Factsheet for TraesCS2A01G389500.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	golgi, plasma membrane, vacuole
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G387400.1	Wheat	golgi, plasma membrane, vacuole	96.54	97.15
TraesCS2B01G407700.1	Wheat	golgi, peroxisome, vacuole	96.54	95.94
Os04t0541900-00	Rice	cytosol, golgi, peroxisome	80.5	80.5
HORVU2Hr1G092730.3	Barley	endoplasmic reticulum	71.7	77.55
EES11199	Sorghum	cytosol, endoplasmic reticulum, golgi	77.99	74.92
Zm00001d025966_P001	Maize	golgi, peroxisome, plasma membrane	74.21	73.75
GSMUA_Achr5P19960_001	Banana	extracellular, plasma membrane, vacuole	43.71	48.1
PGSC0003DMT400000687	Potato	endoplasmic reticulum, plasma membrane, plastid	39.62	45.0
Solyc01g096300.2.1	Tomato	endoplasmic reticulum, plasma membrane, plastid	38.99	44.29
VIT_15s0048g02880.t01	Wine grape	plasma membrane	40.25	39.14
KRH11512	Soybean	plastid	33.65	25.66
KRH36527	Soybean	plastid	33.33	25.24
CDX94089	Canola	cytosol, plasma membrane, plastid	34.59	24.89
CDX98741	Canola	cytosol, plasma membrane, plastid	34.28	24.72
Bra019387.1-P	Field mustard	cytosol, plasma membrane, plastid	34.28	24.66
AT4G22290.1	Thale cress	cytosol, plasma membrane, plastid	33.96	24.27
TraesCS7A01G283600.2	Wheat	mitochondrion	37.11	23.65
Bra029474.1-P	Field mustard	cytosol, plasma membrane, plastid	29.56	23.62
CDX82929	Canola	cytosol, plasma membrane, plastid	32.7	23.58
CDX79143	Canola	cytosol, plasma membrane, plastid	32.7	23.48
Bra013607.1-P	Field mustard	cytosol, plasma membrane, plastid	32.7	23.48
TraesCS2A01G431500.2	Wheat	cytosol, plasma membrane, plastid	34.91	22.98
CDY16692	Canola	cytosol, plasma membrane, plastid	30.5	22.66
TraesCS2A01G431600.1	Wheat	cytosol, nucleus, plastid	31.13	22.65
CDX94532	Canola	cytosol, plasma membrane, plastid	30.19	22.48
TraesCS7A01G388900.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	0.94	0.73

Protein Annotations

EnsemblPlants:TraesCS2A01G389500.1	EnsemblPlantsGene:TraesCS2A01G389500	PANTHER:PTHR33709	PANTHER:PTHR33709:SF1	SEG:seg	TMHMM:TMhelix
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr2A:+:638033822..638035845

Molecular Weight (calculated)

33770.0 Da

IEP (calculated)

8.652

GRAVY (calculated)

0.278

Length

318 amino acids

Sequence
(BLAST)

001: MLPGGEDGKR RGATADADAE AGASAAALND LCATAGDAGR PVPAPFPRAA AWAVAALLAV GIGLGALVLA VVRSPVLLVL ALVLSAAVSA FLLWNAAAAA
101: SGRVLRRFVD GLPASSLRVA ADGQLVKITG LVSCGDISLI SSYEKVENCV YTSTLLRKCG RWGSEVANPK NNCSRWKLTH AERFAADFYI TDAKSGKRAL
201: VKAGYHTKVV PLIDENVLVT TSRSTDLSST LKCWLQERNL YSEEAQLIRL EEGYITEGMK LSVIGILSKK NGDFLIFPPR EPISTGCVLL SFLLPAYFDG
301: IVLRLVDKSY FMPHSGIS

Best Arabidopsis Sequence Match ( AT1G16860.1 )
(BLAST)

001: MGSRYPSHQL SNGLFVSGRP EQPKERAPTM SAVAMPYTGG DIKRSGELGK MFDIPADGTK SRKSGPIPGA PSRSGSFAGT AQSGPGAPMA TGRMSGSLAS
101: AGSVSMKKTN SGPLSKHGEP LKKSSGPQSG GVTRQNSGSI PILPATGLIT SGPITSGPLN SSGAPRKVSG PLDSSGLMKS HMPTVVHNQA VTTLGPEDDF
201: SCLKSFPKPV LWLVVLIFIM GFLAGGFILG AVHNPILLVV VAILFTVVAA LFIWNICWGR RGITDFIARY PDADLRTAKN GQHVKVTGVV TCGNVPLESS
301: FHRVPRCVYT STCLYEYRGW GSKPANSSHR HFTWGLRSSE RHVVDFYISD FQSGLRALVK TGSGAKVTPL VDDSVVIDFK QGSEQVSPDF VRWLGKKNLT
401: SDDRIMRLKE GYIKEGSTVS VIGVVQRNDN VLMIVPSSEP LAAGWQWRRC TFPTSLEGIV LRCEDSSNVD AIPV

Arabidopsis Description

Uncharacterized membrane protein At1g16860 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ45]
SUBAcon: [mitochondrion,plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.