Factsheet for GSMUA_Achr1P10460_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
mitochondrion 2
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P04950_001	Banana	cytosol, plasma membrane, plastid	80.85	79.17
GSMUA_AchrUn_...	Banana	plastid	79.67	73.9
GSMUA_Achr1P23590_001	Banana	plastid	80.14	73.38
GSMUA_Achr9P22990_001	Banana	plastid	84.16	73.25
GSMUA_Achr5P04950_001	Banana	cytosol, plasma membrane, plastid	77.78	71.99
Zm00001d026258_P001	Maize	cytosol, plastid, vacuole	80.61	70.75
VIT_11s0052g00020.t01	Wine grape	plastid	80.14	70.48
EES12814	Sorghum	plastid	80.14	70.48
GSMUA_Achr3P27840_001	Banana	plastid	80.38	69.96
Os08t0230200-01	Rice	cytosol, plastid	78.96	69.15
GSMUA_Achr9P13890_001	Banana	plastid	62.88	68.56
Solyc12g017450.1.1	Tomato	cytosol, plasma membrane, plastid	75.18	67.37
PGSC0003DMT400025021	Potato	cytosol, plasma membrane, plastid	74.94	67.16
PGSC0003DMT400025018	Potato	cytosol, mitochondrion, plasma membrane, plastid	74.7	66.95
KXG24772	Sorghum	cytosol, plasma membrane, plastid	75.41	66.74
Os04t0606500-01	Rice	plasma membrane	75.18	65.98
Zm00001d050191_P003	Maize	plasma membrane	74.0	65.48
HORVU7Hr1G061070.1	Barley	cytosol, plasma membrane, plastid	74.23	65.15
Zm00001d002391_P005	Maize	cytosol, plasma membrane, plastid	80.38	65.01
Zm00001d024364_P001	Maize	plasma membrane	74.94	64.04
TraesCS7D01G282000.3	Wheat	mitochondrion	74.0	62.73
TraesCS7A01G283600.2	Wheat	mitochondrion	74.0	62.73
TraesCS2A01G431600.1	Wheat	cytosol, nucleus, plastid	63.83	61.78
TraesCS2A01G431500.2	Wheat	cytosol, plasma membrane, plastid	70.45	61.7
TraesCS2D01G429500.1	Wheat	cytosol, plasma membrane, plastid	70.45	61.7
TraesCS2D01G429600.1	Wheat	cytosol, nucleus, plastid	63.59	61.56
HORVU2Hr1G100700.2	Barley	plastid	63.36	61.33
TraesCS2B01G453100.1	Wheat	cytosol, nucleus, plastid	63.36	61.33
TraesCS2B01G453000.2	Wheat	cytosol, plasma membrane, plastid	69.74	61.08
HORVU2Hr1G100660.2	Barley	cytosol, plasma membrane, plastid	69.74	61.08
TraesCS7B01G176900.2	Wheat	plasma membrane	74.47	60.11
GSMUA_Achr5P19960_001	Banana	extracellular, plasma membrane, vacuole	26.71	39.1
GSMUA_Achr4P20140_001	Banana	mitochondrion, plasma membrane, plastid	8.27	8.45
GSMUA_Achr3P28220_001	Banana	mitochondrion	8.98	8.3

Protein Annotations

EnsemblPlants:GSMUA_Achr1P10460_001	EnsemblPlants:GSMUA_Achr1T10460_001	EnsemblPlantsGene:GSMUA_Achr1G10460_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR33709	PANTHER:PTHR33709:SF4	SEG:seg	TMHMM:TMhelix	UniParc:UPI000294D00B	UniProt:M0RYQ5
MapMan:21.1.1.3.1	:	:	:	:	:

Description

Uncharacterized membrane protein At1g16860 [Source:GMGC_GENE;Acc:GSMUA_Achr1G10460_001]

Coordinates

chr1:-:7882624..7885331

Molecular Weight (calculated)

46136.6 Da

IEP (calculated)

9.597

GRAVY (calculated)

-0.097

Length

423 amino acids

Sequence
(BLAST)

001: MGSRFPSHQL SNGLYVSGRP EQPKEKPPTM SSIAMPYTGG DIKKSGELGK MFDLHMEKSR KSGPLPSAPL RNGSFGVPVS NSSNSGPLPP PLPATGLITS
101: GPINSGPLNS SSVPHKVSGP LNSIGSVKLH NTTVVHNQAV TNLGQEEDYS FKGSLPKPIL WSVVLLFVMG FIAGGFILGA VHNAVLLIVV VIIFGAVSSL
201: FIWNTCFGRR AIIGFISQYP DAELKTAKDG QYVKVTGVVT CGNFPLESSY SKVPRCVYTS TSLYEYRGWD SKAANSKHRH FTWGLRSMER NVVDFYISDF
301: QSGLRALVKA GYGAQVTPYV DESIVFDINP DNKGFSPEFL RWLRKRNLSS DDRVMRLKEG YIKEGSTVSV MGIVRRNDNV LMIVPPSEPF STGCQWAKCI
401: LPANLEGIVL RCEDTSKIDV IPV

Best Arabidopsis Sequence Match ( AT1G16860.1 )
(BLAST)

001: MGSRYPSHQL SNGLFVSGRP EQPKERAPTM SAVAMPYTGG DIKRSGELGK MFDIPADGTK SRKSGPIPGA PSRSGSFAGT AQSGPGAPMA TGRMSGSLAS
101: AGSVSMKKTN SGPLSKHGEP LKKSSGPQSG GVTRQNSGSI PILPATGLIT SGPITSGPLN SSGAPRKVSG PLDSSGLMKS HMPTVVHNQA VTTLGPEDDF
201: SCLKSFPKPV LWLVVLIFIM GFLAGGFILG AVHNPILLVV VAILFTVVAA LFIWNICWGR RGITDFIARY PDADLRTAKN GQHVKVTGVV TCGNVPLESS
301: FHRVPRCVYT STCLYEYRGW GSKPANSSHR HFTWGLRSSE RHVVDFYISD FQSGLRALVK TGSGAKVTPL VDDSVVIDFK QGSEQVSPDF VRWLGKKNLT
401: SDDRIMRLKE GYIKEGSTVS VIGVVQRNDN VLMIVPSSEP LAAGWQWRRC TFPTSLEGIV LRCEDSSNVD AIPV

Arabidopsis Description

Uncharacterized membrane protein At1g16860 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ45]
SUBAcon: [mitochondrion,plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.