Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- plastid 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P13890_001 | Banana | plastid | 69.37 | 81.7 |
| GSMUA_Achr1P10460_001 | Banana | plastid | 71.99 | 77.78 |
| GSMUA_AchrUn_... | Banana | plastid | 75.71 | 75.88 |
| VIT_11s0052g00020.t01 | Wine grape | plastid | 78.77 | 74.84 |
| GSMUA_Achr9P22990_001 | Banana | plastid | 79.43 | 74.69 |
| GSMUA_Achr7P04950_001 | Banana | cytosol, plasma membrane, plastid | 70.02 | 74.07 |
| PGSC0003DMT400025021 | Potato | cytosol, plasma membrane, plastid | 74.84 | 72.46 |
| GSMUA_Achr3P27840_001 | Banana | plastid | 77.02 | 72.43 |
| Solyc12g017450.1.1 | Tomato | cytosol, plasma membrane, plastid | 74.18 | 71.82 |
| PGSC0003DMT400025018 | Potato | cytosol, mitochondrion, plasma membrane, plastid | 73.74 | 71.4 |
| GSMUA_Achr1P23590_001 | Banana | plastid | 71.12 | 70.35 |
| GSMUA_Achr5P19960_001 | Banana | extracellular, plasma membrane, vacuole | 23.85 | 37.72 |
| GSMUA_Achr4P20140_001 | Banana | mitochondrion, plasma membrane, plastid | 7.88 | 8.7 |
| GSMUA_Achr3P28220_001 | Banana | mitochondrion | 8.53 | 8.52 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P04950_001 | EnsemblPlants:GSMUA_Achr5T04950_001 | EnsemblPlantsGene:GSMUA_Achr5G04950_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR33709 | PANTHER:PTHR33709:SF4 | TMHMM:TMhelix | UniParc:UPI000295497A | UniProt:M0SVS4 | MapMan:21.1.1.3.1 |
Description
Uncharacterized membrane protein At1g16860 [Source:GMGC_GENE;Acc:GSMUA_Achr5G04950_001]
Coordinates
chr5:-:3635458..3638839
Molecular Weight (calculated)
49426.6 Da
IEP (calculated)
9.984
GRAVY (calculated)
-0.164
Length
457 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSRFPSHQL SSGLYVSGRP EQPKEKPPTM SSVAMPYTGG DIKKSGELGK MFDIPTDNSR SRKSGPITNA PTRTGTFGVS STGMPNRQKS NSGPLNKQID
101: SMKRSSGQQS GGTNPMARQN SGPLALPATG LITSGPVSSG HLNSSGAPRK VSGPLDSSGS AKLHNTLSVH NQAVTNISQE DGFSFKRTFP KPALWAVILL
201: FVMGFIAGGF ILGAVHNAII LIVVVALFGI VAALFIWNSC WGRKAMIRFI ACYPDAELRT AKDGQYVKVS GIVTCGNVPL ESSFEKVPRC VYTSTSLYEY
301: RGWDSKLANP QHRRFTWGLR SMERHVVDFY ISDFQSGLRA LVKTGCGAKV TPFVDESAVL DINPGRKDLS AEVLMWLAQR NLSSDDRVMR MKEGYIKEGS
401: TVSVMGVVRK NDNVLMIVPP SEPISTGCQW TSCILPANLD GIVLRCEDTS KLDVIPV
101: SMKRSSGQQS GGTNPMARQN SGPLALPATG LITSGPVSSG HLNSSGAPRK VSGPLDSSGS AKLHNTLSVH NQAVTNISQE DGFSFKRTFP KPALWAVILL
201: FVMGFIAGGF ILGAVHNAII LIVVVALFGI VAALFIWNSC WGRKAMIRFI ACYPDAELRT AKDGQYVKVS GIVTCGNVPL ESSFEKVPRC VYTSTSLYEY
301: RGWDSKLANP QHRRFTWGLR SMERHVVDFY ISDFQSGLRA LVKTGCGAKV TPFVDESAVL DINPGRKDLS AEVLMWLAQR NLSSDDRVMR MKEGYIKEGS
401: TVSVMGVVRK NDNVLMIVPP SEPISTGCQW TSCILPANLD GIVLRCEDTS KLDVIPV
001: MGSRYASHQL SNGLFVSGRP EQPKEKPPTM SSVAMPYTGG DIKKSGELGK MFDIPTDGTK SRKSGPITGG SSRSGAQSGP VPNATGRMSG NLASAGSNSM
101: KKTNSGPLSK HGEPLKKSSG PQSGGVTRQN SGPIPILPTT GLITSGPITS GPLNSSGAPR KISGPLDYSG SMKTHMPSVV HNQAVTTLAP EDDFSCMKSF
201: PKPVLWLVIL IFVMGFLAGG FILGAVHNAI LLIVVAVLFT VVAALFIWNI SCERRGITDF IARYPDADLR TAKNGQYVKV TGVVTCGNVP LESSFHRVPR
301: CVYTSTCLYE YRGWGSKPAN ASHRRFTWGL RSAERHVVDF YISDFQSGLR ALVKTGNGAK VTPLVDDSVV IDFKPGNEQA SPDFVRWLGK KNLTNDDRIM
401: RLKEGYIKEG STVSVIGVVQ RNDNVLMIVP TTEPLAAGWQ WSKCTFPASL EGIVLRCEDS SNVDAIPV
101: KKTNSGPLSK HGEPLKKSSG PQSGGVTRQN SGPIPILPTT GLITSGPITS GPLNSSGAPR KISGPLDYSG SMKTHMPSVV HNQAVTTLAP EDDFSCMKSF
201: PKPVLWLVIL IFVMGFLAGG FILGAVHNAI LLIVVAVLFT VVAALFIWNI SCERRGITDF IARYPDADLR TAKNGQYVKV TGVVTCGNVP LESSFHRVPR
301: CVYTSTCLYE YRGWGSKPAN ASHRRFTWGL RSAERHVVDF YISDFQSGLR ALVKTGNGAK VTPLVDDSVV IDFKPGNEQA SPDFVRWLGK KNLTNDDRIM
401: RLKEGYIKEG STVSVIGVVQ RNDNVLMIVP TTEPLAAGWQ WSKCTFPASL EGIVLRCEDS SNVDAIPV
Arabidopsis Description
F9K20.7 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZVA7]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.