Factsheet for HORVU2Hr1G092730.3

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G387400.1	Wheat	golgi, plasma membrane, vacuole	78.23	72.78
TraesCS2B01G407700.1	Wheat	golgi, peroxisome, vacuole	78.23	71.88
TraesCS2A01G389500.1	Wheat	golgi, plasma membrane, vacuole	77.55	71.7
Os04t0541900-00	Rice	cytosol, golgi, peroxisome	69.73	64.47
EES11199	Sorghum	cytosol, endoplasmic reticulum, golgi	70.07	62.24
Zm00001d025966_P001	Maize	golgi, peroxisome, plasma membrane	64.97	59.69
GSMUA_Achr5P19960_001	Banana	extracellular, plasma membrane, vacuole	43.54	44.29
KRH11512	Soybean	plastid	33.67	23.74
KRH36527	Soybean	plastid	33.33	23.33
Bra029474.1-P	Field mustard	cytosol, plasma membrane, plastid	29.93	22.11
CDX94089	Canola	cytosol, plasma membrane, plastid	32.99	21.95
AT4G22290.1	Thale cress	cytosol, plasma membrane, plastid	32.99	21.8
CDX98741	Canola	cytosol, plasma membrane, plastid	32.65	21.77
Bra019387.1-P	Field mustard	cytosol, plasma membrane, plastid	32.65	21.72
HORVU7Hr1G061070.1	Barley	cytosol, plasma membrane, plastid	35.03	21.37
HORVU2Hr1G100660.2	Barley	cytosol, plasma membrane, plastid	34.69	21.12
CDY16692	Canola	cytosol, plasma membrane, plastid	30.61	21.03
CDX82929	Canola	cytosol, plasma membrane, plastid	31.29	20.86
CDX94532	Canola	cytosol, plasma membrane, plastid	30.27	20.84
CDX79143	Canola	cytosol, plasma membrane, plastid	31.29	20.77
Bra013607.1-P	Field mustard	cytosol, plasma membrane, plastid	31.29	20.77
HORVU2Hr1G100700.2	Barley	plastid	29.93	20.14
HORVU0Hr1G022000.9	Barley	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU2Hr1G092730.3	EnsemblPlantsGene:HORVU2Hr1G092730	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	PANTHER:PTHR33709
PANTHER:PTHR33709:SF1	SEG:seg	TMHMM:TMhelix	UniParc:UPI000B466A64	UniProt:A0A287IYR5	MapMan:35.1

Description

No Description!

Coordinates

chrchr2H:+:655110379..655113304

Molecular Weight (calculated)

28455.8 Da

IEP (calculated)

9.654

GRAVY (calculated)

0.270

Length

294 amino acids

Sequence
(BLAST)

001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXPRAASLA VAALLAVGIG LGVLVLAVVR SAVLLVLALV LSAAVSAFLL WNAAAAASGR VLRRFVDGLP
101: ASSLRVAADG QLVKITGMVS CGDISLISSY EKVENCVYTS TLLRKCGRWG SEVANPKNNC SRWKLTHAER FAADFYITDA KSGKRALVKA GYHTKVVPLI
201: DENVLVTTSR STDLSSTLKC WLEERNLSSE EAQLIRLEEG YITEGMRLSV IGILSKKNGD FMILPPREPI STVCFTETFI AWRKHLWLYL TRLN

Best Arabidopsis Sequence Match ( AT1G16860.1 )
(BLAST)

001: MGSRYPSHQL SNGLFVSGRP EQPKERAPTM SAVAMPYTGG DIKRSGELGK MFDIPADGTK SRKSGPIPGA PSRSGSFAGT AQSGPGAPMA TGRMSGSLAS
101: AGSVSMKKTN SGPLSKHGEP LKKSSGPQSG GVTRQNSGSI PILPATGLIT SGPITSGPLN SSGAPRKVSG PLDSSGLMKS HMPTVVHNQA VTTLGPEDDF
201: SCLKSFPKPV LWLVVLIFIM GFLAGGFILG AVHNPILLVV VAILFTVVAA LFIWNICWGR RGITDFIARY PDADLRTAKN GQHVKVTGVV TCGNVPLESS
301: FHRVPRCVYT STCLYEYRGW GSKPANSSHR HFTWGLRSSE RHVVDFYISD FQSGLRALVK TGSGAKVTPL VDDSVVIDFK QGSEQVSPDF VRWLGKKNLT
401: SDDRIMRLKE GYIKEGSTVS VIGVVQRNDN VLMIVPSSEP LAAGWQWRRC TFPTSLEGIV LRCEDSSNVD AIPV

Arabidopsis Description

Uncharacterized membrane protein At1g16860 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ45]
SUBAcon: [mitochondrion,plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.