Factsheet for GSMUA_Achr1P23590_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
cytosol 1
plastid 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P04950_001	Banana	cytosol, plasma membrane, plastid	79.65	85.19
GSMUA_AchrUn_...	Banana	plastid	81.6	82.68
GSMUA_Achr1P10460_001	Banana	plastid	73.38	80.14
GSMUA_Achr9P22990_001	Banana	plastid	79.44	75.51
Zm00001d026258_P001	Maize	cytosol, plastid, vacuole	76.84	73.65
EES12814	Sorghum	plastid	76.41	73.39
VIT_11s0052g00020.t01	Wine grape	plastid	76.41	73.39
Os08t0230200-01	Rice	cytosol, plastid	75.32	72.05
GSMUA_Achr5P04950_001	Banana	cytosol, plasma membrane, plastid	70.35	71.12
GSMUA_Achr3P27840_001	Banana	plastid	74.46	70.78
HORVU7Hr1G061070.1	Barley	cytosol, plasma membrane, plastid	73.38	70.33
Zm00001d050191_P003	Maize	plasma membrane	72.73	70.29
Os04t0606500-01	Rice	plasma membrane	72.94	69.92
KXG24772	Sorghum	cytosol, plasma membrane, plastid	72.29	69.87
Zm00001d024364_P001	Maize	plasma membrane	72.73	67.88
TraesCS7A01G283600.2	Wheat	mitochondrion	73.16	67.74
Zm00001d002391_P005	Maize	cytosol, plasma membrane, plastid	76.62	67.69
GSMUA_Achr9P13890_001	Banana	plastid	56.71	67.53
TraesCS7D01G282000.3	Wheat	mitochondrion	72.73	67.33
PGSC0003DMT400025021	Potato	cytosol, plasma membrane, plastid	68.61	67.16
Solyc12g017450.1.1	Tomato	cytosol, plasma membrane, plastid	68.61	67.16
PGSC0003DMT400025018	Potato	cytosol, mitochondrion, plasma membrane, plastid	68.18	66.74
TraesCS2B01G453100.1	Wheat	cytosol, nucleus, plastid	62.99	66.59
TraesCS2D01G429600.1	Wheat	cytosol, nucleus, plastid	62.99	66.59
TraesCS2A01G431600.1	Wheat	cytosol, nucleus, plastid	62.34	65.9
TraesCS2B01G453000.2	Wheat	cytosol, plasma membrane, plastid	68.83	65.84
HORVU2Hr1G100660.2	Barley	cytosol, plasma membrane, plastid	68.61	65.63
TraesCS2D01G429500.1	Wheat	cytosol, plasma membrane, plastid	68.4	65.42
TraesCS2A01G431500.2	Wheat	cytosol, plasma membrane, plastid	68.18	65.22
TraesCS7B01G176900.2	Wheat	plasma membrane	73.16	64.5
HORVU2Hr1G100700.2	Barley	plastid	60.61	64.07
GSMUA_Achr5P19960_001	Banana	extracellular, plasma membrane, vacuole	24.03	38.41
GSMUA_Achr3P28220_001	Banana	mitochondrion	8.66	8.73
GSMUA_Achr4P20140_001	Banana	mitochondrion, plasma membrane, plastid	7.79	8.7

Protein Annotations

EnsemblPlants:GSMUA_Achr1P23590_001	EnsemblPlants:GSMUA_Achr1T23590_001	EnsemblPlantsGene:GSMUA_Achr1G23590_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR33709	PANTHER:PTHR33709:SF4	SEG:seg	TMHMM:TMhelix	UniParc:UPI000294CD2F	UniProt:M0S2G6
MapMan:21.1.1.3.1	:	:	:	:	:

Description

Uncharacterized membrane protein At1g16860 [Source:GMGC_GENE;Acc:GSMUA_Achr1G23590_001]

Coordinates

chr1:+:17981909..17984197

Molecular Weight (calculated)

50168.2 Da

IEP (calculated)

9.889

GRAVY (calculated)

-0.179

Length

462 amino acids

Sequence
(BLAST)

001: MGSRFPSHQL SNGLYVSGRP EQHKEKPPTI FSTAMPYTGG DIKKSGELGK MFDLHVEKSR KSGPLTNPPS RNRSLGAAAT HSGPIMPNAS GQPNYSGSSS
101: YAAPIKRASG PQSGGVTQVG RQNSGPLPPV LPTTGLITSG PISSGPLNSS GVTRKLSGSL ESTKSVKSHS ASVIQNQAVT NLTQEDDYLF KGSLPKPIIW
201: SVVLLFVMGF IAGGFILGAV HNVILLMVVV IIFGGVVMLS FWNTCFGRRA IIGFIARYPD VDLRTAKDGQ YVKVSGVVTC GNFPLQSSYH MVPRCVYTST
301: GLYEYRGWNS KTANSQHRRF TWGLRSKERH VVDFYISDFQ SGLRALVKAG YGSRVAPYVD ESVVIDMNPN NKDSSPEFLR WLQERNLSSD DRVMRLKEGY
401: VKEGSTVSVM GVVRKNDNVL MIVPPPEPFS TGCQWAKCVI PASLDGIILR CEDTSDVDVI PV

Best Arabidopsis Sequence Match ( AT1G78880.1 )
(BLAST)

001: MGSRYASHQL SNGLFVSGRP EQPKEKPPTM SSVAMPYTGG DIKKSGELGK MFDIPTDGTK SRKSGPITGG SSRSGAQSGP VPNATGRMSG NLASAGSNSM
101: KKTNSGPLSK HGEPLKKSSG PQSGGVTRQN SGPIPILPTT GLITSGPITS GPLNSSGAPR KISGPLDYSG SMKTHMPSVV HNQAVTTLAP EDDFSCMKSF
201: PKPVLWLVIL IFVMGFLAGG FILGAVHNAI LLIVVAVLFT VVAALFIWNI SCERRGITDF IARYPDADLR TAKNGQYVKV TGVVTCGNVP LESSFHRVPR
301: CVYTSTCLYE YRGWGSKPAN ASHRRFTWGL RSAERHVVDF YISDFQSGLR ALVKTGNGAK VTPLVDDSVV IDFKPGNEQA SPDFVRWLGK KNLTNDDRIM
401: RLKEGYIKEG STVSVIGVVQ RNDNVLMIVP TTEPLAAGWQ WSKCTFPASL EGIVLRCEDS SNVDAIPV

Arabidopsis Description

F9K20.7 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZVA7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.