Factsheet for Solyc04g014680.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
mitochondrion 2
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	mitochondrion
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400060565	Potato	plastid	90.55	76.31
KRH11512	Soybean	plastid	67.05	69.78
KRH36527	Soybean	plastid	66.13	68.33
Solyc11g012040.1.1	Tomato	plastid	66.59	66.74
AT4G22290.1	Thale cress	cytosol, plasma membrane, plastid	64.52	62.92
CDX94089	Canola	cytosol, plasma membrane, plastid	62.21	61.09
CDX82929	Canola	cytosol, plasma membrane, plastid	61.98	61.0
Bra013607.1-P	Field mustard	cytosol, plasma membrane, plastid	62.21	60.95
Bra019387.1-P	Field mustard	cytosol, plasma membrane, plastid	61.98	60.86
CDX98741	Canola	cytosol, plasma membrane, plastid	61.75	60.77
CDX79143	Canola	cytosol, plasma membrane, plastid	61.98	60.72
CDY16692	Canola	cytosol, plasma membrane, plastid	55.99	56.78
Bra029474.1-P	Field mustard	cytosol, plasma membrane, plastid	51.61	56.28
CDX94532	Canola	cytosol, plasma membrane, plastid	55.3	56.21
Solyc12g017450.1.1	Tomato	cytosol, plasma membrane, plastid	54.15	49.79
Solyc03g123920.2.1	Tomato	plastid	46.77	45.82
Solyc01g096300.2.1	Tomato	endoplasmic reticulum, plasma membrane, plastid	24.19	37.5

Protein Annotations

EnsemblPlants:Solyc04g014680.2.1	EnsemblPlantsGene:Solyc04g014680.2	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	PANTHER:PTHR33709
PANTHER:PTHR33709:SF2	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002766616	UniProt:K4BPX1	MapMan:35.1

Description

No Description!

Coordinates

chr4:-:4937457..4942883

Molecular Weight (calculated)

46780.8 Da

IEP (calculated)

10.153

GRAVY (calculated)

-0.093

Length

434 amino acids

Sequence
(BLAST)

001: MGSRTGSHQL SNGLIVSGRP EQLKERQPTM GSRAVPYTGG DIKKSGELGK MYGVGDYPGP PPILKPSSRG SSASQHNSGS VRSGPNSGPV GHKLTNSGSM
101: PKKSSGSFSG QLMTPIQPTG LITSGPLSSN TGRRSGQLEP AASFKKVVYG SSVTSLNDEI KLGFKVSKVA MWVFLVVVLM GLVVGAFLMV AVKKAVILVA
201: VAGILAPLVV ILLWNFAYKE RGLLGYLKRY PDAELRGAID GQFVKVTGVV TCGSIPLETS FQRTARCVYA STELDEYKGW GGKSANPSHR CFSWGRRHSE
301: KHVADFYISD FQSGLRAMVK AGYGAKVVPF VKPTTVIDVT KNNKELSPNF LHWLADRSLS SDDRIMRLKE GYIKEGSTVS VMGLVRRHEN ILMIVPPVDP
401: ISTGCQWTRC LLPTYIEGLI LTCDDSQNAD VIPV

Best Arabidopsis Sequence Match ( AT4G22290.1 )
(BLAST)

001: MAGRIQSHQL PNGLYVSGKL EQPKERPPTM AARAVPYTGG DIKKSGELGR MFDISVVDSA SFQGPPPLIV GGNSSGGTSR LQAPPRVSGS SSNPNSGSVR
101: SGPNSGSVKK FSGPLSQLQP TGLITSGSLG SSGPILSGSR RSGQLDHQLS NLASSKPKYG SSVTSLNVDP VRVGFKVPKA MVWAVLIVAA MGLLVGAFLT
201: VAVKKPVVIA AVLAAVCPAI VVLVWNCVWR RKGLLSFIKK YPDAELRGAI DGQFVKVTGV VTCGSIPLES SFQRTPRCVY VSTELYEYKG FGGKSANPKH
301: RCFSWGSRHA EKYVSDFYIS DFQSGLRALV KAGYGSKVSP FVKPATVANV TTQNKDLSPS FLKWLSDRNL SADDRVMRLK EGYIKEGSTV SVMGMVRRHD
401: NVLMIVPPAE AVSSGCRWWH CLFPTYADGL IITCDDNQNA DVIPV

Arabidopsis Description

At4g22290 [Source:UniProtKB/TrEMBL;Acc:Q8L6X7]
SUBAcon: [plasma membrane,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.