Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- plastid 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P04950_001 | Banana | cytosol, plasma membrane, plastid | 81.7 | 69.37 |
| GSMUA_Achr1P10460_001 | Banana | plastid | 68.56 | 62.88 |
| GSMUA_AchrUn_... | Banana | plastid | 71.91 | 61.18 |
| GSMUA_Achr7P04950_001 | Banana | cytosol, plasma membrane, plastid | 68.04 | 61.11 |
| GSMUA_Achr9P22990_001 | Banana | plastid | 76.55 | 61.11 |
| VIT_11s0052g00020.t01 | Wine grape | plastid | 74.23 | 59.88 |
| GSMUA_Achr3P27840_001 | Banana | plastid | 73.97 | 59.05 |
| PGSC0003DMT400025021 | Potato | cytosol, plasma membrane, plastid | 71.39 | 58.69 |
| PGSC0003DMT400025018 | Potato | cytosol, mitochondrion, plasma membrane, plastid | 70.88 | 58.26 |
| Solyc12g017450.1.1 | Tomato | cytosol, plasma membrane, plastid | 70.88 | 58.26 |
| GSMUA_Achr1P23590_001 | Banana | plastid | 67.53 | 56.71 |
| GSMUA_Achr5P19960_001 | Banana | extracellular, plasma membrane, vacuole | 24.74 | 33.22 |
| GSMUA_Achr4P20140_001 | Banana | mitochondrion, plasma membrane, plastid | 9.02 | 8.45 |
| GSMUA_Achr3P28220_001 | Banana | mitochondrion | 9.02 | 7.64 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P13890_001 | EnsemblPlants:GSMUA_Achr9T13890_001 | EnsemblPlantsGene:GSMUA_Achr9G13890_001 | PANTHER:PTHR33709 | PANTHER:PTHR33709:SF4 | SEG:seg |
| UniParc:UPI0002969E71 | UniProt:M0U047 | MapMan:35.1 | : | : | : |
Description
Uncharacterized membrane protein At1g16860 [Source:GMGC_GENE;Acc:GSMUA_Achr9G13890_001]
Coordinates
chr9:-:8998739..9003472
Molecular Weight (calculated)
42353.8 Da
IEP (calculated)
10.159
GRAVY (calculated)
-0.377
Length
388 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSRFPSHQL SNGLYVSGRP EQPKKKPPSM SSVAMPYTGG DVKKSGELGK MFDIPTDKSS SNRLKSNSGP LNKQNDSMKK SSGQQSGGAN LMAGQSSGPL
101: PLRATGLITS GPVSSGPLNS SGTPRKVPGP LDFAGSAKIH IPSTVHKQAV TTIIREDKSS SKIALFIWNA CWGRRAMIRL IAHYPDAELR TAKDGQYVKV
201: SGIVTCGNVP LESSFEKIPR CVYTSTSLYE YRGWKSKPAN PQHRCFTWGL RSMERHVVDF YISDFQSGLR ALVKTGYGAK VTSYVDESIV FNVNPSKKDL
301: SPEFLGWLAQ RNLSSDDRIM RVKEGYIKEG STVSVMGVVR RNENVIMIIP PSEPVSTGCQ WTNCFLPVSL NGIVLRCEDT SKLDVVPV
101: PLRATGLITS GPVSSGPLNS SGTPRKVPGP LDFAGSAKIH IPSTVHKQAV TTIIREDKSS SKIALFIWNA CWGRRAMIRL IAHYPDAELR TAKDGQYVKV
201: SGIVTCGNVP LESSFEKIPR CVYTSTSLYE YRGWKSKPAN PQHRCFTWGL RSMERHVVDF YISDFQSGLR ALVKTGYGAK VTSYVDESIV FNVNPSKKDL
301: SPEFLGWLAQ RNLSSDDRIM RVKEGYIKEG STVSVMGVVR RNENVIMIIP PSEPVSTGCQ WTNCFLPVSL NGIVLRCEDT SKLDVVPV
001: MGSRYPSHQL SNGLFVSGRP EQPKERAPTM SAVAMPYTGG DIKRSGELGK MFDIPADGTK SRKSGPIPGA PSRSGSFAGT AQSGPGAPMA TGRMSGSLAS
101: AGSVSMKKTN SGPLSKHGEP LKKSSGPQSG GVTRQNSGSI PILPATGLIT SGPITSGPLN SSGAPRKVSG PLDSSGLMKS HMPTVVHNQA VTTLGPEDDF
201: SCLKSFPKPV LWLVVLIFIM GFLAGGFILG AVHNPILLVV VAILFTVVAA LFIWNICWGR RGITDFIARY PDADLRTAKN GQHVKVTGVV TCGNVPLESS
301: FHRVPRCVYT STCLYEYRGW GSKPANSSHR HFTWGLRSSE RHVVDFYISD FQSGLRALVK TGSGAKVTPL VDDSVVIDFK QGSEQVSPDF VRWLGKKNLT
401: SDDRIMRLKE GYIKEGSTVS VIGVVQRNDN VLMIVPSSEP LAAGWQWRRC TFPTSLEGIV LRCEDSSNVD AIPV
101: AGSVSMKKTN SGPLSKHGEP LKKSSGPQSG GVTRQNSGSI PILPATGLIT SGPITSGPLN SSGAPRKVSG PLDSSGLMKS HMPTVVHNQA VTTLGPEDDF
201: SCLKSFPKPV LWLVVLIFIM GFLAGGFILG AVHNPILLVV VAILFTVVAA LFIWNICWGR RGITDFIARY PDADLRTAKN GQHVKVTGVV TCGNVPLESS
301: FHRVPRCVYT STCLYEYRGW GSKPANSSHR HFTWGLRSSE RHVVDFYISD FQSGLRALVK TGSGAKVTPL VDDSVVIDFK QGSEQVSPDF VRWLGKKNLT
401: SDDRIMRLKE GYIKEGSTVS VIGVVQRNDN VLMIVPSSEP LAAGWQWRRC TFPTSLEGIV LRCEDSSNVD AIPV
Arabidopsis Description
Uncharacterized membrane protein At1g16860 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ45]
SUBAcon: [mitochondrion,plastid,vacuole,cytosol]
SUBAcon: [mitochondrion,plastid,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.