytosol, plastid | 69.23 | 67.08 |
| VIT_09s0018g01240.t01 | Wine grape | plastid | 68.8 | 66.67 |
| Zm00001d050191_P003 | Maize | plasma membrane | 67.31 | 65.9 |
| KXG24772 | Sorghum | cytosol, plasma membrane, plastid | 66.88 | 65.48 |
| TraesCS2D01G429500.1 | Wheat | cytosol, plasma membrane, plastid | 66.45 | 64.39 |
| TraesCS2B01G453000.2 | Wheat | cytosol, plasma membrane, plastid | 66.24 | 64.18 |
| TraesCS2A01G431500.2 | Wheat | cytosol, plasma membrane, plastid | 66.24 | 64.18 |
| HORVU2Hr1G100660.2 | Barley | cytosol, plasma membrane, plastid | 66.03 | 63.98 |
| Os04t0606500-01 | Rice | plasma membrane | 65.81 | 63.9 |
| HORVU7Hr1G061070.1 | Barley | cytosol, plasma membrane, plastid | 65.38 | 63.49 |
| Zm00001d002391_P005 | Maize | cytosol, plasma membrane, plastid | 70.3 | 62.91 |
| Zm00001d024364_P001 | Maize | plasma membrane | 65.6 | 62.02 |
| TraesCS2D01G429600.1 | Wheat | cytosol, nucleus, plastid | 57.91 | 62.01 |
| TraesCS2A01G431600.1 | Wheat | cytosol, nucleus, plastid | 57.69 | 61.78 |
| TraesCS2B01G453100.1 | Wheat | cytosol, nucleus, plastid | 57.69 | 61.78 |
| TraesCS7A01G283600.2 | Wheat | mitochondrion | 65.17 | 61.12 |
| TraesCS7D01G282000.3 | Wheat | mitochondrion | 65.17 | 61.12 |
| HORVU2Hr1G100700.2 | Barley | plastid | 56.62 | 60.64 |
| TraesCS7B01G176900.2 | Wheat | plasma membrane | 65.6 | 58.59 |
| CDY33180 | Canola | cytosol | 17.73 | 56.08 |
| CDX94532 | Canola | cytosol, plasma membrane, plastid | 44.87 | 49.18 |
| CDY16692 | Canola | cytosol, plasma membrane, plastid | 44.87 | 49.07 |
| CDX98741 | Canola | cytosol, plasma membrane, plastid | 45.3 | 48.07 |
| CDX82929 | Canola | cytosol, plasma membrane, plastid | 45.09 | 47.85 |
| CDX79143 | Canola | cytosol, plasma membrane, plastid | 45.09 | 47.63 |
| CDX94089 | Canola | cytosol, plasma membrane, plastid | 44.87 | 47.51 |
| GSMUA_Achr3P28220_001 | Banana | mitochondrion | 8.76 | 8.95 |
| GSMUA_Achr4P20140_001 | Banana | mitochondrion, plasma membrane, plastid | 7.69 | 8.7 |
Protein Annotations
| EnsemblPlants:CDX88486 | EnsemblPlantsGene:GSBRNA2T00148034001 | GO:A0A078DGT5 | PANTHER:PTHR33709 | PANTHER:PTHR33709:SF9 | ProteinID:CDX88486 |
| ProteinID:CDX88486.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EB17D8 | MapMan:21.1.1.3.1 | : |
Description
