Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G453100.1 | Wheat | cytosol, nucleus, plastid | 95.88 | 95.88 |
| TraesCS2A01G431600.1 | Wheat | cytosol, nucleus, plastid | 95.65 | 95.65 |
| HORVU2Hr1G100700.2 | Barley | plastid | 91.08 | 91.08 |
| TraesCS2D01G429500.1 | Wheat | cytosol, plasma membrane, plastid | 88.1 | 79.71 |
| EES12814 | Sorghum | plastid | 83.07 | 75.47 |
| Zm00001d026258_P001 | Maize | cytosol, plastid, vacuole | 83.07 | 75.31 |
| Os04t0606500-01 | Rice | plasma membrane | 78.49 | 71.16 |
| KRH44603 | Soybean | cytosol | 21.28 | 69.4 |
| Zm00001d002391_P005 | Maize | cytosol, plasma membrane, plastid | 82.84 | 69.22 |
| TraesCS7D01G282000.3 | Wheat | mitochondrion | 77.35 | 67.74 |
| GSMUA_Achr9P22990_001 | Banana | plastid | 74.83 | 67.28 |
| GSMUA_AchrUn_... | Banana | plastid | 68.88 | 66.01 |
| GSMUA_Achr7P04950_001 | Banana | cytosol, plasma membrane, plastid | 64.76 | 65.51 |
| GSMUA_Achr1P10460_001 | Banana | plastid | 61.56 | 63.59 |
| GSMUA_Achr3P27840_001 | Banana | plastid | 70.71 | 63.58 |
| KRH46999 | Soybean | plastid | 69.11 | 63.18 |
| GSMUA_Achr1P23590_001 | Banana | plastid | 66.59 | 62.99 |
| KRH44657 | Soybean | plastid | 68.88 | 62.97 |
| VIT_11s0052g00020.t01 | Wine grape | plastid | 68.88 | 62.58 |
| KRH09609 | Soybean | plastid | 67.51 | 62.37 |
| KRH23708 | Soybean | plastid | 68.19 | 61.83 |
| KRH47297 | Soybean | cytosol, plasma membrane, plastid | 67.73 | 61.16 |
| AT1G78880.1 | Thale cress | plastid | 63.39 | 59.19 |
| CDX83594 | Canola | plastid | 63.62 | 59.02 |
| CDY14586 | Canola | plastid | 63.39 | 58.81 |
| Bra016629.1-P | Field mustard | plastid | 63.16 | 58.72 |
| CDX96804 | Canola | plastid | 63.16 | 58.72 |
| Solyc12g017450.1.1 | Tomato | cytosol, plasma membrane, plastid | 63.16 | 58.47 |
| PGSC0003DMT400025021 | Potato | cytosol, plasma membrane, plastid | 62.93 | 58.26 |
| PGSC0003DMT400025018 | Potato | cytosol, mitochondrion, plasma membrane, plastid | 62.93 | 58.26 |
| CDX83939 | Canola | cytosol, plastid, vacuole | 62.47 | 58.21 |
| CDY26883 | Canola | mitochondrion, plastid, vacuole | 62.7 | 58.17 |
| CDY35123 | Canola | plastid | 62.01 | 58.15 |
| CDX87427 | Canola | mitochondrion, plastid, vacuole | 62.24 | 58.12 |
| Bra026021.1-P | Field mustard | plastid | 61.78 | 57.94 |
| CDX88486 | Canola | mitochondrion, plastid, vacuole | 62.01 | 57.91 |
| AT1G16860.1 | Thale cress | cytosol, mitochondrion, plastid, vacuole | 62.47 | 57.59 |
| CDY40028 | Canola | plastid | 61.78 | 57.57 |
| KRH44594 | Soybean | cytosol, plasma membrane, plastid | 45.54 | 56.7 |
| Bra008384.1-P | Field mustard | plastid | 53.55 | 55.85 |
| Bra035072.1-P | Field mustard | plasma membrane | 60.87 | 47.84 |
| TraesCS2D01G387400.1 | Wheat | golgi, plasma membrane, vacuole | 23.34 | 32.28 |
| TraesCS7D01G384800.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 5.49 | 5.85 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G429600.1 | EnsemblPlantsGene:TraesCS2D01G429600 | PANTHER:PTHR33709 | PANTHER:PTHR33709:SF4 | SEG:seg | MapMan:35.1 |
Description
No Description!
