Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY16967 | Canola | cytosol | 61.32 | 16.8 |
| CDY23468 | Canola | cytosol | 60.38 | 16.75 |
| PGSC0003DMT400040085 | Potato | extracellular | 51.89 | 15.45 |
| HORVU0Hr1G016640.4 | Barley | cytosol, nucleus, peroxisome | 63.21 | 13.14 |
| TraesCS6B01G294300.1 | Wheat | peroxisome | 63.21 | 12.55 |
| Solyc03g097020.2.1 | Tomato | nucleus | 69.81 | 11.71 |
| HORVU0Hr1G032110.1 | Barley | cytosol, nucleus | 63.21 | 11.59 |
| Bra008582.1-P | Field mustard | plastid | 63.21 | 11.49 |
| Bra032021.1-P | Field mustard | plastid | 62.26 | 11.38 |
| CDY43155 | Canola | plastid | 62.26 | 11.38 |
| Bra021376.1-P | Field mustard | plastid | 61.32 | 11.02 |
| KRH24032 | Soybean | mitochondrion, nucleus | 62.26 | 10.7 |
| KRH29004 | Soybean | nucleus | 62.26 | 10.65 |
| GSMUA_Achr4P17050_001 | Banana | vacuole | 61.32 | 10.64 |
| AT5G16930.1 | Thale cress | plastid | 64.15 | 10.56 |
| HORVU6Hr1G067630.1 | Barley | endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 63.21 | 10.55 |
| TraesCS6D01G247700.1 | Wheat | peroxisome, plastid | 63.21 | 10.53 |
| TraesCS6A01G266900.1 | Wheat | peroxisome, plastid | 63.21 | 10.53 |
| CDY28733 | Canola | plastid | 62.26 | 10.51 |
| CDX85480 | Canola | plastid | 61.32 | 10.48 |
| CDX69409 | Canola | plastid | 63.21 | 10.47 |
| CDY38078 | Canola | plastid | 60.38 | 10.27 |
| Bra023590.1-P | Field mustard | plastid | 61.32 | 10.25 |
| CDY49920 | Canola | plastid | 61.32 | 10.17 |
| VIT_16s0039g02110.t01 | Wine grape | plasma membrane | 60.38 | 10.14 |
| Os02t0697600-01 | Rice | mitochondrion | 60.38 | 10.0 |
| Zm00001d017707_P003 | Maize | plastid | 60.38 | 9.94 |
| EES07415 | Sorghum | plastid | 60.38 | 9.86 |
| Zm00001d051535_P001 | Maize | plastid | 60.38 | 9.79 |
| AT3G03060.1 | Thale cress | plastid | 55.66 | 9.39 |
| PGSC0003DMT400055268 | Potato | cytosol | 22.64 | 6.88 |
| PGSC0003DMT400008178 | Potato | cytosol, mitochondrion, peroxisome | 6.6 | 6.09 |
| CDY16968 | Canola | cytosol, extracellular, plastid | 1.89 | 0.85 |
| PGSC0003DMT400055267 | Potato | mitochondrion | 0.0 | 0.0 |
| CDY23469 | Canola | plastid | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.2 | InterPro:ATPase_AAA_core | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
| GO:GO:0007005 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | UniProt:M0ZU76 | InterPro:P-loop_NTPase |
| PFAM:PF00004 | EnsemblPlantsGene:PGSC0003DMG401003154 | PGSC:PGSC0003DMG401003154 | EnsemblPlants:PGSC0003DMT400008177 | PANTHER:PTHR23075 | PANTHER:PTHR23075:SF3 |
| SUPFAM:SSF52540 | UniParc:UPI000296A7EF | : | : | : | : |
Description
Proteasome-activating nucleotidase [Source:PGSC_GENE;Acc:PGSC0003DMG401003154]
Coordinates
chr3:+:46768338..46768851
Molecular Weight (calculated)
11673.4 Da
IEP (calculated)
10.745
GRAVY (calculated)
0.013
Length
106 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSLKGANGG SATKSEKGFG DVILHPSLEK RIQQLANATA NTKAHQAPFR NMLFYGPPGT GKTMVARELA RRSVRSFFPF QLMSSDLYIF ILICVPFKIV
101: EVLHMG
101: EVLHMG
001: MAQKIAIGVI SALAASASLA PSKFAAADGP FTFSGFSTSP SASIPQQQGS TPPASESGKE PSVAGEESDA PPRIRNNNPR TTSAGFDPEA LERGAKALKG
101: INNSAHAKKV FESIKTREET RQAEFTAKAQ EFKAMQSQAE AERQRVIYEE QKKLAQHQAQ TKSQMARYED ELARKRMQAE NEAQRTRNQE LVKMQEESAI
201: RREVARRATE EEIQAQRRQT EREKAEIERE TIRVKAMAEA EGRARESKLS EDVNRRMLVD RANAEREKWV SAINTTFDHI GGGLRTILTD QNKLIVAVGG
301: LTALAAGIYT TREGAKVIWS YVDRILGQPS LIRESSRGKY PWSGSASRVL STLRGGGKES TSKTGKGFGD VILRPALEKR IEQLANATAN TKAHQAPFRN
401: ILFYGPPGTG KTMAARELAR RSGLDYALMT GGDVAPLGAQ AVTKIHQLFD WSKKSKRGLL LFIDEADAFL CERNKTYMSE AQRSALNALL FRTGDQSKDI
501: VLALATNRPG DLDSAVADRI DETLEFPLPG EEERFKLLNL YLEKYISKTN LKKPGLLQSL FKKEQQTIEI KGVTEDLLKE AAAKTKGFSG REIAKLMASV
601: QAAVYGSANC LLDANLFREV IDYKVAEHQQ RKKLAGTDAG NKKK
101: INNSAHAKKV FESIKTREET RQAEFTAKAQ EFKAMQSQAE AERQRVIYEE QKKLAQHQAQ TKSQMARYED ELARKRMQAE NEAQRTRNQE LVKMQEESAI
201: RREVARRATE EEIQAQRRQT EREKAEIERE TIRVKAMAEA EGRARESKLS EDVNRRMLVD RANAEREKWV SAINTTFDHI GGGLRTILTD QNKLIVAVGG
301: LTALAAGIYT TREGAKVIWS YVDRILGQPS LIRESSRGKY PWSGSASRVL STLRGGGKES TSKTGKGFGD VILRPALEKR IEQLANATAN TKAHQAPFRN
401: ILFYGPPGTG KTMAARELAR RSGLDYALMT GGDVAPLGAQ AVTKIHQLFD WSKKSKRGLL LFIDEADAFL CERNKTYMSE AQRSALNALL FRTGDQSKDI
501: VLALATNRPG DLDSAVADRI DETLEFPLPG EEERFKLLNL YLEKYISKTN LKKPGLLQSL FKKEQQTIEI KGVTEDLLKE AAAKTKGFSG REIAKLMASV
601: QAAVYGSANC LLDANLFREV IDYKVAEHQQ RKKLAGTDAG NKKK
Arabidopsis Description
AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXI0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.