Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
- plasma membrane 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX82929 | Canola | cytosol, plasma membrane, plastid | 92.53 | 92.74 |
| CDX79143 | Canola | cytosol, plasma membrane, plastid | 92.76 | 92.55 |
| CDX98741 | Canola | cytosol, plasma membrane, plastid | 92.31 | 92.52 |
| AT4G22290.1 | Thale cress | cytosol, plasma membrane, plastid | 85.52 | 84.94 |
| CDY16692 | Canola | cytosol, plasma membrane, plastid | 71.49 | 73.83 |
| CDX94532 | Canola | cytosol, plasma membrane, plastid | 70.59 | 73.07 |
| KRH11512 | Soybean | plastid | 62.44 | 66.19 |
| KRH36527 | Soybean | plastid | 61.09 | 64.29 |
| Solyc04g014680.2.1 | Tomato | plastid | 61.09 | 62.21 |
| PGSC0003DMT400034711 | Potato | mitochondrion, plastid | 55.66 | 56.81 |
| Solyc11g012040.1.1 | Tomato | plastid | 55.66 | 56.81 |
| PGSC0003DMT400060565 | Potato | plastid | 61.76 | 53.01 |
| CDX83939 | Canola | cytosol, plastid, vacuole | 50.45 | 47.55 |
| CDY35123 | Canola | plastid | 49.77 | 47.21 |
| CDY40028 | Canola | plastid | 50.0 | 47.12 |
| CDX96804 | Canola | plastid | 50.0 | 47.02 |
| CDY26883 | Canola | mitochondrion, plastid, vacuole | 48.42 | 45.44 |
| CDY14586 | Canola | plastid | 48.42 | 45.44 |
| CDX83594 | Canola | plastid | 48.42 | 45.44 |
| CDX87427 | Canola | mitochondrion, plastid, vacuole | 47.74 | 45.09 |
| CDX88486 | Canola | mitochondrion, plastid, vacuole | 47.51 | 44.87 |
| GSMUA_Achr5P19960_001 | Banana | extracellular, plasma membrane, vacuole | 24.66 | 37.72 |
| Os04t0541900-00 | Rice | cytosol, golgi, peroxisome | 26.24 | 36.48 |
| EES11199 | Sorghum | cytosol, endoplasmic reticulum, golgi | 26.92 | 35.95 |
| VIT_15s0048g02880.t01 | Wine grape | plasma membrane | 26.47 | 35.78 |
| Zm00001d025966_P001 | Maize | golgi, peroxisome, plasma membrane | 25.79 | 35.62 |
| TraesCS2B01G407700.1 | Wheat | golgi, peroxisome, vacuole | 25.34 | 35.0 |
| TraesCS2D01G387400.1 | Wheat | golgi, plasma membrane, vacuole | 24.89 | 34.81 |
| TraesCS2A01G389500.1 | Wheat | golgi, plasma membrane, vacuole | 24.89 | 34.59 |
| HORVU2Hr1G092730.3 | Barley | endoplasmic reticulum | 21.95 | 32.99 |
| CDY33180 | Canola | cytosol | 10.86 | 32.43 |
| Zm00001d046644_P001 | Maize | nucleus, plasma membrane, plastid | 5.66 | 7.04 |
| KXG20435 | Sorghum | nucleus, plasma membrane, plastid | 6.11 | 6.62 |
| TraesCS7B01G290800.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 5.88 | 6.37 |
| TraesCS7D01G384800.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 5.88 | 6.34 |
