CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	extracellular
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38078	Canola	plastid	94.19	93.74
Bra023590.1-P	Field mustard	plastid	95.65	93.53
CDY16967	Canola	cytosol	55.81	89.41
CDX69409	Canola	plastid	90.81	87.97
AT5G16930.1	Thale cress	plastid	86.13	82.92
CDY23468	Canola	cytosol	50.48	81.94
CDY16968	Canola	cytosol, extracellular, plastid	30.0	79.15
CDY43155	Canola	plastid	71.77	76.72
CDY49920	Canola	plastid	78.06	75.74
CDY28733	Canola	plastid	75.65	74.68
VIT_16s0039g02110.t01	Wine grape	plasma membrane	75.65	74.33
Solyc03g097020.2.1	Tomato	nucleus	73.06	71.68
KRH24032	Soybean	mitochondrion, nucleus	70.97	71.31
KRH29004	Soybean	nucleus	71.13	71.13
TraesCS6B01G294300.1	Wheat	peroxisome	60.81	70.6
HORVU0Hr1G016640.4	Barley	cytosol, nucleus, peroxisome	57.42	69.8
GSMUA_Achr4P17050_001	Banana	vacuole	67.42	68.41
HORVU0Hr1G032110.1	Barley	cytosol, nucleus	63.06	67.65
CDY23469	Canola	plastid	18.55	66.47
TraesCS6A01G266900.1	Wheat	peroxisome, plastid	65.97	64.31
TraesCS6D01G247700.1	Wheat	peroxisome, plastid	65.97	64.31
Os02t0697600-01	Rice	mitochondrion	65.97	63.91
HORVU6Hr1G067630.1	Barley	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	65.32	63.78
EES07415	Sorghum	plastid	65.32	62.4
PGSC0003DMT400008177	Potato	cytosol	10.48	61.32
Zm00001d017707_P003	Maize	plastid	63.55	61.18
CDY64607	Canola	plastid	58.06	60.3
Zm00001d051535_P001	Maize	plastid	63.55	60.24
CDX69234	Canola	cytosol, plastid	56.94	59.03
CDY36475	Canola	plastid	59.84	58.89
CDY30315	Canola	plastid	58.39	54.68
CDY51218	Canola	plastid	58.23	50.35
CDY29229	Canola	mitochondrion	28.87	48.77
CDX96098	Canola	mitochondrion	17.1	44.54
CDX68520	Canola	cytosol	4.84	19.48
CDX94544	Canola	mitochondrion	16.29	16.58
CDY16679	Canola	mitochondrion	4.84	15.38
CDY16678	Canola	cytosol	2.74	14.91
CDY71527	Canola	mitochondrion	5.97	14.07
CDX83073	Canola	endoplasmic reticulum	8.06	13.16
CDX68521	Canola	mitochondrion	2.58	11.03

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.2	GO:A0A078D8E1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	EnsemblPlants:CDX85480
ProteinID:CDX85480	ProteinID:CDX85480.1	ncoils:Coil	InterPro:DUF3523	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	EnsemblPlantsGene:GSBRNA2T00143179001	InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF12037
PANTHER:PTHR23075	PANTHER:PTHR23075:SF3	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI0004EF4696	SEG:seg

Description

BnaA02g03330D

Coordinates

chrLK031842:-:294283..297055

Molecular Weight (calculated)

68500.5 Da

IEP (calculated)

9.913

GRAVY (calculated)

-0.603

Length

620 amino acids

Sequence
(BLAST)

001: MAQKCAIGLI SALAASASFS KSNIASADGP PLTFSGFSTS PTPQPQQGSA TPPAPGSGEE SDAPPRIRND NPRTTSAGFD PEALERGAKT VKGINNSAHA
101: KKVFERIKTQ EETRQAEFAA KAQEFKALQS QAEAERQRVI HEEQKKLAQH QAQTKAQMAR YEDELARKRM QACHSTHTFL NKIEDLYSFL RRTRNQELVR
201: MQEESAIRRE GARRATEEEI QAQRRQTERE KAEIERETIR VKAMAEAEGR ARESKLSEDV NRRMLVDRAN AEREKWVSAI NTTFDHIGGG LRMILTDQNK
301: LVVAVGGITA LAAGIYTTRE GAKVIWSYVD RGGGKEAAST NGKGFGDVIL HPSLQKRIEQ LASATANTKS HQAPFRNMLF YGPPGTGKTM AARELARKSG
401: LDYALMTGGD VAPLGAQAVT KIHQLFDWSK KSKRGLLLFI DEADAFLCER NKTYMSEAQR SALNALLFRT GDQSKDIVLA LATNRPGDLD SAVADRVDET
501: LEFPLPGEEE RFKLLNLYLD KYITKTNLKK PGLLQSLFKK DQLKIEVKGV TEDLLKEAAA KTKGFSGREI AKLMASVQAA VYGSADCLLD ANLFREVIDY
601: KVAEHQQRKK LAGTDTGNKK

Best Arabidopsis Sequence Match ( AT5G16930.1 )
(BLAST)

001: MAQKIAIGVI SALAASASLA PSKFAAADGP FTFSGFSTSP SASIPQQQGS TPPASESGKE PSVAGEESDA PPRIRNNNPR TTSAGFDPEA LERGAKALKG
101: INNSAHAKKV FESIKTREET RQAEFTAKAQ EFKAMQSQAE AERQRVIYEE QKKLAQHQAQ TKSQMARYED ELARKRMQAE NEAQRTRNQE LVKMQEESAI
201: RREVARRATE EEIQAQRRQT EREKAEIERE TIRVKAMAEA EGRARESKLS EDVNRRMLVD RANAEREKWV SAINTTFDHI GGGLRTILTD QNKLIVAVGG
301: LTALAAGIYT TREGAKVIWS YVDRILGQPS LIRESSRGKY PWSGSASRVL STLRGGGKES TSKTGKGFGD VILRPALEKR IEQLANATAN TKAHQAPFRN
401: ILFYGPPGTG KTMAARELAR RSGLDYALMT GGDVAPLGAQ AVTKIHQLFD WSKKSKRGLL LFIDEADAFL CERNKTYMSE AQRSALNALL FRTGDQSKDI
501: VLALATNRPG DLDSAVADRI DETLEFPLPG EEERFKLLNL YLEKYISKTN LKKPGLLQSL FKKEQQTIEI KGVTEDLLKE AAAKTKGFSG REIAKLMASV
601: QAAVYGSANC LLDANLFREV IDYKVAEHQQ RKKLAGTDAG NKKK

Arabidopsis Description

AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXI0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.