Factsheet for GSMUA_Achr9P22990_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
cytosol 1
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P27840_001	Banana	plastid	88.68	88.68
EES12814	Sorghum	plastid	83.74	84.62
Zm00001d026258_P001	Maize	cytosol, plastid, vacuole	83.74	84.44
GSMUA_Achr1P10460_001	Banana	plastid	73.25	84.16
GSMUA_AchrUn_...	Banana	plastid	77.78	82.89
GSMUA_Achr7P04950_001	Banana	cytosol, plasma membrane, plastid	73.25	82.41
Os08t0230200-01	Rice	cytosol, plastid	81.69	82.19
VIT_11s0052g00020.t01	Wine grape	plastid	80.45	81.29
GSMUA_Achr1P23590_001	Banana	plastid	75.51	79.44
GSMUA_Achr5P04950_001	Banana	cytosol, plasma membrane, plastid	74.69	79.43
Os04t0606500-01	Rice	plasma membrane	78.4	79.05
KXG24772	Sorghum	cytosol, plasma membrane, plastid	77.16	78.45
Zm00001d002391_P005	Maize	cytosol, plasma membrane, plastid	83.74	77.82
Zm00001d050191_P003	Maize	plasma membrane	75.93	77.2
HORVU7Hr1G061070.1	Barley	cytosol, plasma membrane, plastid	76.34	76.97
GSMUA_Achr9P13890_001	Banana	plastid	61.11	76.55
Zm00001d024364_P001	Maize	plasma membrane	76.75	75.35
TraesCS2D01G429600.1	Wheat	cytosol, nucleus, plastid	67.28	74.83
PGSC0003DMT400025018	Potato	cytosol, mitochondrion, plasma membrane, plastid	72.63	74.79
PGSC0003DMT400025021	Potato	cytosol, plasma membrane, plastid	72.22	74.36
Solyc12g017450.1.1	Tomato	cytosol, plasma membrane, plastid	72.22	74.36
TraesCS7A01G283600.2	Wheat	mitochondrion	76.13	74.15
TraesCS7D01G282000.3	Wheat	mitochondrion	76.13	74.15
TraesCS2A01G431500.2	Wheat	cytosol, plasma membrane, plastid	73.66	74.12
TraesCS2D01G429500.1	Wheat	cytosol, plasma membrane, plastid	73.66	74.12
HORVU2Hr1G100660.2	Barley	cytosol, plasma membrane, plastid	73.46	73.91
TraesCS2A01G431600.1	Wheat	cytosol, nucleus, plastid	66.46	73.91
TraesCS2B01G453000.2	Wheat	cytosol, plasma membrane, plastid	73.46	73.91
TraesCS2B01G453100.1	Wheat	cytosol, nucleus, plastid	66.26	73.68
HORVU2Hr1G100700.2	Barley	plastid	65.02	72.31
TraesCS7B01G176900.2	Wheat	plasma membrane	76.54	70.99
GSMUA_Achr5P19960_001	Banana	extracellular, plasma membrane, vacuole	23.87	40.14
GSMUA_Achr3P28220_001	Banana	mitochondrion	9.05	9.61
GSMUA_Achr4P20140_001	Banana	mitochondrion, plasma membrane, plastid	7.61	8.94

Protein Annotations

EnsemblPlants:GSMUA_Achr9P22990_001	EnsemblPlants:GSMUA_Achr9T22990_001	EnsemblPlantsGene:GSMUA_Achr9G22990_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR33709	PANTHER:PTHR33709:SF4	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002950CCF	UniProt:M0U2Q8
MapMan:21.1.1.3.1	:	:	:	:	:

Description

Uncharacterized membrane protein At1g16860 [Source:GMGC_GENE;Acc:GSMUA_Achr9G22990_001]

Coordinates

chr9:-:27973370..27976120

Molecular Weight (calculated)

52149.6 Da

IEP (calculated)

9.868

GRAVY (calculated)

-0.155

Length

486 amino acids

Sequence
(BLAST)

001: MGSRFPSHQL SNGLYVSGRP EPPKEKPPTM SSTAMPYTGG DIKKSGELGK MFDLHVEKSR KSGPLNAPSR NTSFGGSASH SGPIMPNASG RSSYSGSLSS
101: AVPGAGPSLV TGCSNRQKSN SGPLKHGDPV KKSSGPQSGG VTPMARQNSG PLPPVLPATG LITSGPISSG PLNSSGAPRK VSGPLESAGS MKLHSASIVH
201: NQAVTKLSQD DDYSFNGSLP KPFLWCVGLL FVMGFIAGGF ILGAVHNAIL LIVVLVIFGI VAALFIWNAC FGRRAIIGFI ARYPDAELRT AKDGQYVKVS
301: GVVTCGNVPL ESSFHKVPRC VYTSTGLYEY RGWDSKAANS QHRRFSWGLR SLERHIVDFY ISDFQSGLRA LVKTGYGARV TPYVDESIVV DINPNKDMSP
401: DFLRWLRERN LSSDDRVMRL KEGYIKEGST VSVMGVVQRN DNVLMIVPPS ETFSTGCQWA RCILPVNLEG IVLRCEDTSK IDVIPV

Best Arabidopsis Sequence Match ( AT1G16860.1 )
(BLAST)

001: MGSRYPSHQL SNGLFVSGRP EQPKERAPTM SAVAMPYTGG DIKRSGELGK MFDIPADGTK SRKSGPIPGA PSRSGSFAGT AQSGPGAPMA TGRMSGSLAS
101: AGSVSMKKTN SGPLSKHGEP LKKSSGPQSG GVTRQNSGSI PILPATGLIT SGPITSGPLN SSGAPRKVSG PLDSSGLMKS HMPTVVHNQA VTTLGPEDDF
201: SCLKSFPKPV LWLVVLIFIM GFLAGGFILG AVHNPILLVV VAILFTVVAA LFIWNICWGR RGITDFIARY PDADLRTAKN GQHVKVTGVV TCGNVPLESS
301: FHRVPRCVYT STCLYEYRGW GSKPANSSHR HFTWGLRSSE RHVVDFYISD FQSGLRALVK TGSGAKVTPL VDDSVVIDFK QGSEQVSPDF VRWLGKKNLT
401: SDDRIMRLKE GYIKEGSTVS VIGVVQRNDN VLMIVPSSEP LAAGWQWRRC TFPTSLEGIV LRCEDSSNVD AIPV

Arabidopsis Description

Uncharacterized membrane protein At1g16860 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ45]
SUBAcon: [mitochondrion,plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.