Factsheet for Zm00001d024364_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 2
cytosol 1
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	nucleus

plasma membrane: 23508561
plasma membrane: 27341663

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 23508561 doi

Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck

Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG24772	Sorghum	cytosol, plasma membrane, plastid	91.52	94.77
Zm00001d050191_P003	Maize	plasma membrane	89.9	93.1
Os08t0230200-01	Rice	cytosol, plastid	85.86	87.99
Zm00001d026258_P001	Maize	cytosol, plastid, vacuole	83.03	85.27
HORVU7Hr1G061070.1	Barley	cytosol, plasma membrane, plastid	80.61	82.78
TraesCS7A01G283600.2	Wheat	mitochondrion	81.62	80.96
TraesCS7D01G282000.3	Wheat	mitochondrion	81.62	80.96
Zm00001d002391_P005	Maize	cytosol, plasma membrane, plastid	83.64	79.16
TraesCS7B01G176900.2	Wheat	plasma membrane	81.62	77.1
KRH44603	Soybean	cytosol	20.81	76.87
GSMUA_Achr9P22990_001	Banana	plastid	75.35	76.75
GSMUA_Achr7P04950_001	Banana	cytosol, plasma membrane, plastid	65.66	75.23
GSMUA_Achr1P10460_001	Banana	plastid	64.04	74.94
GSMUA_Achr3P27840_001	Banana	plastid	72.93	74.28
VIT_11s0052g00020.t01	Wine grape	plastid	71.31	73.39
GSMUA_AchrUn_...	Banana	plastid	67.27	73.03
GSMUA_Achr1P23590_001	Banana	plastid	67.88	72.73
KRH46999	Soybean	plastid	70.1	72.59
KRH44657	Soybean	plastid	69.7	72.18
KRH09609	Soybean	plastid	68.28	71.46
KRH23708	Soybean	plastid	69.09	70.95
Solyc12g017450.1.1	Tomato	cytosol, plasma membrane, plastid	66.67	69.92
PGSC0003DMT400025021	Potato	cytosol, plasma membrane, plastid	66.46	69.7
PGSC0003DMT400025018	Potato	cytosol, mitochondrion, plasma membrane, plastid	66.26	69.49
KRH47297	Soybean	cytosol, plasma membrane, plastid	67.47	69.01
AT1G78880.1	Thale cress	plastid	64.85	68.59
CDX96804	Canola	plastid	64.44	67.87
Bra016629.1-P	Field mustard	plastid	64.24	67.66
Bra026021.1-P	Field mustard	plastid	63.64	67.6
AT1G16860.1	Thale cress	cytosol, mitochondrion, plastid, vacuole	64.65	67.51
CDY35123	Canola	plastid	63.43	67.38
CDX83939	Canola	cytosol, plastid, vacuole	63.84	67.38
CDY40028	Canola	plastid	63.23	66.74
CDX87427	Canola	mitochondrion, plastid, vacuole	62.42	66.03
CDX83594	Canola	plastid	62.42	65.61
CDY14586	Canola	plastid	62.42	65.61
CDX88486	Canola	mitochondrion, plastid, vacuole	62.02	65.6
KRH44594	Soybean	cytosol, plasma membrane, plastid	46.46	65.53
CDY26883	Canola	mitochondrion, plastid, vacuole	61.82	64.97
Bra008384.1-P	Field mustard	plastid	52.93	62.53
Bra035072.1-P	Field mustard	plasma membrane	61.41	54.68
Zm00001d025966_P001	Maize	golgi, peroxisome, plasma membrane	23.43	36.25
Zm00001d046644_P001	Maize	nucleus, plasma membrane, plastid	5.05	7.04

Protein Annotations

EMBL:EU963081	EnsemblPlants:Zm00001d024364_P001	EnsemblPlants:Zm00001d024364_T001	EnsemblPlantsGene:Zm00001d024364	EntrezGene:100282999	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	PANTHER:PTHR33709	PANTHER:PTHR33709:SF4	ProteinID:AQK41079.1	ProteinID:AQK41080.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI000182C15E	UniProt:B6TDL6	MapMan:21.1.1.3.1	:

Description

Cysteine-type endopeptidase/ ubiquitin thiolesterase

Coordinates

chr10:+:67007013..67012130

Molecular Weight (calculated)

53258.8 Da

IEP (calculated)

9.849

GRAVY (calculated)

-0.182

Length

495 amino acids

Sequence
(BLAST)

001: MQKQHNHSKG LDQSFQSMGS RFPSHQLSNG LYVSGRPEQP KEKAPVICSS AMPYTGGDIK KSGELGKMFD LHRKSGPLGN PPSRNTSFGG AAANSGPVSN
101: AVGRSNYSGS ISSAVPGTGG SSRTKSNSGP LNKHGEPTKR LSGPQSSGVN PMARQNSGPL PPVLPTTGLI TSGPITSGQL NSSGAQRKVS GPLDSSVSMK
201: MRVTSFAHNP AVTNINVGDG YSIRGSIPTT IIWLVALLFL VGFVAGGFIL AAIHNPILLI VVVVIFGFVA TLVIWNICWG RRGVIGFISR YPDADLRTTK
301: DGEYVKVTGV VTCGNLPLES SFQRVPRCVY TSTCLYEYRG WDSKAANSTH HRFTWGLRSM ERHAVDFYIS DFQSGLRALV RTGSGARVSP YVDESVVIDI
401: NPDNKDMSPE FLRWLRGRNL SSDDRIMRLK EGYIKEGSTV SVMGVVQRNE NVLMIVPPAE PISTGCQWAK CILPTSLDGL VLRCEDTSDL DVVPV

Best Arabidopsis Sequence Match ( AT1G16860.1 )
(BLAST)

001: MGSRYPSHQL SNGLFVSGRP EQPKERAPTM SAVAMPYTGG DIKRSGELGK MFDIPADGTK SRKSGPIPGA PSRSGSFAGT AQSGPGAPMA TGRMSGSLAS
101: AGSVSMKKTN SGPLSKHGEP LKKSSGPQSG GVTRQNSGSI PILPATGLIT SGPITSGPLN SSGAPRKVSG PLDSSGLMKS HMPTVVHNQA VTTLGPEDDF
201: SCLKSFPKPV LWLVVLIFIM GFLAGGFILG AVHNPILLVV VAILFTVVAA LFIWNICWGR RGITDFIARY PDADLRTAKN GQHVKVTGVV TCGNVPLESS
301: FHRVPRCVYT STCLYEYRGW GSKPANSSHR HFTWGLRSSE RHVVDFYISD FQSGLRALVK TGSGAKVTPL VDDSVVIDFK QGSEQVSPDF VRWLGKKNLT
401: SDDRIMRLKE GYIKEGSTVS VIGVVQRNDN VLMIVPSSEP LAAGWQWRRC TFPTSLEGIV LRCEDSSNVD AIPV

Arabidopsis Description

Uncharacterized membrane protein At1g16860 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ45]
SUBAcon: [mitochondrion,plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.