Factsheet for Bra019387.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 1
plastid 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98741	Canola	cytosol, plasma membrane, plastid	92.76	92.97
Bra013607.1-P	Field mustard	cytosol, plasma membrane, plastid	92.53	92.33
AT4G22290.1	Thale cress	cytosol, plasma membrane, plastid	84.62	84.04
Bra029474.1-P	Field mustard	cytosol, plasma membrane, plastid	65.16	72.36
KRH11512	Soybean	plastid	62.67	66.43
KRH36527	Soybean	plastid	61.09	64.29
Solyc04g014680.2.1	Tomato	plastid	60.86	61.98
Solyc11g012040.1.1	Tomato	plastid	55.2	56.35
PGSC0003DMT400034711	Potato	mitochondrion, plastid	55.2	56.35
PGSC0003DMT400060565	Potato	plastid	61.76	53.01
Bra026021.1-P	Field mustard	plastid	50.0	47.42
Bra016629.1-P	Field mustard	plastid	50.23	47.23
Bra008384.1-P	Field mustard	plastid	40.5	42.72
GSMUA_Achr5P19960_001	Banana	extracellular, plasma membrane, vacuole	24.66	37.72
Bra035072.1-P	Field mustard	plasma membrane	46.38	36.87
Os04t0541900-00	Rice	cytosol, golgi, peroxisome	26.24	36.48
Zm00001d025966_P001	Maize	golgi, peroxisome, plasma membrane	26.02	35.94
VIT_15s0048g02880.t01	Wine grape	plasma membrane	26.47	35.78
EES11199	Sorghum	cytosol, endoplasmic reticulum, golgi	26.47	35.35
TraesCS2B01G407700.1	Wheat	golgi, peroxisome, vacuole	25.11	34.69
TraesCS2D01G387400.1	Wheat	golgi, plasma membrane, vacuole	24.66	34.49
TraesCS2A01G389500.1	Wheat	golgi, plasma membrane, vacuole	24.66	34.28
HORVU2Hr1G092730.3	Barley	endoplasmic reticulum	21.72	32.65
Zm00001d046644_P001	Maize	nucleus, plasma membrane, plastid	5.66	7.04
KXG20435	Sorghum	nucleus, plasma membrane, plastid	6.11	6.62
TraesCS7B01G290800.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	5.88	6.37
TraesCS7D01G384800.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	5.88	6.34
TraesCS7A01G388900.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	5.88	6.34
HORVU0Hr1G022000.9	Barley	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Bra019387.1	EnsemblPlants:Bra019387.1-P	EnsemblPlantsGene:Bra019387	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR33709	PANTHER:PTHR33709:SF2	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002540D8C	UniProt:M4DS94
MapMan:35.1	:	:	:	:	:

Description

AT4G22290 (E=1e-187) | ubiquitin thiolesterase

Coordinates

chrA03:-:24515706..24517579

Molecular Weight (calculated)

47228.0 Da

IEP (calculated)

10.313

GRAVY (calculated)

-0.138

Length

442 amino acids

Sequence
(BLAST)

001: MAGRIQSHQL PNGLYVSGKL EQPKDRPPTM AARAVPYTGG DIKNSGELGR MFDISLLDPQ GPPPPQLIVG GNSSGGNSRQ HAPPRVSGSS SNPNSGSVRS
101: GPNSGSMKKS SGPLSQLQPT GLITSGSLSS PIGSGSRRSG QMDRQVSNLG SSKAKYGSSV TCLNTDPVRV GFKVPKTVVW AVLIVAAMGL LVGAFLTVAV
201: KKPVVIAAVI AAVVPGVVVL VWNCVWGRKG LLSFIKKYPD AELRGAVDGQ FVKVTGVVTC GSIPLESSYQ RTPRCVYVST ELYEYKGLGG RSANTKHRCF
301: SWGSRHAERY VSDFYISDFQ SGLRALVKAG YGSKVSPFVK PATVANVTTQ NKDLSPSFLK WLSDRNLSAD NRIMRLKEGY IKEGSTVSVM GMVRRHDNVL
401: MIVPPAEPVS SGCRWWRCLL PTYADGLIIT CDDNQNADVI PV

Best Arabidopsis Sequence Match ( AT4G22290.1 )
(BLAST)

001: MAGRIQSHQL PNGLYVSGKL EQPKERPPTM AARAVPYTGG DIKKSGELGR MFDISVVDSA SFQGPPPLIV GGNSSGGTSR LQAPPRVSGS SSNPNSGSVR
101: SGPNSGSVKK FSGPLSQLQP TGLITSGSLG SSGPILSGSR RSGQLDHQLS NLASSKPKYG SSVTSLNVDP VRVGFKVPKA MVWAVLIVAA MGLLVGAFLT
201: VAVKKPVVIA AVLAAVCPAI VVLVWNCVWR RKGLLSFIKK YPDAELRGAI DGQFVKVTGV VTCGSIPLES SFQRTPRCVY VSTELYEYKG FGGKSANPKH
301: RCFSWGSRHA EKYVSDFYIS DFQSGLRALV KAGYGSKVSP FVKPATVANV TTQNKDLSPS FLKWLSDRNL SADDRVMRLK EGYIKEGSTV SVMGMVRRHD
401: NVLMIVPPAE AVSSGCRWWH CLFPTYADGL IITCDDNQNA DVIPV

Arabidopsis Description

At4g22290 [Source:UniProtKB/TrEMBL;Acc:Q8L6X7]
SUBAcon: [plasma membrane,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.