| TraesCS7A01G388900.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 5.88 | 6.34 |
| HORVU0Hr1G022000.9 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX94089 | EnsemblPlantsGene:GSBRNA2T00156997001 | GO:A0A078E093 | PANTHER:PTHR33709 | PANTHER:PTHR33709:SF2 | ProteinID:CDX94089 |
| ProteinID:CDX94089.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EE743D | MapMan:35.1 | : |
Description
BnaC07g37230D
Coordinates
chrLK031879:-:621961..624175
Molecular Weight (calculated)
47211.0 Da
IEP (calculated)
10.367
GRAVY (calculated)
-0.145
Length
442 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGRIQSHQL PNGLYVSGKL EQPKDRPPTM AARAVPYTGG DIKNSGELGR MFDISLLDPQ GPPPPPLIVG GNSSGGNSRQ HAPPRVSGSS SNPNSGSVRS
101: GPNSGSMKKS SGPLSQLQPT GLITSGSLSG PIGSGSRRSG QMDRQVSNLG SSKAKYGSSV TCLNTDPVRV GFKVPKTVVW AVLIVAAMGL LVGAFLTVAV
201: KKPVVIAAVL AAVVPAVVVL VWNYVWGRKG LLSFIKKYPD AELRGAIDGQ FVKVTGVVTC GSIPLESSYQ RTPRCVYVST ELYEYKGLGG RSANPKHRCF
301: SWGSRHAERY VSDFHISDFQ SGLRALVKAG YGSKVSPFVK PATVANVTTQ NKDLSPSFLK WLSDRNLSAD NRVMRLKEGY IKEGSTVSVM GMVRRHDNVL
401: MIVPPAEPVS SGCRWWRCLL PTYADGLIIT CDDNQNADVI PV
101: GPNSGSMKKS SGPLSQLQPT GLITSGSLSG PIGSGSRRSG QMDRQVSNLG SSKAKYGSSV TCLNTDPVRV GFKVPKTVVW AVLIVAAMGL LVGAFLTVAV
201: KKPVVIAAVL AAVVPAVVVL VWNYVWGRKG LLSFIKKYPD AELRGAIDGQ FVKVTGVVTC GSIPLESSYQ RTPRCVYVST ELYEYKGLGG RSANPKHRCF
301: SWGSRHAERY VSDFHISDFQ SGLRALVKAG YGSKVSPFVK PATVANVTTQ NKDLSPSFLK WLSDRNLSAD NRVMRLKEGY IKEGSTVSVM GMVRRHDNVL
401: MIVPPAEPVS SGCRWWRCLL PTYADGLIIT CDDNQNADVI PV
001: MAGRIQSHQL PNGLYVSGKL EQPKERPPTM AARAVPYTGG DIKKSGELGR MFDISVVDSA SFQGPPPLIV GGNSSGGTSR LQAPPRVSGS SSNPNSGSVR
101: SGPNSGSVKK FSGPLSQLQP TGLITSGSLG SSGPILSGSR RSGQLDHQLS NLASSKPKYG SSVTSLNVDP VRVGFKVPKA MVWAVLIVAA MGLLVGAFLT
201: VAVKKPVVIA AVLAAVCPAI VVLVWNCVWR RKGLLSFIKK YPDAELRGAI DGQFVKVTGV VTCGSIPLES SFQRTPRCVY VSTELYEYKG FGGKSANPKH
301: RCFSWGSRHA EKYVSDFYIS DFQSGLRALV KAGYGSKVSP FVKPATVANV TTQNKDLSPS FLKWLSDRNL SADDRVMRLK EGYIKEGSTV SVMGMVRRHD
401: NVLMIVPPAE AVSSGCRWWH CLFPTYADGL IITCDDNQNA DVIPV
101: SGPNSGSVKK FSGPLSQLQP TGLITSGSLG SSGPILSGSR RSGQLDHQLS NLASSKPKYG SSVTSLNVDP VRVGFKVPKA MVWAVLIVAA MGLLVGAFLT
201: VAVKKPVVIA AVLAAVCPAI VVLVWNCVWR RKGLLSFIKK YPDAELRGAI DGQFVKVTGV VTCGSIPLES SFQRTPRCVY VSTELYEYKG FGGKSANPKH
301: RCFSWGSRHA EKYVSDFYIS DFQSGLRALV KAGYGSKVSP FVKPATVANV TTQNKDLSPS FLKWLSDRNL SADDRVMRLK EGYIKEGSTV SVMGMVRRHD
401: NVLMIVPPAE AVSSGCRWWH CLFPTYADGL IITCDDNQNA DVIPV
Arabidopsis Description
At4g22290 [Source:UniProtKB/TrEMBL;Acc:Q8L6X7]
SUBAcon: [plasma membrane,plastid,cytosol]
SUBAcon: [plasma membrane,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.