Factsheet for Bra035072.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	plastid
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87427	Canola	mitochondrion, plastid, vacuole	82.73	98.29
CDX88486	Canola	mitochondrion, plastid, vacuole	82.19	97.65
AT1G78880.1	Thale cress	plastid	76.8	91.24
Bra008384.1-P	Field mustard	plastid	67.81	89.98
Bra016629.1-P	Field mustard	plastid	69.42	82.13
Bra026021.1-P	Field mustard	plastid	68.35	81.55
KRH46999	Soybean	plastid	60.79	70.71
KRH44657	Soybean	plastid	60.61	70.5
KRH09609	Soybean	plastid	59.17	69.56
Solyc03g123920.2.1	Tomato	plastid	55.04	69.07
PGSC0003DMT400023759	Potato	cytosol, mitochondrion, plasma membrane, plastid	59.35	69.04
KRH23708	Soybean	plastid	59.17	68.26
EES12814	Sorghum	plastid	58.45	67.57
Zm00001d026258_P001	Maize	cytosol, plastid, vacuole	58.09	67.01
VIT_09s0018g01240.t01	Wine grape	plastid	57.19	65.84
Os08t0230200-01	Rice	cytosol, plastid	57.19	65.84
Zm00001d050191_P003	Maize	plasma membrane	55.76	64.85
KXG24772	Sorghum	cytosol, plasma membrane, plastid	55.4	64.44
TraesCS2D01G429500.1	Wheat	cytosol, plasma membrane, plastid	55.04	63.35
TraesCS2A01G431500.2	Wheat	cytosol, plasma membrane, plastid	54.86	63.15
TraesCS2B01G453000.2	Wheat	cytosol, plasma membrane, plastid	54.86	63.15
Os04t0606500-01	Rice	plasma membrane	54.68	63.07
HORVU2Hr1G100660.2	Barley	cytosol, plasma membrane, plastid	54.68	62.94
HORVU7Hr1G061070.1	Barley	cytosol, plasma membrane, plastid	54.14	62.45
Zm00001d002391_P005	Maize	cytosol, plasma membrane, plastid	57.91	61.57
Zm00001d024364_P001	Maize	plasma membrane	54.68	61.41
TraesCS2D01G429600.1	Wheat	cytosol, nucleus, plastid	47.84	60.87
TraesCS2A01G431600.1	Wheat	cytosol, nucleus, plastid	47.66	60.64
TraesCS2B01G453100.1	Wheat	cytosol, nucleus, plastid	47.66	60.64
TraesCS7A01G283600.2	Wheat	mitochondrion	54.32	60.52
TraesCS7D01G282000.3	Wheat	mitochondrion	54.32	60.52
HORVU2Hr1G100700.2	Barley	plastid	46.76	59.5
TraesCS7B01G176900.2	Wheat	plasma membrane	54.86	58.21
Bra029474.1-P	Field mustard	cytosol, plasma membrane, plastid	34.17	47.74
Bra013607.1-P	Field mustard	cytosol, plasma membrane, plastid	37.23	46.73
Bra019387.1-P	Field mustard	cytosol, plasma membrane, plastid	36.87	46.38
GSMUA_Achr3P28220_001	Banana	mitochondrion	6.83	8.3
GSMUA_Achr4P20140_001	Banana	mitochondrion, plasma membrane, plastid	5.94	7.97

Protein Annotations

EnsemblPlants:Bra035072.1	EnsemblPlants:Bra035072.1-P	EnsemblPlantsGene:Bra035072	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR33709	PANTHER:PTHR33709:SF9	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002541C6B	UniProt:M4F1X5
MapMan:21.1.1.3.1	:	:	:	:	:

Description

AT1G78880 (E=3e-234) | balbiani ring 1-related / BR1-related

Coordinates

chrA07:-:22031670..22034346

Molecular Weight (calculated)

59895.6 Da

IEP (calculated)

10.003

GRAVY (calculated)

-0.178

Length

556 amino acids

Sequence
(BLAST)

001: MTATSKDSVL SFLSRLSNQK VKAFERFERE RAIERDKVAS VAAERDRDRE GGRVSSNGYG ISATRLLLSL FQLLSLISYF FLISFSNGDS WKLTLSLLSN
101: GLFVSGRPEQ PKEKPPTMSS VATPYTGGDI KKSGELGKMF DIPTDGTKSR KSGPITGASS RSGQQPGPGG PNATGRMSGS LASAGSNSMK KTNSGPLSKH
201: GEPLKKSSGP QSGNSGPIPI LPTTGLITSG PITSGPLNSS GAPRKISGPL DYSGSMKTHH HNNPSSVVHN QAVTTLAPED DFSCMKSFPK PVMWLVILIF
301: VMGFLAGGFI LGAVHNAILL IVVAVLFAAV AALFFWNVSC ERRGITDFVA RYPDADLRTA KNGQYVKVTG VVTCGNVPLE SSFHRVPRCV YTSTCLYEYR
401: GWGSKPANAS HRRFTWGLRS AERHVVDFYI SDFQSGLRAL VKTGNGAKVT PIVDDSVVID FKPGSEQASP DFVRWLGQKN LSNDERVMRL KEGYIKEGST
501: VSVIGVVQRN ESVLMIVPTT EPLAAGWQWS KCTFPASLEG IVLRCEDSSN VDAIPV

Best Arabidopsis Sequence Match ( AT1G78880.1 )
(BLAST)

001: MGSRYASHQL SNGLFVSGRP EQPKEKPPTM SSVAMPYTGG DIKKSGELGK MFDIPTDGTK SRKSGPITGG SSRSGAQSGP VPNATGRMSG NLASAGSNSM
101: KKTNSGPLSK HGEPLKKSSG PQSGGVTRQN SGPIPILPTT GLITSGPITS GPLNSSGAPR KISGPLDYSG SMKTHMPSVV HNQAVTTLAP EDDFSCMKSF
201: PKPVLWLVIL IFVMGFLAGG FILGAVHNAI LLIVVAVLFT VVAALFIWNI SCERRGITDF IARYPDADLR TAKNGQYVKV TGVVTCGNVP LESSFHRVPR
301: CVYTSTCLYE YRGWGSKPAN ASHRRFTWGL RSAERHVVDF YISDFQSGLR ALVKTGNGAK VTPLVDDSVV IDFKPGNEQA SPDFVRWLGK KNLTNDDRIM
401: RLKEGYIKEG STVSVIGVVQ RNDNVLMIVP TTEPLAAGWQ WSKCTFPASL EGIVLRCEDS SNVDAIPV

Arabidopsis Description

F9K20.7 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZVA7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.