Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83594 | Canola | plastid | 99.79 | 99.79 |
| CDY26883 | Canola | mitochondrion, plastid, vacuole | 97.45 | 97.45 |
| CDX87427 | Canola | mitochondrion, plastid, vacuole | 94.06 | 94.66 |
| CDX88486 | Canola | mitochondrion, plastid, vacuole | 93.42 | 94.02 |
| AT1G78880.1 | Thale cress | plastid | 91.3 | 91.88 |
| CDX83939 | Canola | cytosol, plastid, vacuole | 83.23 | 83.58 |
| CDY40028 | Canola | plastid | 83.01 | 83.37 |
| CDX96804 | Canola | plastid | 83.01 | 83.19 |
| CDY35123 | Canola | plastid | 82.17 | 83.05 |
| KRH46999 | Soybean | plastid | 72.82 | 71.76 |
| KRH44657 | Soybean | plastid | 72.4 | 71.34 |
| KRH09609 | Soybean | plastid | 70.7 | 70.4 |
| PGSC0003DMT400023759 | Potato | cytosol, mitochondrion, plasma membrane, plastid | 71.34 | 70.29 |
| KRH23708 | Soybean | plastid | 70.7 | 69.09 |
| Solyc03g123920.2.1 | Tomato | plastid | 64.97 | 69.07 |
| Zm00001d026258_P001 | Maize | cytosol, plastid, vacuole | 70.28 | 68.67 |
| EES12814 | Sorghum | plastid | 70.06 | 68.61 |
| Os08t0230200-01 | Rice | cytosol, plastid | 69.0 | 67.29 |
| VIT_09s0018g01240.t01 | Wine grape | plastid | 68.79 | 67.08 |
| Zm00001d050191_P003 | Maize | plasma membrane | 67.3 | 66.32 |
| KXG24772 | Sorghum | cytosol, plasma membrane, plastid | 66.67 | 65.69 |
| TraesCS2D01G429500.1 | Wheat | cytosol, plasma membrane, plastid | 66.88 | 65.22 |
| TraesCS2B01G453000.2 | Wheat | cytosol, plasma membrane, plastid | 66.67 | 65.01 |
| TraesCS2A01G431500.2 | Wheat | cytosol, plasma membrane, plastid | 66.67 | 65.01 |
| HORVU2Hr1G100660.2 | Barley | cytosol, plasma membrane, plastid | 66.45 | 64.8 |
| Os04t0606500-01 | Rice | plasma membrane | 66.03 | 64.52 |
| HORVU7Hr1G061070.1 | Barley | cytosol, plasma membrane, plastid | 65.39 | 63.9 |
| TraesCS2D01G429600.1 | Wheat | cytosol, nucleus, plastid | 58.81 | 63.39 |
| TraesCS2A01G431600.1 | Wheat | cytosol, nucleus, plastid | 58.6 | 63.16 |
| TraesCS2B01G453100.1 | Wheat | cytosol, nucleus, plastid | 58.6 | 63.16 |
| Zm00001d002391_P005 | Maize | cytosol, plasma membrane, plastid | 69.85 | 62.91 |
| Zm00001d024364_P001 | Maize | plasma membrane | 65.61 | 62.42 |
| HORVU2Hr1G100700.2 | Barley | plastid | 57.11 | 61.56 |
| TraesCS7A01G283600.2 | Wheat | mitochondrion | 65.18 | 61.52 |
| TraesCS7D01G282000.3 | Wheat | mitochondrion | 65.18 | 61.52 |
| TraesCS7B01G176900.2 | Wheat | plasma membrane | 65.61 | 58.97 |
| CDY33180 | Canola | cytosol | 17.62 | 56.08 |
| CDX94532 | Canola | cytosol, plasma membrane, plastid | 44.8 | 49.41 |
| CDY16692 | Canola | cytosol, plasma membrane, plastid | 44.8 | 49.3 |
| CDX82929 | Canola | cytosol, plasma membrane, plastid | 45.86 | 48.98 |
| CDX79143 | Canola | cytosol, plasma membrane, plastid | 45.86 | 48.76 |
| CDX98741 | Canola | cytosol, plasma membrane, plastid | 45.44 | 48.53 |
| CDX94089 | Canola | cytosol, plasma membrane, plastid | 45.44 | 48.42 |
