CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 1
plastid 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH44594	Soybean	cytosol, plasma membrane, plastid	71.07	98.01
KRH44603	Soybean	cytosol	26.86	97.01
KRH44657	Soybean	plastid	81.41	82.43
KRH46999	Soybean	plastid	81.2	82.22
KRH09609	Soybean	plastid	79.34	81.18
VIT_09s0018g01240.t01	Wine grape	plastid	80.37	80.54
PGSC0003DMT400023759	Potato	cytosol, mitochondrion, plasma membrane, plastid	79.34	80.33
KRH23708	Soybean	plastid	79.34	79.67
Solyc03g123920.2.1	Tomato	plastid	71.49	78.1
EES12814	Sorghum	plastid	74.17	74.64
Zm00001d026258_P001	Maize	cytosol, plastid, vacuole	73.76	74.07
Os08t0230200-01	Rice	cytosol, plastid	73.35	73.5
KXG24772	Sorghum	cytosol, plasma membrane, plastid	70.04	70.92
Zm00001d050191_P003	Maize	plasma membrane	69.63	70.5
Os04t0606500-01	Rice	plasma membrane	69.01	69.29
HORVU7Hr1G061070.1	Barley	cytosol, plasma membrane, plastid	69.01	69.29
TraesCS2D01G429500.1	Wheat	cytosol, plasma membrane, plastid	68.39	68.53
TraesCS2B01G453000.2	Wheat	cytosol, plasma membrane, plastid	68.39	68.53
TraesCS2A01G431500.2	Wheat	cytosol, plasma membrane, plastid	68.18	68.32
TraesCS2B01G453100.1	Wheat	cytosol, nucleus, plastid	61.57	68.19
HORVU2Hr1G100660.2	Barley	cytosol, plasma membrane, plastid	67.98	68.12
Zm00001d002391_P005	Maize	cytosol, plasma membrane, plastid	73.35	67.88
TraesCS2D01G429600.1	Wheat	cytosol, nucleus, plastid	61.16	67.73
TraesCS2A01G431600.1	Wheat	cytosol, nucleus, plastid	60.95	67.51
Zm00001d024364_P001	Maize	plasma membrane	69.01	67.47
TraesCS7A01G283600.2	Wheat	mitochondrion	68.8	66.73
TraesCS7D01G282000.3	Wheat	mitochondrion	68.8	66.73
HORVU2Hr1G100700.2	Barley	plastid	59.09	65.45
TraesCS7B01G176900.2	Wheat	plasma membrane	69.21	63.93
KRH11512	Soybean	plastid	47.73	55.4
KRH36527	Soybean	plastid	47.31	54.52
GSMUA_Achr3P28220_001	Banana	mitochondrion	9.3	9.83
GSMUA_Achr4P20140_001	Banana	mitochondrion, plasma membrane, plastid	8.26	9.66

Protein Annotations

EMBL:ACUP02004145	EnsemblPlants:KRH47297	EnsemblPlantsGene:GLYMA_07G020800	EntrezGene:100500141	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	PANTHER:PTHR33709	PANTHER:PTHR33709:SF4	ProteinID:KRH47297	ProteinID:KRH47297.1	ProteinID:KRH47298.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0002338230	UniProt:I1KGQ1	MapMan:21.1.1.3.1	:

Description

hypothetical protein

Coordinates

chr7:-:1620922..1625829

Molecular Weight (calculated)

51712.2 Da

IEP (calculated)

10.202

GRAVY (calculated)

-0.180

Length

484 amino acids

Sequence
(BLAST)

001: MGSRIPSHKL SNGLYVSGRP EQPKERTPTM TSTAVPYTGG DIKKSGELGK MFDIPVDGSK SRKSGPITGA PSRTGSFGGA GSHSGPMQPN AAARATYTSG
101: PMTSGGMAGS TSMKKSNSGP LNKHGEPVKK SSGPQSGGVT PVGRQNSGPL APVLPTTGLI TSGPISSGPL NSSGAPRKVS GPLEATGSMK LQGSAAVHNQ
201: AVTVLSQGDD SFRRNFPKAV LWLLILLFVM GFIAGGFILG AVHNAILLIV VVILFGLVAA SFTWNTYWGR RSIMGFVTHY PDSELRTAKN GQFVKVSGVV
301: TCGNVPLESS FQKVPRCVYT STSLYEYRGW DSKAANPAHR RLTWGLRLLE RRVVDFYISD FQSGLRALVK TGHGARVTPY VDDSVLINVN PTKEELSPEF
401: LRWLGERNLS SDDRIMRLEE GYIKEGSTVS VMGVVQRNEN VLMIVPPPDP ITTGCQWTKC IFPSSLEGIV LRCEDASKND VIPV

Best Arabidopsis Sequence Match ( AT1G16860.1 )
(BLAST)

001: MGSRYPSHQL SNGLFVSGRP EQPKERAPTM SAVAMPYTGG DIKRSGELGK MFDIPADGTK SRKSGPIPGA PSRSGSFAGT AQSGPGAPMA TGRMSGSLAS
101: AGSVSMKKTN SGPLSKHGEP LKKSSGPQSG GVTRQNSGSI PILPATGLIT SGPITSGPLN SSGAPRKVSG PLDSSGLMKS HMPTVVHNQA VTTLGPEDDF
201: SCLKSFPKPV LWLVVLIFIM GFLAGGFILG AVHNPILLVV VAILFTVVAA LFIWNICWGR RGITDFIARY PDADLRTAKN GQHVKVTGVV TCGNVPLESS
301: FHRVPRCVYT STCLYEYRGW GSKPANSSHR HFTWGLRSSE RHVVDFYISD FQSGLRALVK TGSGAKVTPL VDDSVVIDFK QGSEQVSPDF VRWLGKKNLT
401: SDDRIMRLKE GYIKEGSTVS VIGVVQRNDN VLMIVPSSEP LAAGWQWRRC TFPTSLEGIV LRCEDSSNVD AIPV

Arabidopsis Description

Uncharacterized membrane protein At1g16860 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ45]
SUBAcon: [mitochondrion,plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.