Coordinates
chr2D:+:541545620..541548404
Molecular Weight (calculated)
46850.6 Da
IEP (calculated)
10.191
GRAVY (calculated)
-0.430
Length
437 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSRFPSHQL SNGLYVSGRP EQPKEKAPTI CSNVMPYTHG DLKKSGEFGK MFDLHADKSR KSGPLGNAPS SNTLFGGVAS NSGPVSNAGG RSNYSGSLSS
101: SVPGAGGSAR AKSNSGPFNK HREQAKWSSG PQSGGVTPMA RQNSGPLPPV LPTTGLITSG PHSSGPLNSS GAPRRKVSGS LDSAASMKVQ AASLAHNQAV
201: TTLTTESGFS VKGSISKLVL WGRRGVLGFV NSYPDTDLRT AKDGEYVKVT GVVTCGSFPL ESLFQRIPRC VYTSTRLYEY RGWDSKTANP KHRRFTWGLQ
301: TAERFAVDFY ISDFQSGLRA LVRTGSGARV TPYVDEPVVI DINPDNKDMS PEFLRWLRER NLSSDGRKMR LKEGYIKEGN TVSVMGVVQK SGSMLMIVPP
401: SEPVSSGCLW GKCLFPSKLD GLVLRCEDTS DMDVIPV
101: SVPGAGGSAR AKSNSGPFNK HREQAKWSSG PQSGGVTPMA RQNSGPLPPV LPTTGLITSG PHSSGPLNSS GAPRRKVSGS LDSAASMKVQ AASLAHNQAV
201: TTLTTESGFS VKGSISKLVL WGRRGVLGFV NSYPDTDLRT AKDGEYVKVT GVVTCGSFPL ESLFQRIPRC VYTSTRLYEY RGWDSKTANP KHRRFTWGLQ
301: TAERFAVDFY ISDFQSGLRA LVRTGSGARV TPYVDEPVVI DINPDNKDMS PEFLRWLRER NLSSDGRKMR LKEGYIKEGN TVSVMGVVQK SGSMLMIVPP
401: SEPVSSGCLW GKCLFPSKLD GLVLRCEDTS DMDVIPV
001: MGSRYPSHQL SNGLFVSGRP EQPKERAPTM SAVAMPYTGG DIKRSGELGK MFDIPADGTK SRKSGPIPGA PSRSGSFAGT AQSGPGAPMA TGRMSGSLAS
101: AGSVSMKKTN SGPLSKHGEP LKKSSGPQSG GVTRQNSGSI PILPATGLIT SGPITSGPLN SSGAPRKVSG PLDSSGLMKS HMPTVVHNQA VTTLGPEDDF
201: SCLKSFPKPV LWLVVLIFIM GFLAGGFILG AVHNPILLVV VAILFTVVAA LFIWNICWGR RGITDFIARY PDADLRTAKN GQHVKVTGVV TCGNVPLESS
301: FHRVPRCVYT STCLYEYRGW GSKPANSSHR HFTWGLRSSE RHVVDFYISD FQSGLRALVK TGSGAKVTPL VDDSVVIDFK QGSEQVSPDF VRWLGKKNLT
401: SDDRIMRLKE GYIKEGSTVS VIGVVQRNDN VLMIVPSSEP LAAGWQWRRC TFPTSLEGIV LRCEDSSNVD AIPV
101: AGSVSMKKTN SGPLSKHGEP LKKSSGPQSG GVTRQNSGSI PILPATGLIT SGPITSGPLN SSGAPRKVSG PLDSSGLMKS HMPTVVHNQA VTTLGPEDDF
201: SCLKSFPKPV LWLVVLIFIM GFLAGGFILG AVHNPILLVV VAILFTVVAA LFIWNICWGR RGITDFIARY PDADLRTAKN GQHVKVTGVV TCGNVPLESS
301: FHRVPRCVYT STCLYEYRGW GSKPANSSHR HFTWGLRSSE RHVVDFYISD FQSGLRALVK TGSGAKVTPL VDDSVVIDFK QGSEQVSPDF VRWLGKKNLT
401: SDDRIMRLKE GYIKEGSTVS VIGVVQRNDN VLMIVPSSEP LAAGWQWRRC TFPTSLEGIV LRCEDSSNVD AIPV
Arabidopsis Description
Uncharacterized membrane protein At1g16860 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ45]
SUBAcon: [mitochondrion,plastid,vacuole,cytosol]
SUBAcon: [mitochondrion,plastid,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.