Factsheet for TraesCS6A01G266900.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid

Predictor Summary:

plastid 2
mitochondrion 3
peroxisome 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome, plastid
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	peroxisome
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	peroxisome
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G247700.1	Wheat	peroxisome, plastid	99.53	99.53
TraesCS6B01G294300.1	Wheat	peroxisome	81.76	97.38
HORVU0Hr1G032110.1	Barley	cytosol, nucleus	86.32	94.98
HORVU0Hr1G016640.4	Barley	cytosol, nucleus, peroxisome	75.31	93.92
HORVU6Hr1G067630.1	Barley	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	93.24	93.39
CDY23468	Canola	cytosol	49.37	82.2
CDY16967	Canola	cytosol	48.43	79.59
Zm00001d017707_P003	Maize	plastid	76.42	75.47
EES07415	Sorghum	plastid	76.89	75.35
Os02t0697600-01	Rice	mitochondrion	75.0	74.53
Zm00001d051535_P001	Maize	plastid	74.84	72.78
VIT_16s0039g02110.t01	Wine grape	plasma membrane	69.97	70.52
GSMUA_Achr4P17050_001	Banana	vacuole	67.45	70.21
KRH24032	Soybean	mitochondrion, nucleus	67.77	69.85
CDY43155	Canola	plastid	63.68	69.83
Bra032021.1-P	Field mustard	plastid	63.52	69.66
KRH29004	Soybean	nucleus	67.45	69.19
Solyc03g097020.2.1	Tomato	nucleus	68.4	68.83
Bra021376.1-P	Field mustard	plastid	63.52	68.47
AT5G16930.1	Thale cress	plastid	69.03	68.17
AT3G03060.1	Thale cress	plastid	67.14	67.99
CDX69409	Canola	plastid	68.24	67.81
CDY28733	Canola	plastid	66.51	67.36
CDY49920	Canola	plastid	66.98	66.67
Bra008582.1-P	Field mustard	plastid	61.01	66.55
CDX85480	Canola	plastid	64.31	65.97
CDY38078	Canola	plastid	64.15	65.49
Bra023590.1-P	Field mustard	plastid	64.78	64.98
PGSC0003DMT400008177	Potato	cytosol	10.53	63.21
TraesCS6A01G273800.1	Wheat	mitochondrion	55.19	57.64
CDY16968	Canola	cytosol, extracellular, plastid	16.04	43.4
CDY23469	Canola	plastid	11.48	42.2
TraesCS6A01G311400.1	Wheat	mitochondrion, plastid	13.84	14.86

Protein Annotations

EnsemblPlants:TraesCS6A01G266900.1	EnsemblPlantsGene:TraesCS6A01G266900	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	InterPro:DUF3523	InterPro:P-loop_NTPase	ncoils:Coil
PANTHER:PTHR23075	PANTHER:PTHR23075:SF3	PFAM:PF00004	PFAM:PF12037	SEG:seg	SMART:SM00382
SUPFAM:SSF52540	TIGR:cd00009	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr6A:+:492701935..492706682

Molecular Weight (calculated)

70155.5 Da

IEP (calculated)

9.884

GRAVY (calculated)

-0.576

Length

636 amino acids

Sequence
(BLAST)

001: MAAAAAKVGA AVLSAGAALA ASSQRVNAEG GSGFRFPGFS SPAPAPAPAP APGGPPPAAP AAEEAPPKPR NDNPRTTAAG FDPDALERAV ELLREFEKRD
101: DADVKKSFAH ANKREETRQA EFAARKADYL KEAAQIELER TRVEYEEKKK LAQSQAEIKA QVARYEDELR RKRAQHEHEA QRARNQELVK MQEESAIKLE
201: QLRRQSEEEI NEIRRRTEKE KARIEQETMR LQKMADAEAK ALELQLSEDV KRRLLIERAN AEREKWVQAI NTTFEHIGGG LRTILTDQNK LVVAVGGATA
301: LAAGIYTTRE GARVVWGYVD RILGQPSLIR ESSRGKYPWS GVPSRAMSTV TSKLKNGSNL GKDGKGFGDV ILNPSLQKRV NQLANATANT KLHQAPFRNM
401: LFYGPPGTGK TMAARELARE SGLDYALMTG GDVAPLGSQA VTKIHQLFDW AKKSNRGLLL FIDEADAFLC ERNKTYMSEA QRSALNALLF RTGDQSKDIV
501: LALATNRPGD LDSAVADRID EVLEFPLPGE EERSKLVKLY LDKYIVKAGE KRKGLFSFFR RQPQKIAVKG ITDELIREAA AKTDGFSGRE IAKLMASVQA
601: AVYGSTECEL TPGLFREVVD YKVAEHQQRR KIAGHA

Best Arabidopsis Sequence Match ( AT5G16930.1 )
(BLAST)

001: MAQKIAIGVI SALAASASLA PSKFAAADGP FTFSGFSTSP SASIPQQQGS TPPASESGKE PSVAGEESDA PPRIRNNNPR TTSAGFDPEA LERGAKALKG
101: INNSAHAKKV FESIKTREET RQAEFTAKAQ EFKAMQSQAE AERQRVIYEE QKKLAQHQAQ TKSQMARYED ELARKRMQAE NEAQRTRNQE LVKMQEESAI
201: RREVARRATE EEIQAQRRQT EREKAEIERE TIRVKAMAEA EGRARESKLS EDVNRRMLVD RANAEREKWV SAINTTFDHI GGGLRTILTD QNKLIVAVGG
301: LTALAAGIYT TREGAKVIWS YVDRILGQPS LIRESSRGKY PWSGSASRVL STLRGGGKES TSKTGKGFGD VILRPALEKR IEQLANATAN TKAHQAPFRN
401: ILFYGPPGTG KTMAARELAR RSGLDYALMT GGDVAPLGAQ AVTKIHQLFD WSKKSKRGLL LFIDEADAFL CERNKTYMSE AQRSALNALL FRTGDQSKDI
501: VLALATNRPG DLDSAVADRI DETLEFPLPG EEERFKLLNL YLEKYISKTN LKKPGLLQSL FKKEQQTIEI KGVTEDLLKE AAAKTKGFSG REIAKLMASV
601: QAAVYGSANC LLDANLFREV IDYKVAEHQQ RKKLAGTDAG NKKK

Arabidopsis Description

AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXI0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.