| GSMUA_Achr3P28220_001 | Banana | mitochondrion | 8.92 | 9.17 |
| GSMUA_Achr4P20140_001 | Banana | mitochondrion, plasma membrane, plastid | 7.86 | 8.94 |
Protein Annotations
| EnsemblPlants:CDY14586 | EnsemblPlantsGene:GSBRNA2T00084301001 | GO:A0A078FNC5 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR33709 | PANTHER:PTHR33709:SF9 | ProteinID:CDY14586 | ProteinID:CDY14586.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0004EE24AF | UniProt:A0A078FNC5 | MapMan:21.1.1.3.1 | : | : | : |
Description
BnaC02g25270DBnaC02g25270D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FNC5]
Coordinates
chrLK032045:+:31200..33972
Molecular Weight (calculated)
50075.9 Da
IEP (calculated)
9.930
GRAVY (calculated)
-0.182
Length
471 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSRYASHQL SNGLFVSGGR PEQPKEKPPT MSSVATPYTG GDIKKSGELG KMFDIPTDGS KSRKSGPITG ASSRSGGQSG PLPNATGRMS GSLASAAGSS
101: SMKKTNSGPL SKHGEPLKKT SGPQSGGVTR QNSGSIPMLP TTGLITSGPI TSGPLNSSGG PRKISGPLDY SGSMKTHHKP SVVHNQAVTT LGPEDDFSCM
201: KSFPKPVLWL VILIFVMGFL SGGFILGAVH NAVLLIVVAA LFALVAALFF WNLSCERRGV TDFVGGYPDA DLRTAKNGQY VKVTGVVTCG NVPLESSFHR
301: VPRCVYTSTC LYEYRGWGSK PANASHRRFT WGLRSAERHV VDFYISDFQS GLRALVKTGN GAKVTPIVDD SVVIDFKPGS EQASPDFVRW LGQKNLSNDE
401: RVMRLKEGYI KEGSTVSVIG VVQRNESVLM IVPTTEPLAA GWQWSKCTFP ASLEGIVLRC EDSSNVDAIP V
101: SMKKTNSGPL SKHGEPLKKT SGPQSGGVTR QNSGSIPMLP TTGLITSGPI TSGPLNSSGG PRKISGPLDY SGSMKTHHKP SVVHNQAVTT LGPEDDFSCM
201: KSFPKPVLWL VILIFVMGFL SGGFILGAVH NAVLLIVVAA LFALVAALFF WNLSCERRGV TDFVGGYPDA DLRTAKNGQY VKVTGVVTCG NVPLESSFHR
301: VPRCVYTSTC LYEYRGWGSK PANASHRRFT WGLRSAERHV VDFYISDFQS GLRALVKTGN GAKVTPIVDD SVVIDFKPGS EQASPDFVRW LGQKNLSNDE
401: RVMRLKEGYI KEGSTVSVIG VVQRNESVLM IVPTTEPLAA GWQWSKCTFP ASLEGIVLRC EDSSNVDAIP V
001: MGSRYASHQL SNGLFVSGRP EQPKEKPPTM SSVAMPYTGG DIKKSGELGK MFDIPTDGTK SRKSGPITGG SSRSGAQSGP VPNATGRMSG NLASAGSNSM
101: KKTNSGPLSK HGEPLKKSSG PQSGGVTRQN SGPIPILPTT GLITSGPITS GPLNSSGAPR KISGPLDYSG SMKTHMPSVV HNQAVTTLAP EDDFSCMKSF
201: PKPVLWLVIL IFVMGFLAGG FILGAVHNAI LLIVVAVLFT VVAALFIWNI SCERRGITDF IARYPDADLR TAKNGQYVKV TGVVTCGNVP LESSFHRVPR
301: CVYTSTCLYE YRGWGSKPAN ASHRRFTWGL RSAERHVVDF YISDFQSGLR ALVKTGNGAK VTPLVDDSVV IDFKPGNEQA SPDFVRWLGK KNLTNDDRIM
401: RLKEGYIKEG STVSVIGVVQ RNDNVLMIVP TTEPLAAGWQ WSKCTFPASL EGIVLRCEDS SNVDAIPV
101: KKTNSGPLSK HGEPLKKSSG PQSGGVTRQN SGPIPILPTT GLITSGPITS GPLNSSGAPR KISGPLDYSG SMKTHMPSVV HNQAVTTLAP EDDFSCMKSF
201: PKPVLWLVIL IFVMGFLAGG FILGAVHNAI LLIVVAVLFT VVAALFIWNI SCERRGITDF IARYPDADLR TAKNGQYVKV TGVVTCGNVP LESSFHRVPR
301: CVYTSTCLYE YRGWGSKPAN ASHRRFTWGL RSAERHVVDF YISDFQSGLR ALVKTGNGAK VTPLVDDSVV IDFKPGNEQA SPDFVRWLGK KNLTNDDRIM
401: RLKEGYIKEG STVSVIGVVQ RNDNVLMIVP TTEPLAAGWQ WSKCTFPASL EGIVLRCEDS SNVDAIPV
Arabidopsis Description
F9K20.7 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZVA7]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.