Factsheet for Zm00001d002391_P005

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, plastid
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d026258_P001	Maize	cytosol, plastid, vacuole	90.44	98.13
EES12814	Sorghum	plastid	89.87	97.71
Os04t0606500-01	Rice	plasma membrane	80.69	87.55
Zm00001d050191_P003	Maize	plasma membrane	78.39	85.77
GSMUA_Achr9P22990_001	Banana	plastid	77.82	83.74
Zm00001d024364_P001	Maize	plasma membrane	79.16	83.64
TraesCS2D01G429600.1	Wheat	cytosol, nucleus, plastid	69.22	82.84
TraesCS2A01G431600.1	Wheat	cytosol, nucleus, plastid	68.07	81.46
TraesCS2B01G453100.1	Wheat	cytosol, nucleus, plastid	68.07	81.46
TraesCS2B01G453000.2	Wheat	cytosol, plasma membrane, plastid	75.14	81.37
HORVU2Hr1G100660.2	Barley	cytosol, plasma membrane, plastid	75.14	81.37
TraesCS2D01G429500.1	Wheat	cytosol, plasma membrane, plastid	74.95	81.16
TraesCS2A01G431500.2	Wheat	cytosol, plasma membrane, plastid	74.76	80.95
GSMUA_Achr7P04950_001	Banana	cytosol, plasma membrane, plastid	66.54	80.56
GSMUA_Achr1P10460_001	Banana	plastid	65.01	80.38
GSMUA_AchrUn_...	Banana	plastid	69.98	80.26
HORVU2Hr1G100700.2	Barley	plastid	66.16	79.18
GSMUA_Achr3P27840_001	Banana	plastid	72.47	77.98
VIT_11s0052g00020.t01	Wine grape	plastid	71.32	77.55
KRH46999	Soybean	plastid	70.36	76.99
GSMUA_Achr1P23590_001	Banana	plastid	67.69	76.62
KRH44657	Soybean	plastid	69.98	76.57
KRH09609	Soybean	plastid	68.83	76.11
KRH44603	Soybean	cytosol	19.31	75.37
KRH23708	Soybean	plastid	69.02	74.9
KRH47297	Soybean	cytosol, plasma membrane, plastid	67.88	73.35
AT1G78880.1	Thale cress	plastid	64.82	72.44
PGSC0003DMT400025018	Potato	cytosol, mitochondrion, plasma membrane, plastid	65.2	72.25
PGSC0003DMT400025021	Potato	cytosol, plasma membrane, plastid	65.01	72.03
Solyc12g017450.1.1	Tomato	cytosol, plasma membrane, plastid	65.01	72.03
KRH44594	Soybean	cytosol, plasma membrane, plastid	48.18	71.79
CDX96804	Canola	plastid	64.24	71.49
Bra016629.1-P	Field mustard	plastid	64.05	71.28
CDX83939	Canola	cytosol, plastid, vacuole	63.48	70.79
CDX88486	Canola	mitochondrion, plastid, vacuole	62.91	70.3
CDX87427	Canola	mitochondrion, plastid, vacuole	62.91	70.3
CDY35123	Canola	plastid	62.52	70.17
AT1G16860.1	Thale cress	cytosol, mitochondrion, plastid, vacuole	63.48	70.04
Bra026021.1-P	Field mustard	plastid	62.33	69.96
CDX83594	Canola	plastid	62.91	69.85
CDY14586	Canola	plastid	62.91	69.85
CDY40028	Canola	plastid	62.33	69.51
CDY26883	Canola	mitochondrion, plastid, vacuole	62.33	69.21
Bra008384.1-P	Field mustard	plastid	54.11	67.54
Bra035072.1-P	Field mustard	plasma membrane	61.57	57.91
Zm00001d025966_P001	Maize	golgi, peroxisome, plasma membrane	23.52	38.44
Zm00001d046644_P001	Maize	nucleus, plasma membrane, plastid	4.59	6.76

Protein Annotations

EnsemblPlants:Zm00001d002391_P005	EnsemblPlants:Zm00001d002391_T005	EnsemblPlantsGene:Zm00001d002391	EntrezGene:100280073	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0019538	PANTHER:PTHR33709	PANTHER:PTHR33709:SF4	ProteinID:ONM14175.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0008441DA6	UniProt:A0A1D6E098	MapMan:21.1.1.3.1	:

Description

Ubiquitin-specific protease family C19-related protein

Coordinates

chr2:-:11807233..11812111

Molecular Weight (calculated)

56492.6 Da

IEP (calculated)

9.686

GRAVY (calculated)

-0.154

Length

523 amino acids

Sequence
(BLAST)

001: MGSRFASHQL SNGLYVSGRP EQPKEKAPTI CSTAMPYTGG DIKKSGELGK MFDLHVEKSR KSGPLGNAPS RNTSFGGTAS NSGPVSNAGG RSNYSGSLSS
101: SVPGAGGSAR AKSNSGPLNK HGEPTKRSSG PQSGGVTPMA RQNSGPLPPV LPTTGLITSG PISSGPLNSS GAPRKVSGPL DSAASMKMRA TSFAHNQAVT
201: NLNTEDGYSI QGSFPKPILW AVILLFVMGF IAGGFILGAV HNAILLIVVV VIFGFVAALL IWNACWGSRG GIGFVSRYPD ADLRTAKDGQ YVKVTGVVTC
301: GNFPLESSFQ RVPRCVYTST GLYEYRGWDS KAANTEHRRF TWGLRSMEVS IFMTWNSEIY FIIFSGNPKL QLLSFSRPWP LMFLLHLWQR HAVDFYISDF
401: QSGLRALVKT GYGARVTPYV DESVIIDIDP DNKDMSPEFL RWLRERNLSS DDRTMRLKEG YIKEGSTVSV MGVVQRNDNV LMIVPPSEPI STGCQWAKCV
501: LPTNLDGLVL RCEDTSNIDV VPV

Best Arabidopsis Sequence Match ( AT1G16860.1 )
(BLAST)

001: MGSRYPSHQL SNGLFVSGRP EQPKERAPTM SAVAMPYTGG DIKRSGELGK MFDIPADGTK SRKSGPIPGA PSRSGSFAGT AQSGPGAPMA TGRMSGSLAS
101: AGSVSMKKTN SGPLSKHGEP LKKSSGPQSG GVTRQNSGSI PILPATGLIT SGPITSGPLN SSGAPRKVSG PLDSSGLMKS HMPTVVHNQA VTTLGPEDDF
201: SCLKSFPKPV LWLVVLIFIM GFLAGGFILG AVHNPILLVV VAILFTVVAA LFIWNICWGR RGITDFIARY PDADLRTAKN GQHVKVTGVV TCGNVPLESS
301: FHRVPRCVYT STCLYEYRGW GSKPANSSHR HFTWGLRSSE RHVVDFYISD FQSGLRALVK TGSGAKVTPL VDDSVVIDFK QGSEQVSPDF VRWLGKKNLT
401: SDDRIMRLKE GYIKEGSTVS VIGVVQRNDN VLMIVPSSEP LAAGWQWRRC TFPTSLEGIV LRCEDSSNVD AIPV

Arabidopsis Description

Uncharacterized membrane protein At1g16860 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ45]
SUBAcon: [mitochondrion,plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.