CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, plastid
Any Predictor:	cytosol, mitochondrion, plasma membrane, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH47297	Soybean	cytosol, plasma membrane, plastid	98.01	71.07
KRH44657	Soybean	plastid	79.49	58.37
KRH46999	Soybean	plastid	79.49	58.37
KRH09609	Soybean	plastid	78.06	57.93
VIT_09s0018g01240.t01	Wine grape	plastid	78.92	57.35
PGSC0003DMT400023759	Potato	cytosol, mitochondrion, plasma membrane, plastid	77.21	56.69
KRH23708	Soybean	plastid	77.78	56.64
Solyc03g123920.2.1	Tomato	plastid	67.24	53.27
EES12814	Sorghum	plastid	72.36	52.81
Zm00001d026258_P001	Maize	cytosol, plastid, vacuole	72.08	52.49
Os08t0230200-01	Rice	cytosol, plastid	70.37	51.14
HORVU7Hr1G061070.1	Barley	cytosol, plasma membrane, plastid	66.67	48.55
Os04t0606500-01	Rice	plasma membrane	66.67	48.55
Zm00001d050191_P003	Maize	plasma membrane	66.1	48.54
KXG24772	Sorghum	cytosol, plasma membrane, plastid	66.1	48.54
Zm00001d002391_P005	Maize	cytosol, plasma membrane, plastid	71.79	48.18
TraesCS2B01G453000.2	Wheat	cytosol, plasma membrane, plastid	64.96	47.2
TraesCS2D01G429500.1	Wheat	cytosol, plasma membrane, plastid	64.96	47.2
HORVU2Hr1G100660.2	Barley	cytosol, plasma membrane, plastid	64.67	47.0
TraesCS2A01G431500.2	Wheat	cytosol, plasma membrane, plastid	64.67	47.0
TraesCS7D01G282000.3	Wheat	mitochondrion	66.38	46.69
TraesCS7A01G283600.2	Wheat	mitochondrion	66.38	46.69
Zm00001d024364_P001	Maize	plasma membrane	65.53	46.46
TraesCS2B01G453100.1	Wheat	cytosol, nucleus, plastid	56.7	45.54
TraesCS2D01G429600.1	Wheat	cytosol, nucleus, plastid	56.7	45.54
TraesCS2A01G431600.1	Wheat	cytosol, nucleus, plastid	56.13	45.08
TraesCS7B01G176900.2	Wheat	plasma membrane	66.67	44.66
HORVU2Hr1G100700.2	Barley	plastid	55.27	44.39
KRH11512	Soybean	plastid	42.17	35.49
KRH36527	Soybean	plastid	41.88	35.0
GSMUA_Achr3P28220_001	Banana	mitochondrion	12.82	9.83
GSMUA_Achr4P20140_001	Banana	mitochondrion, plasma membrane, plastid	11.4	9.66
KRH44603	Soybean	cytosol	0.0	0.0

Protein Annotations

EMBL:ACUP02004942	EnsemblPlants:KRH44594	EnsemblPlantsGene:GLYMA_08G2210002	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR33709	PANTHER:PTHR33709:SF4	ProteinID:KRH44594	ProteinID:KRH44594.1	ProteinID:KRH44595.1	ProteinID:KRH44596.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0006EDDCB1	UniProt:A0A0R0IVY3	MapMan:21.1.1.3.1	:

Description

hypothetical protein

Coordinates

chr8:+:17956847..17960560

Molecular Weight (calculated)

36744.2 Da

IEP (calculated)

10.978

GRAVY (calculated)

-0.168

Length

351 amino acids

Sequence
(BLAST)

001: MGSRIPSHKL SNGLYVSGRP EQPKERTPTM TSTAVPYTGG DIKKSGELGK MFDIPVDGSK SRKSGPITGA PSRTGSFGGA GSHSGPIQPN AAARAAYTTS
101: GPMTSGGMAG STSMKKSNSG PLNKHGEPVK KSSGPQSGGV TPVGRQNSGP LAPVLPTTGL ITSGPISSGP LNSSGAPRKV SGPLEATGSM KLQGSAAVHN
201: QAVTVLSQGD DSFRRNFPKA VLWLLILLFV MGFIAGGFIL GAVHNAILLI VVVVLFGLVA ASFTWNTYWG RRSIMGFVAH YPDSELRTAK NGQFVKVSGV
301: VTCGNVPLES SFQKVPRCVY TSTSLYEYRG WNSKAANPTH RRLTWGLRLL E

Best Arabidopsis Sequence Match ( AT1G16860.1 )
(BLAST)

001: MGSRYPSHQL SNGLFVSGRP EQPKERAPTM SAVAMPYTGG DIKRSGELGK MFDIPADGTK SRKSGPIPGA PSRSGSFAGT AQSGPGAPMA TGRMSGSLAS
101: AGSVSMKKTN SGPLSKHGEP LKKSSGPQSG GVTRQNSGSI PILPATGLIT SGPITSGPLN SSGAPRKVSG PLDSSGLMKS HMPTVVHNQA VTTLGPEDDF
201: SCLKSFPKPV LWLVVLIFIM GFLAGGFILG AVHNPILLVV VAILFTVVAA LFIWNICWGR RGITDFIARY PDADLRTAKN GQHVKVTGVV TCGNVPLESS
301: FHRVPRCVYT STCLYEYRGW GSKPANSSHR HFTWGLRSSE RHVVDFYISD FQSGLRALVK TGSGAKVTPL VDDSVVIDFK QGSEQVSPDF VRWLGKKNLT
401: SDDRIMRLKE GYIKEGSTVS VIGVVQRNDN VLMIVPSSEP LAAGWQWRRC TFPTSLEGIV LRCEDSSNVD AIPV

Arabidopsis Description

Uncharacterized membrane protein At1g16860 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ45]
SUBAcon: [mitochondrion,plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.