BnaC06g39300D
Coordinates
chrLK031855:-:1244445..1246665
Molecular Weight (calculated)
49972.8 Da
IEP (calculated)
9.849
GRAVY (calculated)
-0.207
Length
468 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSRYASHQL SNGLFVSGRP EQPKEKPPTM SSVATPYTGG DIKKSGELGK MFDIPTDGTK SRKSGPITGA SSRSGQQPGP GGPNATGRMS GSLASTGSNS
101: MKKTNSGPLS KHGEPLKKSS GPQSGNSGPI PILPTTGLIT SGPITSGPLN SSGAPRKISG PLDYSGSMKP HHHNNPSSVV HNQAVTTLAP EDDFSCMKSF
201: PKPVMWLVIL IFVMGFLAGG FILGAVHNAI LLIVVAVLFA AVAALFFWNV SCEKRGITDF VARYPDADLR TAKNGQYVKV TGVVTCGNVP LESSFHRVPR
301: CVYTSTCLYE YRGWGSKPAN ASHRRFTWGL RSAERHVVDF YISDFQSGLR ALVKTGNGAK VTPIVDDSVV IDFKPGSEQA SPDFVRWLGQ KNLSNDERVM
401: RLKEGYIKEG STVSVIGVVQ RNESVLMIVP TTEPLAAGWQ WSKCTFPASL EGIVLRCEDS SNVDAIPV
101: MKKTNSGPLS KHGEPLKKSS GPQSGNSGPI PILPTTGLIT SGPITSGPLN SSGAPRKISG PLDYSGSMKP HHHNNPSSVV HNQAVTTLAP EDDFSCMKSF
201: PKPVMWLVIL IFVMGFLAGG FILGAVHNAI LLIVVAVLFA AVAALFFWNV SCEKRGITDF VARYPDADLR TAKNGQYVKV TGVVTCGNVP LESSFHRVPR
301: CVYTSTCLYE YRGWGSKPAN ASHRRFTWGL RSAERHVVDF YISDFQSGLR ALVKTGNGAK VTPIVDDSVV IDFKPGSEQA SPDFVRWLGQ KNLSNDERVM
401: RLKEGYIKEG STVSVIGVVQ RNESVLMIVP TTEPLAAGWQ WSKCTFPASL EGIVLRCEDS SNVDAIPV
001: MGSRYASHQL SNGLFVSGRP EQPKEKPPTM SSVAMPYTGG DIKKSGELGK MFDIPTDGTK SRKSGPITGG SSRSGAQSGP VPNATGRMSG NLASAGSNSM
101: KKTNSGPLSK HGEPLKKSSG PQSGGVTRQN SGPIPILPTT GLITSGPITS GPLNSSGAPR KISGPLDYSG SMKTHMPSVV HNQAVTTLAP EDDFSCMKSF
201: PKPVLWLVIL IFVMGFLAGG FILGAVHNAI LLIVVAVLFT VVAALFIWNI SCERRGITDF IARYPDADLR TAKNGQYVKV TGVVTCGNVP LESSFHRVPR
301: CVYTSTCLYE YRGWGSKPAN ASHRRFTWGL RSAERHVVDF YISDFQSGLR ALVKTGNGAK VTPLVDDSVV IDFKPGNEQA SPDFVRWLGK KNLTNDDRIM
401: RLKEGYIKEG STVSVIGVVQ RNDNVLMIVP TTEPLAAGWQ WSKCTFPASL EGIVLRCEDS SNVDAIPV
101: KKTNSGPLSK HGEPLKKSSG PQSGGVTRQN SGPIPILPTT GLITSGPITS GPLNSSGAPR KISGPLDYSG SMKTHMPSVV HNQAVTTLAP EDDFSCMKSF
201: PKPVLWLVIL IFVMGFLAGG FILGAVHNAI LLIVVAVLFT VVAALFIWNI SCERRGITDF IARYPDADLR TAKNGQYVKV TGVVTCGNVP LESSFHRVPR
301: CVYTSTCLYE YRGWGSKPAN ASHRRFTWGL RSAERHVVDF YISDFQSGLR ALVKTGNGAK VTPLVDDSVV IDFKPGNEQA SPDFVRWLGK KNLTNDDRIM
401: RLKEGYIKEG STVSVIGVVQ RNDNVLMIVP TTEPLAAGWQ WSKCTFPASL EGIVLRCEDS SNVDAIPV
Arabidopsis Description
F9K20.7 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZVA7]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.