CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra029474.1-P	Field mustard	cytosol, plasma membrane, plastid	92.29	99.25
CDX94532	Canola	cytosol, plasma membrane, plastid	94.86	95.08
CDX98741	Canola	cytosol, plasma membrane, plastid	74.3	72.11
CDX94089	Canola	cytosol, plasma membrane, plastid	73.83	71.49
CDX82929	Canola	cytosol, plasma membrane, plastid	72.66	70.52
CDX79143	Canola	cytosol, plasma membrane, plastid	72.43	69.98
KRH11512	Soybean	plastid	60.28	61.87
KRH36527	Soybean	plastid	59.81	60.95
Solyc04g014680.2.1	Tomato	plastid	56.78	55.99
Solyc11g012040.1.1	Tomato	plastid	52.8	52.19
PGSC0003DMT400034711	Potato	mitochondrion, plastid	52.57	51.96
PGSC0003DMT400060565	Potato	plastid	57.48	47.77
CDX83939	Canola	cytosol, plastid, vacuole	50.7	46.27
CDX96804	Canola	plastid	50.23	45.74
CDY26883	Canola	mitochondrion, plastid, vacuole	49.53	45.01
CDX88486	Canola	mitochondrion, plastid, vacuole	49.07	44.87
CDX87427	Canola	mitochondrion, plastid, vacuole	49.07	44.87
CDY35123	Canola	plastid	48.83	44.85
CDY14586	Canola	plastid	49.3	44.8
CDX83594	Canola	plastid	49.3	44.8
CDY40028	Canola	plastid	49.07	44.78
GSMUA_Achr5P19960_001	Banana	extracellular, plasma membrane, vacuole	24.07	35.64
CDY33180	Canola	cytosol	11.45	33.11
VIT_15s0048g02880.t01	Wine grape	plasma membrane	25.0	32.72
Zm00001d025966_P001	Maize	golgi, peroxisome, plasma membrane	23.83	31.88
Os04t0541900-00	Rice	cytosol, golgi, peroxisome	23.6	31.76
EES11199	Sorghum	cytosol, endoplasmic reticulum, golgi	24.3	31.42
TraesCS2B01G407700.1	Wheat	golgi, peroxisome, vacuole	23.36	31.25
TraesCS2D01G387400.1	Wheat	golgi, plasma membrane, vacuole	22.66	30.7
HORVU2Hr1G092730.3	Barley	endoplasmic reticulum	21.03	30.61
TraesCS2A01G389500.1	Wheat	golgi, plasma membrane, vacuole	22.66	30.5
Zm00001d046644_P001	Maize	nucleus, plasma membrane, plastid	6.54	7.89
KXG20435	Sorghum	nucleus, plasma membrane, plastid	6.31	6.62
TraesCS7B01G290800.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	5.84	6.13
TraesCS7D01G384800.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	5.84	6.1
TraesCS7A01G388900.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	5.61	5.85
HORVU0Hr1G022000.9	Barley	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDY16692	EnsemblPlantsGene:GSBRNA2T00094544001	GO:A0A078FV72	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR33709	PANTHER:PTHR33709:SF2	ProteinID:CDY16692	ProteinID:CDY16692.1	SEG:seg	TMHMM:TMhelix
UniParc:UPI0004EEC1A9	UniProt:A0A078FV72	MapMan:35.1	:	:	:

Description

BnaA09g20700DBnaA09g20700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FV72]

Coordinates

chrLK032066:-:571090..573592

Molecular Weight (calculated)

45990.4 Da

IEP (calculated)

10.236

GRAVY (calculated)

-0.072

Length

428 amino acids

Sequence
(BLAST)

001: MASRLQSHQL PSGLYVSGKL EQPKETRPPT MAARAMPYTG GDIKKSGELG RMFDISFADP TSFHGGGAAR PPPTRVHSSS ASSSNPNSGP VRSGSQSGPV
101: RKSSGPLSQL QPTGLITSGP LNSSGQIGSG SRRSGPLDHH HQTSNLRPST KPKYGSAVTV LNSDPVRVGF KVPKALVWAV VVVAATALLI GTFLAVAVKK
201: PLIIVAIAAA IVPAVVVFVW NCVWRRRGLL GFIKNYPNAV LRGAIDGQFI KVTGVVTCGS TPLESSYQKI PRCVYVSTEL YEYKGCSWGS RHAERYVSDF
301: YISDFQSGLR ALVKAGYGSK VSPFVIPETV ANVTAQTKDL SPSFLQWLAD RSLSNDSRAM RLKEGYIKEG STVSVMGMVR RHDNVLMIIP PAESVATGCK
401: WWRCLFPAYV EGLIITCDEN QNADVIPV

Best Arabidopsis Sequence Match ( AT1G16860.1 )
(BLAST)

001: MGSRYPSHQL SNGLFVSGRP EQPKERAPTM SAVAMPYTGG DIKRSGELGK MFDIPADGTK SRKSGPIPGA PSRSGSFAGT AQSGPGAPMA TGRMSGSLAS
101: AGSVSMKKTN SGPLSKHGEP LKKSSGPQSG GVTRQNSGSI PILPATGLIT SGPITSGPLN SSGAPRKVSG PLDSSGLMKS HMPTVVHNQA VTTLGPEDDF
201: SCLKSFPKPV LWLVVLIFIM GFLAGGFILG AVHNPILLVV VAILFTVVAA LFIWNICWGR RGITDFIARY PDADLRTAKN GQHVKVTGVV TCGNVPLESS
301: FHRVPRCVYT STCLYEYRGW GSKPANSSHR HFTWGLRSSE RHVVDFYISD FQSGLRALVK TGSGAKVTPL VDDSVVIDFK QGSEQVSPDF VRWLGKKNLT
401: SDDRIMRLKE GYIKEGSTVS VIGVVQRNDN VLMIVPSSEP LAAGWQWRRC TFPTSLEGIV LRCEDSSNVD AIPV

Arabidopsis Description

Uncharacterized membrane protein At1g16860 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ45]
SUBAcon: [mitochondrion,plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.